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"Protein"

Research Article

Selection for Barley Seed Quality Increase in Kazakhstan Environment
Laura Tokhetova, Aset Toktamysov, Sabir Makhmadjanov, Gulsim Baimbetova, Zhanar Zhumadilova
Plant Breed. Biotech. 2023;11(3):185-196.   Published online September 1, 2023
DOI: https://doi.org/10.9787/PBB.2023.11.3.185

The aim of the research is to investigate collective samples of barley of various ecological-geographical origination, to select donors with a high percentage of protein per grain, and to breed new varieties and hybrids with the use of various selection and genetics methods. The amount of protein per grain was determined by the Kjeldahl method, while levels of starch were indicated by the polarimetry method. The combinational capability of donors was evaluated with the use of top crossing interbreeding. Combinative mutability was evaluated under the external environment influence. An analysis of the current development and employment state of various parental form searches to cultivate high-protein kinds of barley, methods of selection through molecule marker usage, methods of hybridization, and biotechnical manipulation to achieve the desired result was conducted. Most suitable parental forms from collective materials were picked to acquire high protein per grain percentage kinds and hybrids, amongst them are Saule, Asem, Arna, Harmal, and Lignee-527 varieties. These donors are perspective varieties, that should be included in selective programs in Kazakhstan.

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  • Nutritional and Functional Composition of Barley Varieties From Legambo District, Ethiopia
    Yalew Yiblet, Worku Misganaw, Endale Adamu, Cristiano Capurso
    The Scientific World Journal.2024;[Epub]     CrossRef
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Review Article

Genetics of Testcrossed Streak Virus Resistance Carotene Quality Protein Maize
Sunday Ayodele Ige, Bashir Omolaran Bello, Jimoh Mahamood, Michael Afolabi, Aremu Charity, Stephen Abolusoro, Abosede Victoria Adeniyi
Plant Breed. Biotech. 2023;11(3):155-167.   Published online September 1, 2023
DOI: https://doi.org/10.9787/PBB.2023.11.3.155

Development of Provitamin A quality protein maize (PVA-QPM) conferring resistance to maize streak virus (MSV) would reduce the prevalence of the disease, alleviate malnutrition and increase food security in sub-Saharan Africa. This study was conducted to (i) evaluate early maturing PVA-QPM inbreds and their derived testcross hybrids for grain yield, MSV-resistant, carotenoids, and tryptophan contents, (ii) estimate the combining ability of the MSV-resistant PVA-QPM testcrosses for all traits. Five improved open-pollinated MSV resistance cultivars and five early maturing PVA-QPM inbreds were crossed in a half-diallel fashion without reciprocals. The derived forty-five F1 topcrosses, ten parental materials, and two commercial hybrids that served as controls were tested at the Lower Niger River Basin Development Authority in Oke-Oyi, Nigeria, during rain-fed of the year 2019 and 2020. The PVA-QPM inbreds from TZEIORQ 13, TZEIORQ 29, and TZEQI 82 that were crossed with MSV resistance AK-9528-DMRSR and Pop 28 SR appeared potentially useful combinations for enhancing grain yield, MSV-resistant, carotenoids, and tryptophan contents, Testcrossed TZEQI 82 × AK-9528-DMRSR POP 28 SR, TZEQI 82 × ACR. 91 SUWAN-1-SR C1 and TZEQI 82 × IK.91 TZL COMP 3-Y C1 were most outstanding for all measured grain yield and nutrient contents. Additive genetic effects were preponderant over non-additive genetic effects under artificial infection of MSV disease. These three promising MSV resistance PVA-QPM hybrids should be evaluated under on-farm multiplication trials for stability performance and adaptation to reduce malnourishment and food self-sufficiency in SSA. Also, further researches on genomic analyses of the superior testcrosses are desirable.

Citations

Citations to this article as recorded by  
  • Breeding Insights Into Curvularia Leaf Spot Resistance and Agronomic‐Nutritional Resilience in Extra‐Early Provitamin A‐Quality Protein Maize (Zea mays L.) Testcrosses
    Bashir Omolaran Bello
    Plant Breeding.2026;[Epub]     CrossRef
  • Marker-Assisted Selection for Gray Leaf Spot Resistance in Extra-Early Provitamin A Quality Protein Maize Inbred Lines
    Bashir Omolaran Bello, Musa Shuaib, Alafe Hakeem Azeez, Suleiman Aliyu, Adeola Comfort Odutayo, Zainab Adeola Abidoye
    Plant Molecular Biology Reporter.2026;[Epub]     CrossRef
  • Multivariate modeling of nutritional and yield traits in extra‐early provitamin A quality protein maize
    Tajudeen Afimoh Olajide, Omolaran Bashir Bello, Michael Segun Afolabi, Sunday Ayodele Ige
    Agronomy Journal.2026;[Epub]     CrossRef
  • Transcriptional and nutritional responses of extra-early provitamin A quality protein maize under aflatoxin stress
    Omolaran Bashir Bello
    Euphytica.2026;[Epub]     CrossRef
  • Metabolite‐Mediated Nutritional and Agronomic Responses of Extra‐Early Biofortified Maize (Zea mays L.) to Fall Armyworm (Spodoptera frugiperda) Infestation
    O. B. Bello, M. S. Afolabi, S. A. Ige, M. Shuaibu, A. H. Azeez, S. Aliyu, A. C. Odutayo, A. A. Ahmed, Z. A. Abidoye, O. A. Fehintola
    Plant Breeding.2026;[Epub]     CrossRef
  • Breeding for resistance to maize streak virus: challenges, progress and future directions: a review
    Malven Mushayi, Hussein Shimelis, John Derera, Seltene Abady Tesfamariam
    Frontiers in Plant Science.2025;[Epub]     CrossRef
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Research Articles
Allelic Diversity at Protein Disulfide Isomerase Like 1-1 (PDIL1-1) Gene is Associated with Amylose Content in Japonica Rice
Cheryl Adeva, Ju-Won Kang, Kyu-Chan Shim, Ngoc Ha Luong, Hyun-Sook Lee, Jong-Hee Lee, Sang-Nag Ahn
Plant Breed. Biotech. 2023;11(1):56-68.   Published online March 1, 2023
DOI: https://doi.org/10.9787/PBB.2023.11.1.56

Amylose content is a key factor affecting the eating and cooking qualities of rice. In our previous study, protein disulfide isomerase like 1-1 (PDIL1-1) on chromosome 11 was a candidate gene for amylose content (AC) trait. Based on whole genome sequencing, polymorphisms were identified between Dodamssal and Hwayeong on PDIL1-1. In this study, the association of PDIL1-1 on AC was characterized. Haplotype analysis of 79 KNU accessions highlighted the presence of allelic patterns identifiable by the sequence variants between Dodamssal and Hwayeong. Identified SNPs and InDel were used to develop gene-based molecular markers for PDIL1-1. The 29 F2 plants and 160 Korean japonica cultivars were classified into two and three groups, respectively, based on the G/A SNP at position -4973180 and ATTCG/G at position -4974161. Our findings revealed that the G/A SNP at position -4973180 of PDIL1-1 plays a role in regulating the AC in japonica rice. This suggested that PDIL1-1 would be useful for fine-tuning the rice AC. To our knowledge, no studies of the allelic variation of the PDIL1-1 gene regulating AC have been reported worldwide. Furthermore, no research had reported the development of PDIL1-1 gene-based molecular markers.

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Screening and Breeding for Biofortification of Rice with Protein and High Lysine Contents
Ji-Yun Lee, Ju-Won Kang, Su-Min Jo, Young-Ho Kwon, So-Myeong Lee, Sais-Beul Lee, Dong-Jin Shin, Dong-Soo Park, Jong-Hee Lee, Jong-Min Ko, Jun-Hyeon Cho
Plant Breed. Biotech. 2021;9(3):199-212.   Published online September 1, 2021
DOI: https://doi.org/10.9787/PBB.2021.9.3.199

A total of 134 domestic and foreign genetic resources were analyzed for their protein and amino acids contents in order to identify breeding lines with high lysine content to improve nutritional components of rice. The protein contents ranged between 6.7% and 14.8%, with an average of 8.7%. The Dharial mutant-derived lines had relatively high protein content with the highest amino acids content of 130.16 mg/g and the highest lysine content of 3.86 mg/g which is about 5 times higher than that of the parent. In the case of mutant-derived lines with high floury endosperm such as Goami2, Dodamssal, Milyang320 and LA1, the total amino acids content was as low as 72.61-82.0 mg/g; however, lysine content ranged high between 2.64-3.35 mg/g with lysine ratio to the total amino acids was 3.6%-4.1% which is higher than the average lysine content ratio of 3.0%. Furthermore, correlation analysis revealed a very strong positive correlation between the total amino acids and total protein contents. In contrast, lysine content showed no significant correlation neither with total amino acids nor with protein contents. The lysine content of Milyang320, which was grown in 5 regions across Korea was 0.33%, showing an increase of about 22% compared to that recorded in Nampyeong (0.27%). Therefore, these data suggest that lysine content of Milyang320 is controlled genetically and could be serve as a source in high lysine rice breeding program.

Citations

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  • Lysine Matters: Genetic and Biotechnological Innovations to Combat Protein Malnutrition
    Varinder Singh, Manjari Mishra, Sneh Lata Singla‐Pareek, Joy K. Roy, Ashwani Pareek
    Plant, Cell & Environment.2026; 49(3): 1509.     CrossRef
  • Assessing two decades of breeding for biofortified rice with zinc, iron or protein
    Gogineni S.V. Prasad, Chilukuri S. Rao, Kalambur Muralidharan, Ranganathan Sridhar, Ebrahim A. Siddiq
    Journal of Agriculture and Food Research.2025; 24: 102317.     CrossRef
  • Biofortification as a solution for addressing nutrient deficiencies and malnutrition
    Bindu Naik, Vijay Kumar, Sheikh Rizwanuddin, Sadhna Mishra, Vivek Kumar, Per Erik Joakim Saris, Naresh Khanduri, Akhilesh Kumar, Piyush Pandey, Arun Kumar Gupta, Javed Masood Khan, Sarvesh Rustagi
    Heliyon.2024; 10(9): e30595.     CrossRef
  • Analysis of volatile compounds of several rice varieties according to endosperm type using an electronic nose
    Chae-Min Han, Jong-Hee Shin, Sang-Kuk Kim, Jung-Gi Ryu
    Journal of Crop Science and Biotechnology.2023; 26(3): 359.     CrossRef
  • Rice Storage Proteins: Focus on Composition, Distribution, Genetic Improvement and Effects on Rice Quality
    Long Xinkang, Guan Chunmin, Wang Lin, Jia Liting, Fu Xiangjin, Lin Qinlu, Huang Zhengyu, Liu Chun
    Rice Science.2023; 30(3): 207.     CrossRef
  • Comparative Proteome-wide Characterization of Three Different Tissues of High-Protein Mutant and Wild Type Unravels Protein Accumulation Mechanisms in Rice Seeds
    Cheol Woo Min, Ravi Gupta, Ju-Young Jung, Randeep Rakwal, Ju-Won Kang, Jun-Hyeon Cho, Jong-Seong Jeon, Sun Tae Kim
    Journal of Agricultural and Food Chemistry.2023; 71(32): 12357.     CrossRef
  • GWAS to spot candidate genes associated with grain quality traits in diverse rice accessions of North East India
    Rahul K. Verma, S. K. Chetia, Vinay Sharma, Samindra Baishya, Himanshu Sharma, M. K. Modi
    Molecular Biology Reports.2022; 49(6): 5365.     CrossRef
  • Comparison of physicochemical properties of pollen substitute diet for honey bee (Apis mellifera)
    Hyun Jee Kim, Jinseok Hwang, Zakir Ullah, Bilal Mustafa, Hyung Wook Kwon
    Journal of Asia-Pacific Entomology.2022; 25(4): 101967.     CrossRef
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Overexpression of S-Adenosylmethionine Synthetase Gene from Pyropia tenera Enhances Tolerance to Abiotic Stress
Hyun-Ju Hwang, Jin-Woo Han, Hyun Dae Hong, Jong Won Han
Plant Breed. Biotech. 2017;5(4):304-313.   Published online December 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.4.304

Pyropia tenera is an intertidal red alga of commercial significance owing to its popularity as a health-promoting seafood product. This alga grows in marine environments and is frequently exposed to high salinity and osmotic stress, which impact its growth. Therefore, the enhancement of stress tolerance in P. tenera is critical. In the present work, we aimed to elucidate the mechanisms underlying abiotic stress tolerance in this species; specifically, we identified the P. tenera S-adenosylmethionine synthetase-encoding gene (PtSAMS) and characterized its biological function. This gene, which is known to play a role in stress tolerance in other plants, was cloned and overexpressed in Escherichia coli under high-salinity conditions. The PtSAMS gene was found to encode a 385-amino-acid protein with a molecular weight of 41.8 kDa. In silico sequence alignment and phylogenetic analysis of the PtSAMS amino acid sequence showed that the encoded protein comprises three conserved domains and two motifs that are highly conserved in other plants. Growth assay results indicated that PtSAMS-overexpressing E. coli cells exhibit enhanced tolerance to salt stress. The results suggest that PtSAMS expression is induced by a combination of ion toxicity and osmotic stress resulting from exposure to high salinity in marine environments, and that this gene is expressed at housekeeping levels owing to growth in such conditions. The findings suggest that PtSAMS could be used as a potentially valuable bioresource with utility in the genetic engineering of salt stress-tolerant crop plants.

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  • Gibberellin mediates spermidine-induced salt tolerance and the expression of GT-3b in cucumber
    Yu Wang, Xiaowen Gong, Weikang Liu, Lei Kong, Xinyu Si, Shirong Guo, Jin Sun
    Plant Physiology and Biochemistry.2020; 152: 147.     CrossRef
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Environmental Stability and Correlation of Soybean Seed Starch with Protein and Oil Contents
Sanjeev K. Dhungana, Krishnanand P. Kulkarni, Minsu Kim, Bo-Keun Ha, Sungtaeg Kang, Jong Tae Song, Dong-Hyun Shin, Jeong-Dong Lee
Plant Breed. Biotech. 2017;5(4):293-303.   Published online December 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.4.293

Seed starch content (SSC) is a decisive factor influencing soy food quality. Variation in SSC affects the composition of major components, oil, and protein in soybean seeds. Therefore, understanding G × E interaction of SSC is important to produce soybeans with stable SSC. In the present study, G × E interactions of 17 soybean genotypes having different SSC (0.24–1.48%) and correlation of SSC with crude protein (CP) and crude fat (CF) were investigated. The genotypes were evaluated for SSC and other traits at two planting dates across three locations over two years (2015 and 2016). The genotype × year, genotype × location, and genotype × year × location interactions were found to be significant (P ≤ 0.001) for SSC, CP, and CF. The average SSC content was found to be higher in 2015 than in 2016. Late planted soybeans contained higher SSC than the early planting soybeans. The SSC was negatively affected by the average daily mean and minimum temperatures and cloudiness during the pod-filling stage. Based on the mean rank, IT189276 (1.39%) was observed to be the most stable genotype among the high starch containing soybeans. Significant (P ≤ 0.0001) negative correlations were found between SSC and CP as well as CP and CF contents. However, a significant (P ≤ 0.05) positive correlation was observed between SSC and CF content. Results of this study showed that SSC affects the seed protein and oil contents and is significantly influenced by the growing environments.

Citations

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  • Soybean as an animal protein analogue: Hormetic effect, popularity and consumer preference
    V Jayasri, Ayyagari Ramlal, Sreeramanan Subramaniam, Aparna Nautiyal, Praveen Gupta, Dhandapani Raju, S K Lal, Ambika Rajendran, Ankita Rajendra Parab
    Food Chemistry Advances.2026; 11: 101272.     CrossRef
  • Effects of Allelic Variation in Storage Protein Genes on Seed Composition and Agronomic Traits of Soybean in the Omsk Oblast of Western Siberia
    Ilya V. Strembovskiy, Pavel Yu. Kroupin, Lyudmila V. Omel’yanuk, Andrey V. Arkhipov, Yana S. Meglitskaya, Mikhail S. Bazhenov, Akimbek M. Asanov, Mariya E. Mukhordova, Oksana A. Yusova, Yuliya I. Yaschenko, Gennady I. Karlov, Mikhail G. Divashuk
    Agronomy.2025; 15(11): 2533.     CrossRef
  • Comparative Evaluation of Nutritional Quality and In Vitro Protein Digestibility in Selected Vegetable Soybean Genotypes at R6 and R8 Maturity
    Kanneboina Soujanya, T. Supraja, Aparna Kuna, Ramakrishnan M. Nair, S. Triveni, Kalenahalli Yogendra
    Foods.2025; 14(14): 2549.     CrossRef
  • Traditional Legume Seed Fermentation Processes: What is the Individual Impact of the Cooking and Fermentation Stages on the Degradation of Anti-Nutritional Factors?
    Charlène Gbedo, Elodie Arnaud, Caroline Strub
    Food Reviews International.2025; 41(5): 1290.     CrossRef
  • The effect of ethyl methanesulfonate (EMS) and environmental factors on soybean traits
    Khaled Ramadan, Souhail Nader, Loubna Mokrani, Ghrood Al Aswd, Samir Abou-Isba, Abdulkarim Dakah
    BMC Plant Biology.2025;[Epub]     CrossRef
  • Unveiling Diversity for Quality Traits in the Indian Landraces of Horsegram [Macrotyloma uniflorum (Lam.) Verdc.]
    Manju Kumari, Siddhant Ranjan Padhi, Sushil Kumar Chourey, Vishal Kondal, Swapnil S. Thakare, Ankita Negi, Veena Gupta, Mamta Arya, Jeshima Khan Yasin, Rakesh Singh, Chellapilla Bharadwaj, Atul Kumar, Kailash Chandra Bhatt, Rakesh Bhardwaj, Jai Chand Rana
    Plants.2023; 12(22): 3803.     CrossRef
  • Genetic variation in four maturity genes and photoperiod insensitivity effects on the yield components and on the growth duration periods of soybean
    I. M. Raievska, A. S. Schogolev
    Regulatory Mechanisms in Biosystems.2023; 14(1): 55.     CrossRef
  • Soybean genetic resources contributing to sustainable protein production
    Bingfu Guo, Liping Sun, Siqi Jiang, Honglei Ren, Rujian Sun, Zhongyan Wei, Huilong Hong, Xiaoyan Luan, Jun Wang, Xiaobo Wang, Donghe Xu, Wenbin Li, Changhong Guo, Li-Juan Qiu
    Theoretical and Applied Genetics.2022; 135(11): 4095.     CrossRef
  • Correlations between soybean seed quality traits using a genome-wide association study panel grown in Canadian and Ukrainian mega-environments
    Huilin Hong, Mohsen Yoosefzadeh-Najafabadi, Istvan Rajcan
    Canadian Journal of Plant Science.2022; 102(5): 1040.     CrossRef
  • Control of seed born mycobiota associated with Glycine max L. Merr. seeds by a combination of traditional medicinal plants extracts
    SULAIMAN A. AL YOUSEF
    BIOCELL.2021; 45(5): 1403.     CrossRef
  • Application of near infrared spectroscopy for determination of relationship between crop year, maturity group, location, and carbohydrate composition in soybeans
    Mukti Singh, Michael J. Bowman, Mark A. Berhow, Neil P. J. Price, Sean X. Liu
    Crop Science.2021; 61(4): 2409.     CrossRef
  • Comparison of sugars, lipids and phenolics content in the grains of organically and conventionally grown soybean in Serbia
    Jelena M. Golijan, Danijel D. Milinčić, Radivoj B. Petronijević, Mirjana B. Pešić, Sladjana P. Stanojević, Miroljub B. Barać, Slavoljub Lekić, Aleksandar Ž. Kostić
    Zemdirbyste-Agriculture.2021; 108(1): 51.     CrossRef
  • Protein, Amino Acid, Oil, Fatty Acid, Sugar, Anthocyanin, Isoflavone, Lutein, and Antioxidant Variations in Colored Seed-Coated Soybeans
    Sanjeev Kumar Dhungana, Jeong-Hyun Seo, Beom-Kyu Kang, Ji-Hee Park, Jun-Hoi Kim, Jung-Sook Sung, In-Youl Baek, Sang-Ouk Shin, Chan-Sik Jung
    Plants.2021; 10(9): 1765.     CrossRef
  • Morpho-chemical evaluation of soybean genotypes across tropical agroecosystem
    A Krisnawati, M M Adie
    IOP Conference Series: Earth and Environmental Science.2019; 230: 012106.     CrossRef
  • Assessment of Phenotypic Variations and Correlation among Seed Composition Traits in Mutagenized Soybean Populations
    Zhou Zhou, Naoufal Lakhssassi, Mallory A. Cullen, Abdelhalim El Baz, Tri D. Vuong, Henry T. Nguyen, Khalid Meksem
    Genes.2019; 10(12): 975.     CrossRef
  • Genome-wide association study of seed protein, oil and amino acid contents in soybean from maturity groups I to IV
    Sungwoo Lee, Kyujung Van, Mikyung Sung, Randall Nelson, Jonathan LaMantia, Leah K. McHale, M. A. Rouf Mian
    Theoretical and Applied Genetics.2019; 132(6): 1639.     CrossRef
  • Insight Into the Prospects for the Improvement of Seed Starch in Legume—A Review
    Rupesh Tayade, Krishnanand P. Kulkarni, Hyun Jo, Jong Tae Song, Jeong-Dong Lee
    Frontiers in Plant Science.2019;[Epub]     CrossRef
  • Dynamic Transcriptome Changes Related to Oil Accumulation in Developing Soybean Seeds
    Songnan Yang, Long Miao, Jianbo He, Kai Zhang, Yan Li, Junyi Gai
    International Journal of Molecular Sciences.2019; 20(9): 2202.     CrossRef
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Transformation of Somatic Embryos of Prunus incisa ‘February Pink’ with a Visible Reporter Gene
Eun Ju Cheong, Margaret R. Pooler
Plant Breed. Biotech. 2015;3(3):238-243.   Published online September 30, 2015
DOI: https://doi.org/10.9787/PBB.2015.3.3.238

An Agrobacterium-mediated transformation system was developed for the ornamental cherry species Prunus incisa. This system uses both an antibiotic resistance gene (NPTII) and a visible selectable marker, the green fluorescent protein (GFP), to select plants. Cells from leaf and root explants were transformed with a NPTII/GFP fusion gene, and selected visually using fluorescence microscopy. Transformed cells were then induced to undergo embryogenesis and reselected by growing on media containing kanamycin. The presence of the GFP/NPTII fusion gene in all parts of transgenic plants grown in the greenhouse for one year was confirmed by PCR and Southern blot analysis. This transformation and selection system will be useful in future work to introduce genes for pathogen resistance and ornamental traits into flowering cherry germplasm.

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Overexpression of Oshsp16.9 Gene Encoding Small Heat Shock Protein Enhances Tolerance to Abiotic Stresses in Rice
Yu Jin Jung, Ill Sup Nou, Kwon Kyoo Kang
Plant Breed. Biotech. 2014;2(4):370-379.   Published online December 31, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.4.370

Plants have adapted the ability to respond to various abiotic stresses such as high salinity, osmotic stress, high and low temperatures, and drought in order to survive. Small heat shock proteins (sHsps) play important and extensive roles in plant defenses against abiotic stresses. Herein, we cloned an sHsp gene from the rice, which we named Oshsp16.9 based on the molecular weight of the protein. Real-time PCR analysis showed that expression of the Oshsp16.9 gene was rapidly and strongly induced by stresses including high-salinity (250 mM NaCl), osmotic stress (300 mM mannitol), 100 μM ABA, cold (4°C) and heat (45°C). Subcellular localization assay indicated that Oshsp16.9 was localized specifically in the cytoplasm. In addition, overexpression of Oshsp16.9 in rice conferred tolerance of transgenic plants to salt and drought stress. Taken together, these results suggest that the Oshsp16.9 gene is an important determinant of stress response in plants.

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  • Phylogenetic and expression analysis of HSP20 gene family in Rhododendron species of different altitudes
    Xiao-Mian Zhang, Yu-Qing Cao, Meng-Xuan Liu, Bing Liu, Hong Zhou, Yi-Ping Xia, Xiu-Yun Wang
    International Journal of Biological Macromolecules.2025; 309: 143125.     CrossRef
  • Genome-Wide Analysis of Heat Shock Protein Family and Identification of Their Functions in Rice Quality and Yield
    Hong Wang, Sidra Charagh, Nannan Dong, Feifei Lu, Yixin Wang, Ruijie Cao, Liuyang Ma, Shiwen Wang, Guiai Jiao, Lihong Xie, Gaoneng Shao, Zhonghua Sheng, Shikai Hu, Fengli Zhao, Shaoqing Tang, Long Chen, Peisong Hu, Xiangjin Wei
    International Journal of Molecular Sciences.2024; 25(22): 11931.     CrossRef
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    Changyi Wang, Fangfang Ran, Yuwei Zang, Liangwang Liu, Dayong Wang, Yi Min
    The Plant Genome.2023;[Epub]     CrossRef
  • Physiological and Proteomic Analysis of Seed Germination under Salt Stress in Mulberry
    Yi Wang, Wei Jiang, Junsen Cheng, Wei Guo, Yongquan Li, Chenlei Li
    Frontiers in Bioscience-Landmark.2023;[Epub]     CrossRef
  • QTL Mapping and a Transcriptome Integrative Analysis Uncover the Candidate Genes That Control the Cold Tolerance of Maize Introgression Lines at the Seedling Stage
    Ru-yu He, Tao Yang, Jun-jun Zheng, Ze-yang Pan, Yu Chen, Yang Zhou, Xiao-feng Li, Ying-zheng Li, Muhammad-Zafar Iqbal, Chun-yan Yang, Jian-mei He, Ting-zhao Rong, Qi-lin Tang
    International Journal of Molecular Sciences.2023; 24(3): 2629.     CrossRef
  • Identification of simple sequence repeat markers linked to heat tolerance in rice using bulked segregant analysis in F2 population of NERICA-L 44 × Uma
    K. Stephen, K. Aparna, R. Beena, R. P. Sah, Uday Chand Jha, Sasmita Behera
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Biology of plants coping stresses: epigenetic modifications and genetic engineering
    Samriti Sharma, Arjun Chauhan, Sneha Dobbal, Raj Kumar
    South African Journal of Botany.2022; 144: 270.     CrossRef
  • Comparative Proteomics Reveals the Difference in Root Cold Resistance between Vitis. riparia × V. labrusca and Cabernet Sauvignon in Response to Freezing Temperature
    Sijin Chen, Hongyan Su, Hua Xing, Juan Mao, Ping Sun, Mengfei Li
    Plants.2022; 11(7): 971.     CrossRef
  • Genomic Survey of Heat Shock Proteins in Liriodendron chinense Provides Insight into Evolution, Characterization, and Functional Diversities
    Yongchao Ke, Mingyue Xu, Delight Hwarari, Jinhui Chen, Liming Yang
    International Journal of Molecular Sciences.2022; 23(23): 15051.     CrossRef
  • WHIRLY1 Regulates HSP21.5A Expression to Promote Thermotolerance in Tomato
    Kunyang Zhuang, Yangyang Gao, Zhuangbin Liu, Pengfei Diao, Na Sui, Qingwei Meng, Chen Meng, Fanying Kong
    Plant and Cell Physiology.2020; 61(1): 169.     CrossRef
  • Production of miraculin protein in suspension cell lines of transgenic rice usingAgrobacterium
    Hee Kyoung Kim, Ji Yun Go, So-Young Park, Kwon Kyoo Kang, Yu Jin Jung
    Journal of Plant Biotechnology.2020; 47(3): 227.     CrossRef
  • Silencing of class I small heat shock proteins affects seed-related attributes and thermotolerance in rice seedlings
    Neelam K. Sarkar, Sachin Kotak, Manu Agarwal, Yeon-Ki Kim, Anil Grover
    Planta.2020;[Epub]     CrossRef
  • Stable expression of brazzein protein, a new type of alternative sweetener in transgenic rice
    Ye Rim Lee, Shahina Akter, In Hye Lee, Yeo Jin Jung, So Young Park, Yong-Gu Cho, Kwon Kyoo Kang, Yu Jin Jung
    Journal of Plant Biotechnology.2018; 45(1): 63.     CrossRef
  • Stable expression and characterization of brazzein, thaumatin and miraculin genes related to sweet protein in transgenic lettuce
    Yeo Jin Jung, Kwon Kyoo Kang
    Journal of Plant Biotechnology.2018; 45(3): 257.     CrossRef
  • Genome-wide identification and analysis of biotic and abiotic stress regulation of small heat shock protein (HSP20) family genes in bread wheat
    Senthilkumar K. Muthusamy, Monika Dalal, Viswanathan Chinnusamy, Kailash C. Bansal
    Journal of Plant Physiology.2017; 211: 100.     CrossRef
  • Effect of drought stress on chlorophyll fluorescence, antioxidant enzyme activities and gene expression patterns in faba bean (Vicia faba L.)
    Ghassen Abid, Mahmoud M’hamdi, Dominique Mingeot, Marwa Aouida, Ibtissem Aroua, Yordan Muhovski, Khaled Sassi, Fatma Souissi, Khediri Mannai, Moez Jebara
    Archives of Agronomy and Soil Science.2017; 63(4): 536.     CrossRef
  • A novel method for high-frequency genome editing in rice, using the CRISPR/Cas9 system
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Differential Expression of β-1,3-Glucanase Transcripts Induced by Pathogens in the Leaves of Vitis flexuosa
Soon Young Ahn, Seon Ae Kim, Hae Keun Yun
Plant Breed. Biotech. 2014;2(2):176-183.   Published online June 30, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.2.176

The differential expression of β-1,3-glucanase genes in the leaves of Vitis flexuosa induced by fungal and bacterial pathogen infections was investigated. The nucleotide and deduced amino acid sequences of β-1,3-glucanase genes from the transcripts of V. flexuosa were compared. The percentage similarity of deduced amino acid ranged from 22.0% between VfGlu34359 and VfGlu48103 to 96.9% in VvGlu2735 and VvGlu48103. To demonstrate the differential expression pattern of β-1,3-glucanase genes, primers specific to unique regions in each gene were obtained by alignment of the sequences. Accumulation patterns of β-1,3-glucanase mRNAs in the leaves of V. flexuosa were induced differentially and were dependent on the pathogens used including Botrytis cinerea, Colletotrichum acutatum, Elsinoe ampelina, and Rhizobium vitis. This study provides useful information that will improve our understanding of grapevine defense responses to various pathogen attacks.

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    Ling Wang, Ruilong Li, Kaiwei Li, Ziyang Qu, Ruijin Zhou, Guilong Lu, Peng Li, Guirong Li
    BMC Plant Biology.2024;[Epub]     CrossRef
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    O. Phonyiam, H. Tomiyama, P. Opio, T. Saito, K. Ohkawa, H. Ohkawa, S. Kondo
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  • Current status and future prospects of grapevine anthracnose caused by Elsinoe ampelina: An important disease in humid grape‐growing regions
    Zhi Li, Ricardo Feliciano dos Santos, Linlin Gao, Pingping Chang, Xiping Wang
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Evaluation of Genetic Diversity and Comparison of Biochemical Traits of Soybean (Glycine max L.) Germplasm Collections
Jae Young Song, Xiang-min Piao, Yu-Mi Choi, Gi-An Lee, Jong-Wook Chung, Jung-Ro Lee, Yeonju Jung, Hong-Jae Park, Myung Chul Lee
Plant Breed. Biotech. 2013;1(4):374-384.   Published online December 31, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.4.374

Assessment of the genetic variation and biochemical traits among various germplasm collections are necessary for utilization of valuable genetic resource and effective strategies of germplasm conservation. The aims of this study were to analyze the genetic diversity using SSR markers and compare protein, oil content and fatty acid composition of about 185 soybean germplasm which is comprised of Korean landraces and collections from six different global regions. Seventy two SSR markers were selected based on their distribution on the 17 genetic linkage groups of soybean. A total of 784 alleles were detected from all accessions, with an average of 10.9 alleles per microsatellite locus. The genetic diversity observed was high wherein three distinct groups were formed containing several subgroups according to their geographic origins. Biochemical contents assay revealed significant differences in their protein and oil contents. Generally, the crude protein content was highest among India and Myanmar collections, while oil content was highest among accessions from USA and China. A negative correlation was observed between protein and oil contents, and between oleic and linolenic acids. The highest value observed for biochemical content among all germplam tested was 45.8% for crude protein, 26.7% for crude oil and 35.7% for oleic acid composition. Our study provided a better understanding of genetic relationships and geographical origin among various germplasm collections, and it could contribute to more efficient utilization of valuable genetic resources.

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    Jaehwan Kim, Yeong Yeop Jeong, Hyunwoo Park, Pil Joon Seo, Kyung Do Kim
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  • Genetic diversity in early maturity Chinese and European elite soybeans: A comparative analysis
    Xindong Yao, Jiang-yuan Xu, Zhang-xiong Liu, Martin Pachner, Eva Maria Molin, Leopold Rittler, Volker Hahn, Willmar Leiser, Yong-zhe Gu, Yu-qing Lu, Li-juan Qiu, Johann Vollmann
    Euphytica.2023;[Epub]     CrossRef
  • Natural Variation of Seed Tocopherol Composition in Diverse World Soybean Accessions from Maturity Group 0 to VI Grown in China
    Suprio Ghosh, Shengrui Zhang, Muhammad Azam, Berhane S. Gebregziabher, Ahmed M. Abdelghany, Abdulwahab S. Shaibu, Jie Qi, Yue Feng, Kwadwo Gyapong Agyenim-Boateng, Yitian Liu, Huoyi Feng, Yecheng Li, Jing Li, Bin Li, Junming Sun
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    Muhammad Azam, Shengrui Zhang, Jie Qi, Ahmed M. Abdelghany, Abdulwahab S. Shaibu, Suprio Ghosh, Yue Feng, Yuanyuan Huai, Berhane S. Gebregziabher, Jing Li, Bin Li, Junming Sun
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  • Genetic Diversity Patterns and Discrimination of 172 Korean Soybean (Glycine max (L.) Merrill) Varieties Based on SSR Analysis
    Tae-Young Hwang, Byeong Sam Gwak, Jwakyung Sung, Hong-Sig Kim
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    Leomar Guilherme Woyann, Daniela Meira, Andrei Daniel Zdziarski, Gilvani Matei, Anderson Simionato Milioli, Ana Claudia Rosa, Laura Alexandra Madella, Giovani Benin
    Industrial Crops and Products.2019; 140: 111721.     CrossRef
  • Natural Variation in Fatty Acid Composition of Diverse World Soybean Germplasms Grown in China
    Ahmed M. Abdelghany, Shengrui Zhang, Muhammad Azam, Abdulwahab S. Shaibu, Yue Feng, Jie Qi, Yanfei Li, Yu Tian, Huilong Hong, Bin Li, Junming Sun
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    KOREAN JOURNAL OF CROP SCIENCE.2014; 59(4): 492.     CrossRef
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Identification of QTL for Grain Protein Content and Grain Hardness from Winter Wheat for Genetic Improvement of Spring Wheat
Hwayoung Heo, Jamie Sherman
Plant Breed. Biotech. 2013;1(4):347-353.   Published online December 31, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.4.347

To utilize the favorable gene(s) from winter wheat for genetic improvement of spring wheat, this study was carried out to identify the quantitative trait loci (QTL) associated with grain protein content (GPC) and grain hardness (GH) by analysis of recombinant inbred lines (RILS) derived from a cross between spring wheat and spring version of winter wheat. A genetic map of 334 loci was constructed which covered 1575.30cM on all 21 chromosomes. Two QTLs on 3B and 5B chromosome were detected for GPC. A QTL identified barc77 on chromosome 3B had additive effect of 0.17 and the other QTL identified by gwm499 on chromosome 5B had additive effect of 0.19. There were two major QTLs for GH identified on Chromosome 1B and chromosome 5A. The QTL on 1B was localized within a 18.7cM region flanked by wmc719 and wmc367-1 with 1.75 additive effect. The QTL on chromosome 5A flanked by SNP markers, IWA6573 and IWA2363, had additive effect of 1.44.

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  • Quantitative Trait Loci for Grain Protein Content in Wheat (Triticum aestivum L.)
    Min-Ju Kim, Myoung-Goo Choi, Go-Eun Lee, Chon-Sik Kang, Chang-Hyun Choi, Jun-Seok Choi, Myoung-Hui Lee, Jae-Han Son
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  • Construction of a novel Wheat 55 K SNP array-derived genetic map and its utilization in QTL mapping for grain yield and quality related traits
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    S Podgorny, O Skripka, A Samofalov, S Gromova, V Chernova
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    Karansher S. Sandhu, Paul D. Mihalyov, Megan J. Lewien, Michael O. Pumphrey, Arron H. Carter
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    Ajay Kumar, Eder E. Mantovani, Senay Simsek, Shalu Jain, Elias M. Elias, Mohamed Mergoum, Aimin Zhang
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  • Genome-Wide Association Mapping of Yield and Grain Quality Traits in Winter Wheat Genotypes
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    PLOS ONE.2015; 10(10): e0141339.     CrossRef
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Characterization of Thaumatin-like Gene Family and Identification of Pectobacterium carotovorum subsp. carotovorum Inducible Genes in Brassica oleracea
Nasar Uddin Ahmed, Jong-In Park, Hee-Jeong Jung, Mi-Young Chung, Yong-Gu Cho, Ill-Sup Nou
Plant Breed. Biotech. 2013;1(2):111-121.   Published online June 30, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.2.111

Cabbage (Brassica oleracea) is a very important vegetable worldwide and biotic stress is a crucial issue for this crop. Enhancement of resistance by exploiting stress resistance-related genes offers the most efficient approach to address this issue. Among the stress resistance-related genes, thaumatin-like proteins (TLPs) play a vital role in enhancement of resistance against stresses. In this study, we identified 12 TLPs from B. oleracea genomic DNA sequencing database, analyzed their sequences and compared with other published pathogenesis-related TLPs, and found a high degree of homology with them. In addition, these genes showed an organ-specific expression, three of which expressed differentially after Pectobacterium carotovorum subsp. carotovorum infection in cabbage plants. Data obtained in this study suggest the probable involvement of TLPs in resistance against soft rot disease of Brassica.

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    Molecular Genetics and Genomics.2019; 294(5): 1137.     CrossRef
  • Alfin-like transcription factor family: characterization and expression profiling against stresses in Brassica oleracea
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    BMC Plant Biology.2014;[Epub]     CrossRef
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