The most viewed articles in the last three months among those published since 2024.
Genetic diversity among 20 Azerbaijani grape (
This research attempted to validate novel molecular markers linked to high antioxidant traits using an F2 population and a local Thai rice population. We performed total flavonoid content, total phenolic content (TPC), and ferric reducing antioxidant power (FRAP) assays to assess the antioxidant capacities of rice populations. In the F2 (“Pathum Thani 1”דHawm Mali Daeng”) population, these traits exhibited a quantitative distribution with high heritability (82.7%–98.3%) and high genetic advance (66%–94%). In validation using 10 molecular markers,
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Eight rice genotypes, including Binam, Hashemi, Deylamani, TH1, Hasani, Saleh, IR75479-199-3-3, and Gohar, were crossed in a line tester mating design to generate breeding populations, assess the general and specific combining ability (GCA and SCA) and identify suitable combinations for yield. 23 genotypes (15 F1s and eight parents) were evaluated in a randomized complete block design with three replications at the Rice Research Institute of Iran during the 2020 cropping season. Analysis of variance revealed significant genotype effects and GCA and SCA mean square values for all the investigated traits, which indicated the genetic diversity of the parental genotypes and the importance of both additive and non-additive gene effects in the inheritance of the studied traits. Results indicated that additive gene action controlled plant height. Meanwhile, non-additive gene action controlled panicle length, number of panicles per plant, heading date, hundred-grain weight, number of grains per panicle, and grain yield. Effects of general combining ability were significant for the panicle length, the number of panicles per plant, heading date, hundred-grain weight, number of grains per panicle, and plant height in all testers. Hasani and Saleh's genotypes demonstrated to be good general combiners for early maturity. Gohar was the best specific combiner to enhance yield components. Hashemi×Gohar was identified as the best combination for improving grain yield and reducing the number of days to heading. The predominance of non-additive types of gene actions related to grain yield and its components suggested that selecting the best plants should be postponed to advanced generation.
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Rice blast, caused by the pathogenic fungus
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CRISPR (clustered regularly interspaced short palindromic repeats) gene-edited (GEd) crops have demonstrated significant potential to enhance global food security in the face of escalating climate challenges and rapid population growth. Since 2019, for regulatory purposes, the United States (U.S.) and several other countries have recognized transgene-free, genome-edited lines as equivalent to conventionally bred varieties. Notably, the first genome-edited food product, Calyno™ soybean oil, was commercialized in the U.S. and marketed as a non-genetically modified organism (GMO) item. Recently, regulatory frameworks, such as the enactment of the Precision Breeding Law in the United Kingdom, the European Union’s New Genomic Techniques (NGT) legislation, and the repeal of the SECURE Rule in the United States, have further established guidelines permitting the use of genome-edited lines in agriculture similar to with conventionally bred crops, provided that these lines are free of transgenic elements. In Korea, researchers and policymakers are actively engaging in discussions to establish a preliminary review committee for GEd crops to align regulatory practices with international trade standards. Thus, this study aimed to evaluate two gene-edited rice lines for generational stability in terms of molecular characteristics, focusing on edited nucleotide sequences, gene expression, target phenotypes, the presence of transgene elements, and potential off-target effects across multiple generations. Additionally, several technical challenges in nucleotide editing tracing emerged during the evaluation process that warrant further attention. The findings presented in this study are expected to offer valuable insights for shaping the regulatory framework in Korea for CRISPR-based gene-edited crops.
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Tomato (
The development of rice seedlings stressed by drought and salt is shown by different morphometric and colorimetric traits. These distinctions can be used to understand the response of plants to challenging conditions. Therefore, this study aimed to assess the efficacy of image-based phenotyping in the early testing of rice plants and observe how the plants respond to both drought and salinity. A stress tolerance index with multivariate analysis was used for the selection of the most important traits. The experiment consisted of 2 factors, namely the degree of environmental stress and rice genotype. Furthermore, the degree of environmental stress comprised normal (NaCl and PEG 0%), drought (10% PEG), salinity (60 mM NaCl), as well as a combination of moderate drought and salinity (5% PEG + 30 mM NaCl). The results showed that both morphometric (area, convex hull, bounding area, perimeter, centermassy) and colorimetric (CIVE, VARI, RGBVI, MGRVI, NDI, GLI, NGRDI) can be used as selection characters.
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Rice yield is severely affected by phosphorus (P) deficiency, and plants have evolved various strategies to cope with this limitation. While some rice genotypes are adapted to low phosphate (Pi) availability, others remain sensitive to Pi deficiency. In this study, we conducted a genome-wide association study (GWAS) using a hydroponically cultivated population of 190 North Korean (NK) rice plants to identify genes associated with phosphorus use efficiency (PUE) and Pi deficiency tolerance. The rice plants were grown in Yoshida nutrient media with either full (10 mg/L) or low-P (1 mg/L) concentrations for 40 days. The phenotypic response to Pi deficiency was assessed at the seedling stage, followed by an evaluation of eight agricultural traits: chlorophyll content (SPAD), shoot length (SL), shoot fresh weight (SFW), shoot dry weight (SDW), root fresh weight (RFW), root dry weight (RDW), and tiller number (TN). The GWAS analysis revealed a total of 166 significant lead SNPs, with six located near known genes for Pi deficiency tolerance:
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Cadmium (Cd) contamination in rice poses significant health risks to consumers. This study aimed to reduce Cd accumulation in the elite Vietnamese rice variety TBR225 (TBR225) by editing the
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Garlic (
Winged bean (
Milk thistle (
Carbohydrates and genetic factors influence cell division in citrus fruits from ovule cultures. Here, we investigated the effects of various carbohydrate sources (sorbitol, maltose, galactose, and lactose) on cell proliferation, somatic embryogenesis, and plant regeneration in three
Cotton fiber development is a complex process regulated by multiple networks that involve various transcription factors (TFs). Recent studies (2020-2025) have elucidated the roles of TFs through silencing and overexpression experiments in cotton plants. We conducted a literature search in NCBI using the keywords ‘transcription factor, fiber elongation, cotton plant’ to identify relevant studies. This review focuses on studies published between 2020 and 2025 that were selected for review. We discussed various TFs and molecular mechanisms leading to altered fiber length. The research works included various analyses of transcription factors, genes, proteins, and metabolites as well as fiber quality results. The reviewed data highlight the complexity of fiber development networks, which involve extensive crosstalk among regulatory pathways. Despite the complexity, many novel TFs, modules, and tandems that participate in fiber elongation have been found. Their positive or negative regulatory roles in fiber formation stages promote a more profound understanding of fiber initiation and elongation.
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Bread wheat
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Pigmented rice is reported have high levels of bioactive compounds, it suitable for functional food. Additionally, it has been reported that pigmented rice extract has the potential as an anti-obesity, anti-inflammatory, antioxidant, and anti-cancer agent. In Indonesia, pigmented rice is less favored by local farmers due to low public demand (limited awareness) and cultivation difficulties (prone to falling and susceptible to pests), which could lead to the extinction of the plant. Qualitative and quantitative characterization can serve as the basis for plant breeding. This study aims to analyze the morpho-agronomic traits of several pigmented rice accessions from Central Java and East Java, thus providing a source of information for local farmers in the pigmented rice breeding process. Morpho-agronomic traits observed include qualitative and quantitative characters. The grouping and its relationship between 22 rice accessions were analyzed using Principal Component Analysis (PCA)-biplots and dendrogram clustering analysis based on Unweighted Pair Group Method Using Arithmetic Averages (UPGMA). The results showed the characteristics influencing the variation of Indonesian pigmented rice, especially from East Java and Central Java, out of 22 accessions, such as leaf color, shoot color, and tiller number. The grouping based on their morpho-agronomic characters showed that there were two main clusters. Twenty out of 22 rice accession grouping in cluster 1 with diverse pigmented rice pigment type. Meanwhile, cluster 2 consists of IR Ngawi Hitam and Wojaloka. These two accessions are classified as black rice. Our findings are valuable for breeding programs, especially in rice.
Black soybeans are valued for their rich nutritional content and potential health benefits, attributed to their functional components that enhance antioxidant activity. In this study, we evaluate and compare the isoflavone and anthocyanin content, as well as the antioxidant potential, of seven Korean black soybean genotypes. Isoflavone content ranged from 2,032.8 to 3,536.8 µg/g, with Soman displaying the highest levels of both aglycones and glucosides, indicating notable bioactive potential. In terms of anthocyanins, Danheuk had the highest total content (24,080.6 µg/g), while Soman excelled in Pelargonidin-3- glucoside (Pg3glc). Soman also showed superior antioxidant activity across all measures, including total polyphenol, flavonoid content, as well as radical scavenging abilities (ABTS and DPPH). Strong correlations were found between total flavonoid content, total polyphenol content, genistin, total isoflavone content and antioxidant activity, while correlations with total anthocyanins were relatively weaker. These findings reveal significant genetic variability in isoflavone and anthocyanin content among soybean genotypes, with Soman showing particularly high antioxidant potential, suggesting its value for health-related applications and soybean breeding programs.
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The genetic control of rice resistance has been extensively studied, but how the resistance mechanism is genetically controlled has received less attention. This study revealed that the rice resistance mechanism toward brown planthopper was genetically controlled by several genes with several mendelian patterns. The tolerance mechanism is controlled by three complementary genes; this is confirmed by QTL analysis, whereas the Antibiosis is controlled by three separate loci on chromosomes 2, 8, and 11. The antixenosis was controlled by polygenic, but detected locus only on chromosome 3, with minor effects.
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In this study, molecular-genetic analyses were carried out to identify resistance to yellow rust (
Microalgae offer a sustainable platform for biotechnology due to their rapid growth and ability to accumulate high-value metabolites such as lipids, proteins, and carbohydrates. This study investigates the biochemical and morphological responses of
Cotton is a globally important fiber crop, but many elite cultivars are recalcitrant to in vitro regeneration. We developed a callus-mediated plant regeneration protocol for the local
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Patchouli is a plant that produces essential oil. One problem with patchouli is that production remains low due to virus attacks. To address this issue, virus-free seedlings can be produced through tissue culture. This measure requires examining the effectiveness of patchouli regeneration in vitro through histological observations and acclimatization, in as much as effective propagation supports healthy seedlings. The purpose of this study was to determine the optimal propagation for Aceh patchouli via in vitro propagation, through histological observation. It investigated the optimal acclimatization for patchouli to assist patchouli adaptation. The study was carried out in several stages, starting from shoot multiplication, root induction, and acclimatization. Shoot multiplication was carried out on MS medium supplemented with BAP : 0.25 mg/L, 0.50 mg/L, 0.75 mg/L, 1.00 mg/L, 1.25 mg/L, and 1.50 mg/L. Root induction was carried out on MS medium supplemented with NAA : 0 mg/L, 0.2 mg/L, 0.4 mg/L, 0.6 mg/L, and 0.8 mg/L. Finally, the acclimatization was performed on compost under covering treatment. The results demonstrated that the best shoot multiplication, taking place in 6.3 days, was obtained through the 0.25 mg/L BAP treatment. This treatment resulted in the highest shoot proliferation, with a mean of 68.5 shoots per explant, as well as the greatest shoot height (5.1 cm). The best root induction was obtained from NAA 0.2 mg/L, producing a plant length (18.27 cm), plant height (9.60 cm), root length (8.67 cm), and plant fresh weight (1.49 g). During the acclimatization stage, the 12-day covering treatment produced the best seedlings, as evinced by plant length (25.8 cm), shoot height (19.5 cm), root length (7.9 cm), fresh weight (1.85 g), leaf width (3.0 cm), and a survival rate of 100%.
This study evaluates the phenolic content, antioxidant, and antibacterial properties of hydro-ethanolic extracts from six medicinal and aromatic plants in Morocco:
Black rot, a disease of significance affecting vegetable
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Polyploid plants, such as hexaploid
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Mungbean is one of the prominent pulse crops in Indonesia since the mungbean seeds are highly nutritious and has become an important part of the diet for the community. The black-seeded mungbean highly nutritious as it contains high anthocyanin content. We have developed a black-seeded mungbean lines that need to be evaluated for drought tolerance. Drought tolerance is important as mungbean is usually cultivated during the drought-prone dry season that leads to total loss. This study aimed to (1) determine the effectiveness of drought tolerance indices to select drought tolerance in black-seeded mungbean, (2) reveal the drought indices most suitable to select drought-tolerant, high- yielding black-seeded mungbean lines. This study was conducted during dry season in the Field Laboratory of Universitas Nusa Cendana. A Split-Plot design was employed, consisting of irrigation frequencies as the main plot and mungbean genotype as the sub- plot treatments. The main plot consisted of three levels, i.e. irrigation every day (I1), every four days (I2), and every seven days (I3), and the subplot consisted of 23 mungbean genotypes. Seed yields under non-stress and stress conditions were used to calculate the drought indices. The data were subjected to ANOVA, PCA and correlation analysis. There were significant variations in seed yields among genotypes under different drought indices. The indices MP, GMP, STI, HARM, MRP, SSI, YSI, MSTIK1, and MSTIK2 are suitable for selection of drought-tolerant, high-yielding mungbean lines. V9.HT, V10.HT, V11.HT, V16.HT, V18.HT, V19.HT, V20.HT, V22.HT were potential for further evaluation as promising drought tolerant, high yielding varieties.
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