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Research Articles

The Effect of Benzyl Aminopurine (BAP) Concentration on Patchouli (Pogostemon cablin Benth.) Multiplication and the Role of Covering in Successful Acclimatization
Didik Pudji Restanto, Mohammad Candra Prayoga, Farizha Amalia Radiansyah, Sigit Soeparjono, Ummi Sholikhah, Popy Hartatie Hardjo
Plant Breed. Biotech. 2026;14:126-138.
Published online May 11, 2026
DOI: https://doi.org/10.9787/PBB.2026.14.126

Patchouli is a plant that produces essential oil. One problem with patchouli is that production remains low due to virus attacks. To address this issue, virus-free seedlings can be produced through tissue culture. This measure requires examining the effectiveness of patchouli regeneration in vitro through histological observations and acclimatization, in as much as effective propagation supports healthy seedlings. The purpose of this study was to determine the optimal propagation for Aceh patchouli via in vitro propagation, through histological observation. It investigated the optimal acclimatization for patchouli to assist patchouli adaptation. The study was carried out in several stages, starting from shoot multiplication, root induction, and acclimatization. Shoot multiplication was carried out on MS medium supplemented with BAP : 0.25 mg/L, 0.50 mg/L, 0.75 mg/L, 1.00 mg/L, 1.25 mg/L, and 1.50 mg/L. Root induction was carried out on MS medium supplemented with NAA : 0 mg/L, 0.2 mg/L, 0.4 mg/L, 0.6 mg/L, and 0.8 mg/L. Finally, the acclimatization was performed on compost under covering treatment. The results demonstrated that the best shoot multiplication, taking place in 6.3 days, was obtained through the 0.25 mg/L BAP treatment. This treatment resulted in the highest shoot proliferation, with a mean of 68.5 shoots per explant, as well as the greatest shoot height (5.1 cm). The best root induction was obtained from NAA 0.2 mg/L, producing a plant length (18.27 cm), plant height (9.60 cm), root length (8.67 cm), and plant fresh weight (1.49 g). During the acclimatization stage, the 12-day covering treatment produced the best seedlings, as evinced by plant length (25.8 cm), shoot height (19.5 cm), root length (7.9 cm), fresh weight (1.85 g), leaf width (3.0 cm), and a survival rate of 100%.

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Pumpkin (Cucurbita moschata) has been increasingly used as bloomless rootstock for cucumber (Cucumis sativus), but it is sensitive to low-temperature, which is the major bottleneck for winter cultivation. Hence, to develop low-temperature tolerant rootstock varieties, it is needed to identify tolerant germplasm from a wide range of genetic resources. For this, we developed a selection criterion for a quick assessment of low-temperature tolerance in pumpkin germplasms from different geographical origins. We considered various indexes for the fast evaluation of low-temperature tolerance, including seedling developmental stage, type of seedling (excised or non-excised), growth space, etc. Under the testing condition (17℃/7℃, 8 hours light/16 hours dark, 150 μmol m-2s-1 light intensity), we found a correlation (r=0.71*) in root growth between 3 weeks-cultured excised seedlings and 6 weeks-cultured non-excised seedlings. Therefore, we extrapolate that excised cotyledonary stage seedling treated for 3 weeks is sufficient to differentiate the tolerant germplasms. Using this screening method, we identified the “S81015” could prevail low-temperature stress. Further, we tested grafting compatibility and growth of grafted cucumbers under the low-temperature condition to assess the effect of rootstock and identify low-temperature tolerant and grafting-compatible rootstock germplasm. Upon grafting, we found a high correlation (r=0.97**) between the root fresh weight of 6 weeks-cultured non-excised seedlings and the shoot fresh weight of the grafted cucumbers. In summary, we could identify the low-temperature tolerant pumpkin germplasms by screening at the early developmental stage. Further, as a rootstock, the tolerant pumpkins also fortified the low-temperature tolerance of grafted cucumbers.

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  • Identification of a Novel Candidate Gene for Chilling Tolerance in Pumpkin (Cucurbita moschata) Using Whole-Genome Resequencing
    Hemasundar Alavilli, Jeong-Jin Lee, Chae-Rin You, Sang-Choon Lee, Kihwan Song
    Journal of Plant Biology.2023; 66(4): 317.     CrossRef
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Effects of Irrigation Conditions on Development of Mungbean (Vigna radiata L.) Sprouts
Byeong Cheol Kim, Insu Lim, Se Young Jeon, Minseo Kang, Jungmin Ha
Plant Breed. Biotech. 2021;9(4):310-317.   Published online December 1, 2021
DOI: https://doi.org/10.9787/PBB.2021.9.4.310

Mungbeans (Vigna radiata L.) are one of major legume crops in Asia as major sources of proteins and carbohydrates. Additionally, they provide functional substances such as vitamin and antioxidant compounds when consumed as bean sprouts. In this study, physical traits of mungbean sprouts, such as sprouts yield, thickness and length of hypocotyl, length of epicotyl, number of lateral roots, and length of root depending on four irrigation conditions (irrigation interval: 2 and 4 hours; irrigation time: 2 and 4 minutes) were measured for three cultivars (Dahyeon, Samgang, Sunhwa). In general, the length and thickness of hypocotyl increased gradually until day 3, followed by a decrease on day 4. Lateral roots and the length of root increased during the cultivation period. Sprouts yield was higher under short irrigation time than long irrigation time until day 3. Preferable traits including sprouts yield, the length of hypocotyl, and the thickness of hypocotyl were better under shorter irrigation time conditions (2 minutes). Traits of negative effect for consumers’ preference, such as number of lateral roots and length of epicotyl, were lower under longer irrigation interval conditions (4 hours). Samgang had the highest yield of sprouts. However, it also had the highest growth of epicotyl. Although Sunhwa had preferable physical traits of bean sprouts, it had the least yield of sprouts. Overall, Dahyeon cultivated under 4 hours (irrigation interval) & 2 minutes (irrigation time) condition had the most preferable traits for producing mungbean sprouts. This study provides information about irrigation conditions affecting quality-related traits to produce mungbean sprouts.

Citations

Citations to this article as recorded by  
  • Overview of biochemical changes in red bean sprouts (Vigna angularis) during sprouting
    Le Pham Tan Quoc, Pham My Hao, Pham Thi Quyen
    Environmental and Experimental Biology.2026; 24(2): 155.     CrossRef
  • Impact of Iron (II) Chloride Treatment on the Physical and Metabolic Changes in Mungbean Sprouts
    Aerin Park, Byeong Cheol Kim, Sung Don Lim, Sung Hoon Park, Jungmin Ha
    Food Science & Nutrition.2026;[Epub]     CrossRef
  • Identification of genetic factors influencing flavonoid biosynthesis through pooled transcriptome analysis in mungbean sprouts
    Yeonghun Cho, Hakyung Kwon, Byeong Cheol Kim, Donghwan Shim, Jungmin Ha
    Frontiers in Plant Science.2025;[Epub]     CrossRef
  • Anti-Inflammatory Effects of Mung Bean (Vigna radiata) Extracts from Different Cultivars
    Yeong Jae An, Hye Young Seo, Min Young Kim, Ji Eun Ra, Seung-Yeob Song
    Korean Journal of Breeding Science.2025; 57(4): 345.     CrossRef
  • Amino acids and BCAA composition of Mungbean (Vigna radiata L.) seeds and sprouts for plant-based protein applications
    Chanwook Kim, Seyoung Jeon, Yeon-Ji Jo, Jungmin Ha
    Scientific Reports.2025;[Epub]     CrossRef
  • Effects of Phytohormones on Morphological and Biochemical Traits in Mungbean Sprouts
    Hakyung Kwon, Byeong Cheol Kim, Minseo Kang, Sung Don Lim, Jungmin Ha, Miguel Rebollo-Hernanz
    Journal of Food Quality.2025;[Epub]     CrossRef
  • Metabolic Discrimination of Mungbean (Vigna radiata L.) Sprout Depending on Growth Time from Multivariate Analysis of FT-IR Spectroscopy Data
    Song Yie Park, Yeong Jae Ah, Eun Ji Suh, Eun Bin Choi, Mi Ja Lee, Han Gyeol Lee, Woo Duck Seo, Yu-Na Kim, Seung-Yeob Song
    Korean Journal of Breeding Science.2024; 56(3): 269.     CrossRef
  • Application of Deep Learning Technology for Phenotyping Tissue Specific Length of Sprout Vegetables Using YOLOv8
    Yeonghun Cho, Jae Yoon Kim, Jungmin Ha
    Korean Journal of Breeding Science.2024; 56(4): 416.     CrossRef
  • Metabolic profiling and expression analysis of key genetic factors in the biosynthetic pathways of antioxidant metabolites in mungbean sprouts
    Byeong Cheol Kim, Insu Lim, Jungmin Ha
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Tissue-Specific Metabolic Profiling of Mungbean (Vigna radiata L.) Genotypes with Different Seed Coat Colors
    Seyoung Jeon, Byeong Cheol Kim, Jungmin Ha, Walid Elfalleh
    Journal of Food Quality.2023; 2023: 1.     CrossRef
  • Measurement of Physical Trait and Antioxidant Capacity of Tissues of Mungbean (Vigna radiata L.) Sprouts
    Byeong Cheol Kim, Jungmin Ha
    Korean Journal of Breeding Science.2022; 54(2): 75.     CrossRef
  • Metabolomic and transcriptomic changes in mungbean (Vigna radiata (L.) R. Wilczek) sprouts under salinity stress
    Insu Lim, Minseo Kang, Byeong Cheol Kim, Jungmin Ha
    Frontiers in Plant Science.2022;[Epub]     CrossRef
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In-vitro Regeneration of Interspecific Hybrids in Eggplant Species via Seed and Embryo Culture
Nusrat Tsemah Afful, Daniel Nyadanu, Richard Akromah, Harry Mensah Amoatey, Fuseini Mohammed, Clement Annor
Plant Breed. Biotech. 2020;8(3):226-237.   Published online September 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.3.226

Interspecific hybrids of eggplants (Salanum species) are of prime concern to breeders, as they allow introgression of useful genes from wild species to cultivated ones. However, successful hybridization between species is usually very low. This hampers development of improved hybrids. In-vitro culture techniques may be used to overcome interspecific barriers. Seeds and excised embryos obtained from two crosses (Solanum (S.) melongena × S. torvum and S. melongena × S. anguivi) were inoculated on Murashige and Skoog (MS) basal medium supplemented with varying concentrations of 3-indoleacetic acid (IAA) and 6-benzylaminopurine (BAP). Addition of hormones in the culture medium significantly (P < 0.05) improved root and shoot emergence, seed germination and seedling survival. However, excised embryos cultured on the same medium did not develop. Hybrid seeds cultured on MS medium supplemented with different concentrations of IAA and BAP germinated within 6-14 days (SM001-07 × ST004-03) and 4-10 days (SM001-07 × San005-01). Optimal concentration of IAA and BAP for seed germination and seedling survival depended on hybrid type. Regenerated plantlets were successfully transferred to the field after initial acclimatization. High levels of heterosis observed for number of seeds/fruit and fruit breadth suggested an opportunity for developing F1 hybrids with desirable fruit characters for improved fruit yield.

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Polyethylene Glycol Induced Osmotic Stress Affects Germination and Seedling Establishment of Wheat Genotypes
Shatabdi Ghosh, Md. Abu Shahed, Arif Hasan Khan Robin
Plant Breed. Biotech. 2020;8(2):174-185.   Published online June 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.2.174

Wheat is globally an important cereal crop. Environmental stress, especially drought stress can play an important role in the reduction of plant growth, specifically during germination in arid and semi-arid regions. Polyethylene glycol (PEG) treated hydroponic conditions create negative osmotic potential which is compared with moisture deficit stress. The main
objective
of this study was to investigate the effects of PEG 6000 induced moderate osmotic stress on germination indices of 22 wheat varieties. In order to study the effects of osmotic stress on germination indices in wheat cultivars, an experiment was conducted, using a completely randomized design with three replications under two different levels of PEG-6000: 0% and 10%. PEG stress significantly reduced percent germination, shoot length and root length. PEG stress significantly increased root-shoot ratio and oven dry weight. Principal component analysis revealed response of traits of tolerant wheat varieties under osmotic stress. Correlation study revealed the significant relationships among germination indices. The variety BARI Gom-30 recorded comparatively higher root length (6 cm), shoot length (7.8 cm), root-shoot ratio (1.37) followed by the variety Sonalika whereas the variety Kalaysona recorded the lowest root length (2.7 cm) and shoot length (2.8 cm) under PEG stress. Evolved information of this research including selected traits such as germination percentage, root-shoot ratio and dry weight of seedlings could be exploited in wheat breeding program for drought and osmotic stress tolerance.

Citations

Citations to this article as recorded by  
  • Influence of osmotic stress on the activity of endosperm amylases and biomass accumulation in seedling during different wheat varieties seed germination
    Natalia Jelev, Alexandru Dascaliuc, Andrei Gore
    Studia Universitatis Moldaviae. Seria Științe ale Naturii.2026; (6(186)): 128.     CrossRef
  • Synthesis of chitosan-polyethylene glycol-based superabsorbent for enhanced water retention in agriculture
    Mohsan Nawaz, Masab Saeed, Malaika Zahoor, Saira Bibi, Shoaib Khan
    Journal of Polymer Research.2025;[Epub]     CrossRef
  • Spermine driven water deficit tolerance in early growth phases of sweet corn genotypes under hydroponic cultivation
    Tahoora Batool Zargar, Mawia Sobh, Oqba Basal, Tibor Janda, Magda Pál, Szilvia Veres
    Scientific Reports.2025;[Epub]     CrossRef
  • Exploring drought tolerance for germination traits of diverse wheat genotypes at seedling stage: a multivariate analysis approach
    Kashif Ahmed, Ghulam Shabbir, Mukhtar Ahmed
    BMC Plant Biology.2025;[Epub]     CrossRef
  • Ascertaining the Robust Drought Tolerant Wheat Germplasm for Sustainable Agriculture
    Hafiz Ghulam Muhu-Din Ahmed, Yawen Zeng, Muhammad Sajad, Tehreem Fatima, Noor Fatima, Ghulam Sabir Hussain, Muhammad Irfan Akram, Amjad Saeed, Muhammad Hamza Rafiq, Muhammad Ahtasham Mushtaq
    Polish Journal of Environmental Studies.2025; 34(3): 2991.     CrossRef
  • Genotype-dependent resilience mediated by melatonin in sweet corn
    Tahoora Batool Zargar, Mawia Sobh, Oqba Basal, Szilvia Veres
    BMC Plant Biology.2025;[Epub]     CrossRef
  • Screening of Ecotypes and Construction of Evaluation System for Drought Resistance during Seed Germination in Kudouzi (Sophora alopecuroides)
    Xiang Huang, Cunkai Luo, Xingxin Zhang, Lin Liu, Xiangcheng Zhou, Panxin Niu, Ping Jiang, Mei Wang, Guangming Chu
    Agronomy.2024; 14(10): 2295.     CrossRef
  • Prediction of Seed Viability in Wheat (Triticum aestivum L.) Using Near-Infrared Reflectance Spectroscopy
    Hee-Jong Woo, Kyung-Soon Kim, So Yeon Hong, Hyemyeong Yoon, Nayoung Ro, Gyu Taek Cho, Ho-Cheol Ko, Dong Su Yu
    Korean Journal of Breeding Science.2024; 56(4): 461.     CrossRef
  • Evaluation of drought stress effect on germination characteristics of some advanced dryland bread wheat lines
    Fatemeh Vafaee, Hamidreza Nooryazdan, Rahmatolah Karimizadeh
    Journal of Seed Research.2024; 11(1): 223.     CrossRef
  • Heat stress tolerance in wheat seedling: Clustering genotypes and identifying key traits using multivariate analysis
    Md. Mehedi Hasan, Md. Abdul Baset Mia, Jalal Uddin Ahmed, M. Abdul Karim, A.K.M. Aminul Islam, Mohammed Mohi-Ud-Din
    Heliyon.2024; 10(19): e38623.     CrossRef
  • In-vitro selection of drought tolerant doubled haploid rice lines using polyethylene glycol (PEG)
    Pradeep Goraguddi, Pawankumar Kharate, Shrinkhla Maurya, Zenu Jha
    Environment Conservation Journal.2023; 24(4): 52.     CrossRef
  • Multivariate Analysis of Morpho-Physiological Traits Reveals Differential Drought Tolerance Potential of Bread Wheat Genotypes at the Seedling Stage
    Mohammed Mohi-Ud-Din, Md. Alamgir Hossain, Md. Motiar Rohman, Md. Nesar Uddin, Md. Sabibul Haque, Jalal Uddin Ahmed, Akbar Hossain, Mohamed M. Hassan, Mohammad Golam Mostofa
    Plants.2021; 10(5): 879.     CrossRef
  • PEG-Induced Osmotic Stress Alters Root Morphology and Root Hair Traits in Wheat Genotypes
    Arif Hasan Khan Robin, Shatabdi Ghosh, Md. Abu Shahed
    Plants.2021; 10(6): 1042.     CrossRef
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Root Development and Anti-Oxidative Response of Rice Genotypes under Polyethylene Glycol Induced Osmotic Stress
Juthy Abedin Nupur, Afsana Hannan, Md. Abir Ul Islam, G H M Sagor, Arif Hasan Khan Robin
Plant Breed. Biotech. 2020;8(2):151-162.   Published online June 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.2.151

Osmotic stress is a kind of stress which is directly or indirectly related to all other abiotic stresses. Four rice varieties namely Binadhan-11 (with SUB1 gene), BRRI dhan52 (with SUB1 gene), Binadhan-7 and BRRI dhan71 were used to study the variation in root development and anti-oxidative response under osmotic stress conditions. Osmotic stress was induced by applying polyethylene glycol (4% PEG) in hydroponic solution. Treatment was given at the panicle initiation stage and leaf samples were collected at fourteen days after treatment to estimate antioxidant response in terms of ascorbate (APX) and peroxidase (POD) enzymatic activity. Roots were destructively harvested at 16 days after the stress imposition. The tested varieties showed significant differences in antioxidant responses under the stress condition such as high APX and POD in Binadhan-11 and BRRI dhan52. Significant injury at the 4th leaf position (the youngest leaf was the reference) was observed at 8 and 12 days after the treatment. Number of live leaves, shoot dry weight, density of second order lateral roots, number of phytomer (Pr) and total roots, number of roots at Pr2, main axis diameter at Pr1, main axis length at Pr1 varied significantly among the varieties × treatment combinations. Binadhan-11 and BRRI dhan52 showed comparatively higher osmotic stress tolerance compared to the other two varieties without SUB1 gene, viz., Binadhan-7 and BRRI dhan71. The varieties BRRI dhan52, and Binadhan-11 showed greater capacity to withstand osmotic stress can be further used to develop stress tolerant variety.

Citations

Citations to this article as recorded by  
  • Salinity and Polyethylene‐Glycol (PEG)‐Induced Osmotic Stress Alters the Early Vegetative Shoot and Root Morphology of Sweet Potato Genotypes in Hydroponic Culture
    Rebeka Sultana, Nikunjo Chakroborty, Jannatul Afrin, Yousuf Ali, Sarah Jabeen Mou, Jobadatun Naher, Arif Hasan Khan Robin
    New Zealand Journal of Botany.2026;[Epub]     CrossRef
  • Oxidative Stress in Rice (Oryza sativa): Mechanisms, Impact, and Adaptive Strategies
    Lady Edlenill J. Tavu, Mark Christian Felipe R. Redillas
    Plants.2025; 14(10): 1463.     CrossRef
  • Evaluating Wheat Yield and Nutrient Accumulation in Response to Foliar Application of Moringa Leaf Extract
    Israr Ahmed Baladi, Naheed Akhter Talpur, Zia-ul-Hassan Shah, Javaid Ahmed Shah, Khalid Hussain Talpur, Javaria Afzal Arain, Inzamam Ali Jamali, Afsar Ali Kalhoro
    Journal of Quality Assurance in Agricultural Sciences .2025; 5(1): 12.     CrossRef
  • Drought affects Fe deficiency‐induced responses in a purple durum wheat (Triticum turgidum subsp. durum) genotype
    G. Quagliata, M. D. G. Molina, G. Mannino, E. Coppa, M. N. Saidi, S. Palombieri, F. Sestili, G. Vigani, S. Astolfi
    Plant Biology.2025;[Epub]     CrossRef
  • Rye‐durum wheat 1BL.1RS translocation: implications for drought tolerance and nutritional status
    Giulia Quagliata, Moez Maghrebi, Miriam Marín‐Sanz, Samuela Palombieri, Francesco Sestili, Domenico Lafiandra, Francisco Barro, Gianpiero Vigani, Stefania Astolfi
    Physiologia Plantarum.2024;[Epub]     CrossRef
  • The most relevant drought-tolerant indices for selecting barley drought-tolerant genotypes
    Mbarek Ben Naceur, Hatem Cheikh-mhamed
    Frontiers in Life Sciences and Related Technologies.2024; 5(1): 15.     CrossRef
  • In vitro selection for drought and salt stress tolerance in rice: an overview
    Monika Sahu, Shrinkhla Maurya, Zenu Jha
    Plant Physiology Reports.2023; 28(1): 8.     CrossRef
  • Polyethylene glycol mediated improved shoot proliferation, foliar morpho-anatomy, and rooting of micropropagated shoots of Spathoglottis plicata Blume
    Manokari M, Priyadharshini S, Cokulraj M, Jayaprakash K, Abhijit Dey, Mohammad Faisal, Abdulrahman A. Alatar, Anshu Alok, Mahipal S. Shekhawat
    South African Journal of Botany.2022; 146: 897.     CrossRef
  • Crop Improvement and Abiotic Stress Tolerance Promoted by Moringa Leaf Extract
    Md. Abir Ul Islam, Juthy Abedin Nupur, Charles T. Hunter, Abdullah Al Mamun Sohag, Ashaduzzaman Sagar, Md. Sazzad Hossain, Mona F. A. Dawood, Arafat Abdel Hamed Abdel Latef, Marián Brestič, Md. Tahjib-UI-Arif
    Phyton.2022; 91(8): 1557.     CrossRef
  • PEG-Induced Osmotic Stress Alters Root Morphology and Root Hair Traits in Wheat Genotypes
    Arif Hasan Khan Robin, Shatabdi Ghosh, Md. Abu Shahed
    Plants.2021; 10(6): 1042.     CrossRef
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Review

A Review and Perspective on Soybean (Glycine max L.) Breeding for the Resistance to Phytophthora sojae in Korea
Ik-Hyun Jang, Sungwoo Lee
Plant Breed. Biotech. 2020;8(2):114-130.   Published online June 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.2.114

Phytophthora root and stem rot (PRR) of soybean is a severe disease that causes significant economic losses in soybean-growing countries. The causal agent, Phytophthora sojae, is a soil-borne oomycete that causes pre- and post-emergence damping-off of soybean in poorly drained soils. PRR has not been a severe problem in South Korea; however, as the cultivation of soybean in paddy fields recently increased, there is a growing interest because the incidence of PRR can be extensively expanded. R-gene mediated resistance is known as the main strategy for the management of this disease. On the other hand, partial resistance has also been known to provide more effective disease management than the Rps (Resistance to Phytophthora sojae) resistance. Responses of domestic soybean cultivars to a few P. sojae isolates were recently reported, while phenotypic distribution of numerous germplasms is mostly unknown. The
objective
s of this review are to summarize published studies conducted on PRR, to suggest future directions of genetic researches and breeding to the target pathogen. This review will discuss the followings; i) a brief introduction to PRR and the causal agent P. sojae, ii) types of genetic resistance to P. sojae and findings of genes/QTL conditioning to resistance, iii) changes in virulence pathotype of P. sojae populations, and iv) current status and perspective of genetic/genomic researches on the interaction of soybean and P. sojae in the South Korea.

Citations

Citations to this article as recorded by  
  • Identification and genetic analysis of candidate genes for resistance against Phytophthora sojae in soybean using a genome-wide association study
    Hye Rang Park, Su Vin Heo, Beom Kyu Kang, Hyoseob Seo, Eunsoo Lee, Jihee Park, Yun Woo Jang, Jeong Hyun Seo, Girim Park, Jun Hoi Kim, Yeong Hoon Lee, Won Young Han, Myung Chul Seo, Ji-Ung Jeung
    Frontiers in Plant Science.2025;[Epub]     CrossRef
  • Pathotypes and Simple Sequence Repeat (SSR)-Based Genetic Diversity of Phytophthora sojae Isolates in the Republic of Korea
    Ngoc Ha Luong, In-Jeong Kang, Hee Jin You, Sungwoo Lee
    Microorganisms.2025; 13(3): 478.     CrossRef
  • Identification of New Isolates of Phytophthora sojae and Selection of Resistant Soybean Genotypes
    Su Vin Heo, Hye Rang Park, Yun Woo Jang, Jihee Park, Beom Kyu Kang, Jeong Hyun Seo, Jun Hoi Kim, Ji Yoon Lee, Man Soo Choi, Jee Yeon Ko, Choon Song Kim, Sungwoo Lee, Tae-Hwan Jun
    The Plant Pathology Journal.2024; 40(3): 329.     CrossRef
  • Genetic dissection of resistance to Phytophthora sojae using genome-wide association and linkage analysis in soybean [Glycine max (L.) Merr.]
    Hee Jin You, Ik Hyun Jang, Jung-Kyung Moon, In-Jeong Kang, Ji-Min Kim, Sungtaeg Kang, Sungwoo Lee
    Theoretical and Applied Genetics.2024;[Epub]     CrossRef
  • Genome-Wide Association Study for Resistance to Phytophthora sojae in Soybean [Glycine max (L.) Merr.]
    Hee Jin You, Ruihua Zhao, Yu-Mi Choi, In-Jeong Kang, Sungwoo Lee
    Plants.2024; 13(24): 3501.     CrossRef
  • Responses of Soil Microbial Communities in Soybean–Maize Rotation to Different Fertilization Treatments
    Yunlong Wang, Liqiang Zhang, Fangang Meng, Zixi Lou, Xiaoya An, Xinbo Jiang, Hongyan Zhao, Wei Zhang
    Agronomy.2023; 13(6): 1590.     CrossRef
  • Soybean Variety Saedanbaek Confers a New Resistance Allele to Phytophthora sojae
    Hee Jin You, Kyu-Chan Shim, In-Jeong Kang, Ji-Min Kim, Sungtaeg Kang, Sungwoo Lee
    Plants.2023; 12(23): 3957.     CrossRef
  • Progress and prospectus in genetics and genomics of Phytophthora root and stem rot resistance in soybean (Glycine max L.)
    Subhash Chandra, Mukesh Choudhary, Pravin K. Bagaria, Vennampally Nataraj, Giriraj Kumawat, Jeet Ram Choudhary, Humira Sonah, Sanjay Gupta, Shabir Hussain Wani, Milind B. Ratnaparkhe
    Frontiers in Genetics.2022;[Epub]     CrossRef
  • Breeding for disease resistance in soybean: a global perspective
    Feng Lin, Sushil Satish Chhapekar, Caio Canella Vieira, Marcos Paulo Da Silva, Alejandro Rojas, Dongho Lee, Nianxi Liu, Esteban Mariano Pardo, Yi-Chen Lee, Zhimin Dong, Jose Baldin Pinheiro, Leonardo Daniel Ploper, John Rupe, Pengyin Chen, Dechun Wang, He
    Theoretical and Applied Genetics.2022; 135(11): 3773.     CrossRef
  • Gene-Based Allele Specific Marker for Resistance to Phytophthora sojae in Soybean (Glycine max L.)
    Young Eun Jang, Sungwoo Lee
    Plant Breeding and Biotechnology.2021; 9(2): 164.     CrossRef
  • Differences in Cotyledon Color and Harvest Period Affect the Contents of Major Isoflavones and Anthocyanins in Black Soybeans
    Yu-Mi Choi, Hyemyeong Yoon, Myoung-Jae Shin, Yoonjung Lee, Sukyeung Lee, On Sook Hur, Na Young Ro, Ho-Cheol Ko, Jeongyoon Yi, Sang Hoon Lee, Heon-Woong Kim, Yu Jin Hwang, Myung-Chul Lee, Kebede Taye Desta
    Plant Breeding and Biotechnology.2021; 9(1): 65.     CrossRef
  • Genetic Mapping of a Resistance Locus to Phytophthora sojae in the Korean Soybean Cultivar Daewon
    Ik-Hyun Jang, In Jeong Kang, Ji-Min Kim, Sung-Taeg Kang, Young Eun Jang, Sungwoo Lee
    The Plant Pathology Journal.2020; 36(6): 591.     CrossRef
  • Two Isolate-specific Resistance Loci for Phytophthora sojae in the Soybean Socheong2
    Young Eun Jang, Ik Hyun Jang, In Jeong Kang, Ji-Min Kim, Sung-Taeg Kang, Sungwoo Lee
    Korean Journal of Breeding Science.2020; 52(4): 398.     CrossRef
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Research Article

Increasing New Root Length Reflects Survival Mechanism of Rice (Oryza sativa L.) Genotypes under PEG-Induced Osmotic Stress
Afsana Hannan, Lutful Hassan, Md. Najmol Hoque, Md. Tahjib-Ul- Arif, Arif Hasan Khan Robin
Plant Breed. Biotech. 2020;8(1):46-57.   Published online March 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.1.46

Rice is globally one of the most important cereal crops that faces osmotic stress under any kind of abiotic stresses. An experiment was conducted under controlled condition to study the effects of polyethylene glycol (PEG) induced osmotic stress on root and root hair morphology and associated biochemical traits in four morphologically diverse rice genotypes. Plants were grown hydroponically. Two treatments, 0% (control) and 5% PEG 6000 (w/v), were imposed on 38 days old plants for 17 days’ duration. Main root axis length at first three youngest root bearing phytomers (Pr1-Pr3) was increased in Binadhan-11 but decreased in Binadhan-7 and BRRI dhan 71 under 5% PEG treatment compared to control. This result indicated that Binadhan-11 increased new root length perhaps to explore stress free environment. Length of L-type first order lateral root was also significantly increased by 2.03 fold in Binadhan-11 under 5% PEG treatment compared to control. Density and length of root hairs were increased at first order lateral roots in Binadhan-11 under 5% PEG treatment compared to control treatment those contributed largely to root surface area. Measurements of H2O2 and MDA revealed that Binadhan-11 was less affected by the oxidative damage caused by PEG. Data provides insight into the root morphological plasticity of four morphologically diverse rice varieties under PEG-induced osmotic stress.

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  • Bacterial Endophytes and Silicon Enhance Root System Plasticity of Upland Rice Under Combined Water and Phosphorus Deficit
    Rodrigo Silva de Oliveira, Akintunde Abiodun Ajulo, Anna Cristina Lanna, Marta Cristina Corsi de Filippi
    Journal of Soil Science and Plant Nutrition.2026; 26(1): 907.     CrossRef
  • Salinity and Polyethylene‐Glycol (PEG)‐Induced Osmotic Stress Alters the Early Vegetative Shoot and Root Morphology of Sweet Potato Genotypes in Hydroponic Culture
    Rebeka Sultana, Nikunjo Chakroborty, Jannatul Afrin, Yousuf Ali, Sarah Jabeen Mou, Jobadatun Naher, Arif Hasan Khan Robin
    New Zealand Journal of Botany.2026;[Epub]     CrossRef
  • Highway to stress: Proline dynamics in tomato plants under osmotic disturbances
    Clara Konrad, Sofia Spormann, Pedro Nadais, Maria Martins, Cristiano Soares, Fernanda Fidalgo
    Plant Physiology and Biochemistry.2026; 237: 111496.     CrossRef
  • Unravelling root system architecture plasticity in response to abiotic stresses in maize
    Garudapalya Muniswamy Keerthi, Mallana Gowdra Mallikarjuna, Shilendra Kumar Jha, Rakesh Pandey, Palanisamy Veeraya, Hirenallur Chandappa Lohithaswa, Viswanathan Chinnusamy
    Scientific Reports.2025;[Epub]     CrossRef
  • Phytohormonal strategies for managing crop responses to abiotic stresses: a review
    Md. Najmol Hoque, Afsana Hannan, Shahin Imran, Fatema Tuz-zohra, Tania Sultana, Md. Mahdi Hasan Seen, Syed Sakib Tahmid, Tanvir Mahmood Fahim, A. K. M. Mominul Islam, Mohammad Saidur Rhaman
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    Yunus Emre Arvas, Muhammed Said Yolci, Sevgi Marakli
    Genetic Resources and Crop Evolution.2023; 70(2): 427.     CrossRef
  • Plant Growth-Promoting Rhizobacteria-Mediated Adaptive Responses of Plants Under Salinity Stress
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    Journal of Plant Growth Regulation.2023; 42(3): 1307.     CrossRef
  • Seed Priming with MeJa Prevents Salt-Induced Growth Inhibition and Oxidative Damage in Sorghum bicolor by Inducing the Expression of Jasmonic Acid Biosynthesis Genes
    Takalani Mulaudzi, Gershwin Sias, Mulisa Nkuna, Nzumbululo Ndou, Kaylin Hendricks, Vivian Ikebudu, Abraham J. Koo, Rachel F. Ajayi, Emmanuel Iwuoha
    International Journal of Molecular Sciences.2023; 24(12): 10368.     CrossRef
  • Nitrogen Addition Alleviates Cadmium Toxicity in Eleocarpus glabripetalus Seedlings
    Meihua Liu, Mengjiao Shi, Haili Gao, Yu Zheng, Lita Yi
    Forests.2023; 14(6): 1264.     CrossRef
  • Phenotypic plasticity in Cucurbita maxima and C. moschata seedlings as a measure of drought stress tolerance under pot screening
    Philisiwe Felicity Mhlanga, Shakira Shaik
    South African Journal of Botany.2023; 159: 290.     CrossRef
  • Relative contribution of different members of OsDREB gene family to osmotic stress tolerance in indica and japonica ecotypes of rice
    K. Chakraborty, P. Jena, S. Mondal, G. K. Dash, S. Ray, M. J. Baig, P. Swain
    Plant Biology.2022; 24(2): 356.     CrossRef
  • Comparative analysis of drought-responsive physiological and transcriptome in broomcorn millet (Panicum miliaceum L.) genotypes with contrasting drought tolerance
    Yuhao Yuan, Long Liu, Yongbin Gao, Qinghua Yang, Kongjun Dong, Tianpeng Liu, Baili Feng
    Industrial Crops and Products.2022; 177: 114498.     CrossRef
  • Application of consecutive polyethylene glycol treatments for modeling the seminal root growth of rice under water stress
    Pepi Nur Susilawati, Ryosuke Tajima, Yuti Giamerti, Yi Yang, Muhammad Prama Yufdy, Iskandar Lubis, Koki Homma
    Scientific Reports.2022;[Epub]     CrossRef
  • Polyethylene glycol mediated improved shoot proliferation, foliar morpho-anatomy, and rooting of micropropagated shoots of Spathoglottis plicata Blume
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    South African Journal of Botany.2022; 146: 897.     CrossRef
  • Multivariate Analysis of Morpho-Physiological Traits Reveals Differential Drought Tolerance Potential of Bread Wheat Genotypes at the Seedling Stage
    Mohammed Mohi-Ud-Din, Md. Alamgir Hossain, Md. Motiar Rohman, Md. Nesar Uddin, Md. Sabibul Haque, Jalal Uddin Ahmed, Akbar Hossain, Mohamed M. Hassan, Mohammad Golam Mostofa
    Plants.2021; 10(5): 879.     CrossRef
  • PEG-Induced Osmotic Stress Alters Root Morphology and Root Hair Traits in Wheat Genotypes
    Arif Hasan Khan Robin, Shatabdi Ghosh, Md. Abu Shahed
    Plants.2021; 10(6): 1042.     CrossRef
  • Time Course of Root Axis Elongation and Lateral Root Formation in Perennial Ryegrass (Lolium perenne L.)
    Arif Hasan Khan Robin, Louis John Irving, Jim Crush, Hans Schnyder, Fernando Alfredo Lattanzi, Cory Matthew
    Plants.2021; 10(8): 1677.     CrossRef
  • Polyethylene Glycol Induced Osmotic Stress Affects Germination and Seedling Establishment of Wheat Genotypes
    Shatabdi Ghosh, Md. Abu Shahed, Arif Hasan Khan Robin
    Plant Breeding and Biotechnology.2020; 8(2): 174.     CrossRef
  • Root Development and Anti-Oxidative Response of Rice Genotypes under Polyethylene Glycol Induced Osmotic Stress
    Juthy Abedin Nupur, Afsana Hannan, Abir Ul Islam, G H M Sagor, Arif Hasan Khan Robin
    Plant Breeding and Biotechnology.2020; 8(2): 151.     CrossRef
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Review Article

Role of Cytokinins in Clubroot Disease Development
Arif Hasan Khan Robin, Mohammad Rashed Hossain, Hoy-Taek Kim, Ill-Sup Nou, Jong-In Park
Plant Breed. Biotech. 2019;7(2):73-82.   Published online June 1, 2019
DOI: https://doi.org/10.9787/PBB.2019.7.2.73

Clubroot, caused by the obligate biotrophic protist Plasmodiophora brassicae is a devastating disease of crucifers that causes substantial economic loss worldwide. The disease is characterized by the formation of galls in the root and hypocotyl of infected plants which restricts host vascular cambium development inhibiting efficient water and nutrient uptake by the plant. The pathogen-driven interference of hormonal homeostasis, particularly of cytokinin, in the root tissue is intricately linked with induction of hypertrophy and cell divisions leading to formation of galls. Levels of cytokinins and cell division generally increase at the onset of the disease which declines at the later stages of gall formation. The genes involved cytokinin biosynthesis such as cytokinin oxidase/dehydrogenases and isopentenyl transferases shows differential expressions during clubroot infection and gall expansion in root tissues. Wider understanding of the roles of cytokinins and associated genes along the development of the disease will be helpful in unravelling plants defense mechanism against clubroot disease.

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  • Genome-Wide Identification, Expression, and Protein Analysis of CKX and IPT Gene Families in Radish (Raphanus sativus L.) Reveal Their Involvement in Clubroot Resistance
    Haohui Yang, Xiaochun Wei, Weiwei Lei, Henan Su, Yanyan Zhao, Yuxiang Yuan, Xiaowei Zhang, Xixiang Li
    International Journal of Molecular Sciences.2024; 25(16): 8974.     CrossRef
  • Bioinformatics and functional analysis of EDS1 genes in Brassica napus in response to Plasmodiophora brassicae infection
    Jalal Eldeen Chol Atem, Longcai Gan, Wenlin Yu, Fan Huang, Yanyan Wang, Amanullah Baloch, Chinedu Charles Nwafor, Alpha Umaru Barrie, Peng Chen, Chunyu Zhang
    Plant Science.2024; 347: 112175.     CrossRef
  • Genome-wide identification and analysis of cytokinin dehydrogenase/oxidase (CKX) family genes in Brassica oleracea L. reveals their involvement in response to Plasmodiophora brassicae infections
    Mingzhao Zhu, Yong Wang, Shujin Lu, Limei Yang, Mu Zhuang, Yangyong Zhang, Honghao Lv, Zhiyuan Fang, Xilin Hou
    Horticultural Plant Journal.2022; 8(1): 68.     CrossRef
  • Early-stage responses to Plasmodiophora brassicae at the transcriptome and metabolome levels in clubroot resistant and susceptible oilseed Brassica napus
    Dinesh Adhikary, Anna Kisiala, Ananya Sarkar, Urmila Basu, Habibur Rahman, Neil Emery, Nat N V Kav
    Molecular Omics.2022; 18(10): 991.     CrossRef
  • A Novel Target (Oxidation Resistant 2) in Arabidopsis thaliana to Reduce Clubroot Disease Symptoms via the Salicylic Acid Pathway without Growth Penalties
    Regina Mencia, Elina Welchen, Susann Auer, Jutta Ludwig-Müller
    Horticulturae.2021; 8(1): 9.     CrossRef
  • Comparative transcriptome analysis of canola carrying clubroot resistance from ‘Mendel’ or Rutabaga and the development of molecular markers
    Aarohi Summanwar, Mehdi Farid, Urmila Basu, Nat Kav, Habibur Rahman
    Physiological and Molecular Plant Pathology.2021; 114: 101640.     CrossRef
  • Expression and Role of Biosynthetic, Transporter, Receptor, and Responsive Genes for Auxin Signaling during Clubroot Disease Development
    Arif Hasan Khan Robin, Gopal Saha, Rawnak Laila, Jong-In Park, Hoy-Taek Kim, Ill-Sup Nou
    International Journal of Molecular Sciences.2020; 21(15): 5554.     CrossRef
  • Demystifying biotrophs: FISHing for mRNAs to decipher plant and algal pathogen–host interaction at the single cell level
    Julia Badstöber, Claire M. M. Gachon, Jutta Ludwig-Müller, Adolf M. Sandbichler, Sigrid Neuhauser
    Scientific Reports.2020;[Epub]     CrossRef
  • Expression and Role of Response Regulating, Biosynthetic and Degrading Genes for Cytokinin Signaling during Clubroot Disease Development
    Rawnak Laila, Arif Hasan Khan Robin, Jong-In Park, Gopal Saha, Hoy-Taek Kim, Md. Abdul Kayum, Ill-Sup Nou
    International Journal of Molecular Sciences.2020; 21(11): 3896.     CrossRef
  • Biocontrol arsenals of bacterial endophyte: An imminent triumph against clubroot disease
    Ayesha Ahmed, Shahzad Munir, Pengfei He, Yongmei Li, Pengbo He, Wu Yixin, Yueqiu He
    Microbiological Research.2020; 241: 126565.     CrossRef
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Research Article

Identification of Quantitative Trait Loci for Vigorous Root Development under Water-Deficiency Conditions in Rice
Jae-Hyuk Han, Na-Hyun Shin, Su Jang, Yeisoo Yu, Joong Hyoun Chin, Soo-Cheul Yoo
Plant Breed. Biotech. 2018;6(2):147-158.   Published online June 1, 2018
DOI: https://doi.org/10.9787/PBB.2018.6.2.147

Seedling vigor in drought stress conditions is an important characteristic of the dry direct-seeded rice system. The drought stress in the seedling stage disrupts seed germination and delays the establishment of seedlings. However, little is known about the genetic mechanism of seedling vigor in drought conditions. The identification of quantitative trait loci (QTL) was conducted using 162 recombinant inbred lines (RILs) derived from a cross between two rice varieties—a Tongil-type Milyang23 and a temperate japonica Tong88-7. The seedling vigor of these RILs was characterized by measuring 10 morphological traits of the seedlings grown under drought conditions. The Tong88-7 seedlings showed significantly higher values than the Milyang23 seedlings for all traits. The genotyping-by-sequencing method was used to construct a map of 6140 single nucleotide polymorphisms. Six main-effect QTLs (M-QTLs) associated with seedling vigor traits under drought stress were identified on chromosomes 9 and 11. In particular, five out of these six QTLs were located on chromosome 11, explaining the phenotypic variances of 4.3% through 10.1%. In addition, 21 epistatic QTLs (E-QTLs) were detected, and the 27 loci involved in this interaction were distributed on 11 chromosomes. Both M-QTLs and E-QTLs detected in this study would be useful in breeding programs to develop elite rice varieties especially adapted to dry direct-seeded rice system.

Citations

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  • Analysis of Seed Vigor and Grain Quality Traits under Accelerated Aging Treatment in japonica Rice
    Kyeongmin Kang, Seung Young Lee, Su-Kyung Ha, Gileung Lee, Jae-Ryoung Park, Mina Jin, Jung-Pil Suh, Youngjun Mo, Hyun-Sook Lee
    Korean Journal of Breeding Science.2025; 57(3): 217.     CrossRef
  • The resilience of rice under water stress will be driven by better roots: Evidence from root phenotyping, physiological, and yield experiments
    Sadiah Shafi, Insha Shafi, Aaqif Zaffar, Sajad Majeed Zargar, Asif B. Shikari, Anuj Ranjan, P.V. Vara Prasad, Parvaze A. Sofi
    Plant Stress.2023; 10: 100211.     CrossRef
  • Hydraulic conductance and xylem vessel diameter of young maize roots subjected to sustained water‐deficit
    Nahid Jafarikouhini, Thomas R. Sinclair
    Crop Science.2023; 63(4): 2458.     CrossRef
  • Shaping the root system architecture in plants for adaptation to drought stress
    Alok Ranjan, Ragini Sinha, Sneh L. Singla‐Pareek, Ashwani Pareek, Anil Kumar Singh
    Physiologia Plantarum.2022;[Epub]     CrossRef
  • Genetics and genomics of root system variation in adaptation to drought stress in cereal crops
    Md Nurealam Siddiqui, Jens Léon, Ali A Naz, Agim Ballvora, Miriam Gifford
    Journal of Experimental Botany.2021; 72(4): 1007.     CrossRef
  • Phenotyping Root Systems in a Set of Japonica Rice Accessions: Can Structural Traits Predict the Response to Drought?
    Paulo Henrique Ramos Guimarães, Isabela Pereira de Lima, Adriano Pereira de Castro, Anna Cristina Lanna, Patrícia Guimarães Santos Melo, Marcel de Raïssac
    Rice.2020;[Epub]     CrossRef
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Review Article

How Durable is Root Knot Nematode Resistance in Tomato?
M. Harunur Rashid, M. H. Al-Mamun, M. Nazim Uddin
Plant Breed. Biotech. 2017;5(3):143-162.   Published online September 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.3.143

Among the plant parasitic nematodes, root knot nematode (RKN) is the most devastating in tomato growing regions. Controlling RKN mostly relies on nematicides. Since chemical application is limited due to adverse environmental effect, alternative approaches are required. Although there are some alternatives, but resistance cultivars are getting popularity in the farmer’s field because of simplicity, cost-effective and environment safety. Genes conferring resistance to RKN have already been identified followed by the introgression into elite cultivars. Currently, natural resistance genes (R genes) are used in conventional breeding programmes. Simultaneously, molecular research is going on to characterize and map the linked markers for the detected resistant phenotypes. Currently, it is a prominent threat to maintain the durability of existing R genes. However, durability of host resistance govern by co-evolution of resistance genes from plants and (a)virulence genes from nematodes. So, understanding the mechanisms underlying co-evolution is essential for the durability of R genes. Here we review the existing potential natural resistance in tomato against RKN, currently used resistance mechanisms between RKN and tomato, influential factors of durability of natural resistance genes and opportunity to get more durable resistance in tomato.

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  • Emerging Threat of Meloidogyne enterolobii: Pathogenicity Mechanisms and Sustainable Management Strategies in the Context of Global Change
    Mingming Shi, Rui Liu, D. U. Nilunda Madhusanka, Yonggang Liu, Ning Luo, Wei Guo, Jianlong Zhao, Huixia Li, Zhenchuan Mao
    Microbiology Research.2025; 16(8): 165.     CrossRef
  • Grafting Tomato Scions on Root Knot Nematode (RKN)-Resistant Brinjal Rootstocks Complemented with Biocontrol Agents as an Integrated Nematode Management (INM) Strategy for the Development of RKN-Resistant Tomato
    Anil K. Poonia, Bhupendra Koul, Subhash Kajla, Meerambika Mishra, Muhammad Fazle Rabbee
    Pathogens.2025; 14(12): 1257.     CrossRef
  • Metabolomics and histopathological analysis of two tomato cultivars after co-infection with soil-borne pathogens (Southern root-knot nematode and Fusarium wilt fungus)
    Aatika Sikandar, Wenkai Rao, Heliang He, Bochang Chen, Xiongbiao Xu, Haiyan Wu
    Plant Physiology and Biochemistry.2024; 215: 108983.     CrossRef
  • Identification and characterization of a virulent population of Meloidogyne graminicola
    Hue Thi Nguyen, Seng Vang, Ngan Thi Phan, Pierre Czernic, Phap Quang Trinh, Cuong Viet Ha, Jamel Aribi, Anne-Sophie Masson, Malyna Suong, Stéphane Bellafiore
    Australasian Plant Pathology.2023; 52(5): 391.     CrossRef
  • Plant defense responses in monocotyledonous and dicotyledonous host plants during root-knot nematode infection
    Arnika Przybylska, Aleksandra Obrępalska-Stęplowska
    Plant and Soil.2020; 451(1-2): 239.     CrossRef
  • Tomato Natural Resistance Genes in Controlling the Root-Knot Nematode
    Ahmed H. El-Sappah, Islam M. M., Hamada H. El-awady, Shi Yan, Shiming Qi, Jingyi Liu, Guo-ting Cheng, Yan Liang
    Genes.2019; 10(11): 925.     CrossRef
  • Cucumis metuliferus reduces Meloidogyne incognita virulence against the Mi1.2 resistance gene in a tomato–melon rotation sequence
    Alejandro Expósito, Sergi García, Ariadna Giné, Nuria Escudero, Francisco Javier Sorribas
    Pest Management Science.2019; 75(7): 1902.     CrossRef
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    Inad D. Abood, Sarah T. Hasan
    International Journal of Biosciences (IJB).2018; : 417.     CrossRef
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Research Articles
Reaction of Soybean Cyst Nematode Resistant Plant Introductions to Root-Knot and Reniform Nematodes
Jeong-Dong Lee, Hyun-Jee Kim, Robert T. Robbins, James A. Wrather, Jason Bond, Henry T. Nguyen, J. Grover Shannon
Plant Breed. Biotech. 2015;3(4):346-354.   Published online November 30, 2015
DOI: https://doi.org/10.9787/PBB.2015.3.4.346

Soybean cyst [SCN, Heterodera glycines Ichinohe], southern root-knot [RKN, Meloidogyne incognita (Kofoid and White) Chitwood] and reniform nematodes [RN, Rotylenchlus reniformis (Linford and Oliveria)] are common plant-parasitic nematode species in southern US fields. Each nematode individually or collectively causes significant economic losses to field grown soybean. A subset of 120 soybean plant introductions (PIs) selected from the USDA Soybean Germplasm Collection have been shown to be resistant to one or more SCN populations (HG Types); however, many of these PIs have not been screened for resistance to either RKN or RN. The
objective
of this research was to evaluate these germplasm accessions for resistance to RKN and RN. The evaluation for RKN resistance was conducted in RKN infested field plantings after potatoes near Charleston, MO in 2006 and 2007. The evaluation for RN resistance was performed in a greenhouse at Fayetteville, AR, in 2007. Out of these accessions, 64 PIs were identified with high or moderate resistance to RKN. Of these 64 lines, 24 accessions showed good resistance to both RKN and RN. These new sources of resistance to multiple nematodes will be valuable materials for soybean breeding programs to develop new resistant cultivars that can overcome yield losses caused by one or more of these nematode species.

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    Himanshu Yadav, Philip A. Roberts, Damar Lopez-Arredondo
    Plants.2025; 14(9): 1321.     CrossRef
  • Evaluation Soybean Cultivars for Reaction to Heterodera glycines Populations HG Types 7 and 1.3.4.7 in Northeast China
    Jingsheng Chen, Yuanyuan Zhou, Yanfeng Hu, Di Zhao, Changjun Zhou, Rujie Shi, Miao Sun, Li Zhang, Guowei Chen, Haiyan Li, Lijie Chen, Guosheng Xiao
    Life.2023; 13(1): 248.     CrossRef
  • Development of SNP molecular markers associated with resistance to reniform nematode in soybean using KASP genotyping
    Juliet E. Wilkes, Benjamin Fallen, Chris Saski, Paula Agudelo
    Euphytica.2023;[Epub]     CrossRef
  • Registration of ‘S16‐11644C’: A maturity group IV soybean cultivar with high‐yielding performance and broad disease resistance
    Pengyin Chen, J. Grover Shannon, Dongho Lee, Matheus Ogando do Granja, Md Liakat Ali, Caio Canella Vieira, Yi‐Chen Lee, Emanuel Ferrari do Nascimento, Andrew Scaboo, Melissa Crisel, Scotty Smothers, Michael Clubb, Stewart Selves, Henry T. Nguyen, Zenglu L
    Journal of Plant Registrations.2023; 17(1): 67.     CrossRef
  • Controle de soja voluntária em áreas cultivadas com Crotalaria spectabilis
    Gustavo de Souza Oliveira, Guilherme Braga Pereira Braz, Dieimisson Paulo Almeida, Sergio de Oliveira Procópio, Silvio Vasconcelos de Paiva Filho, Matheus de Freitas Souza, Gustavo André Simon
    Revista de Ciências Agroveterinárias.2023; 22(3): 509.     CrossRef
  • Breeding for disease resistance in soybean: a global perspective
    Feng Lin, Sushil Satish Chhapekar, Caio Canella Vieira, Marcos Paulo Da Silva, Alejandro Rojas, Dongho Lee, Nianxi Liu, Esteban Mariano Pardo, Yi-Chen Lee, Zhimin Dong, Jose Baldin Pinheiro, Leonardo Daniel Ploper, John Rupe, Pengyin Chen, Dechun Wang, He
    Theoretical and Applied Genetics.2022; 135(11): 3773.     CrossRef
  • ‘S16‐14730C’: A high‐yielding conventional soybean cultivar with indeterminate growth habit and multiple disease resistance adapted to the Mid‐South
    P. Chen, G. Shannon, A. Scaboo, M. Crisel, S. Smothers, M. Clubb, S. Selves, C. C. Vieira, M. L. Ali, D. Lee, N. Lord, H. T. Nguyen, Z. Li, M. G. Mitchum, J. Bond, C. Meinhardt, M. Usovsky, S. Li, A. Mengistu, B. Zhang, L. Mozzoni, R. T. Robbins
    Journal of Plant Registrations.2022; 16(2): 287.     CrossRef
  • Classification Methods and Identification of Reniform Nematode Resistance in Known Soybean Cyst Nematode-Resistant Soybean Genotypes
    Mariola Usovsky, Robert T. Robbins, Juliet Fultz Wilkes, Devany Crippen, Vijay Shankar, Tri D. Vuong, Paula Agudelo, Henry T. Nguyen
    Plant Disease.2022; 106(2): 382.     CrossRef
  • Genome-wide association study for resistance to the Meloidogyne javanica causing root-knot nematode in soybean
    Jean Carlos Alekcevetch, André Luiz de Lima Passianotto, Everton Geraldo Capote Ferreira, Adriana Brombini dos Santos, Danielle Cristina Gregório da Silva, Waldir Pereira Dias, François Belzile, Ricardo Vilela Abdelnoor, Francismar Correa Marcelino-Guimar
    Theoretical and Applied Genetics.2021; 134(3): 777.     CrossRef
  • Evaluation of Soybean Germplasm for Resistance to Multiple Nematode Species: Heterodera glycines, Meloidogyne incognita, and Rotylenchulus reniformis
    Mariola Klepadlo, Clinton G. Meinhardt, Tri D. Vuong, Gunvant Patil, Nicole Bachleda, Heng Ye, Robert T. Robbins, Zenglu Li, J. Grover Shannon, Pengyin Chen, Khalid Meksem, Henry T. Nguyen
    Crop Science.2018; 58(6): 2511.     CrossRef
  • Quantitative trait loci mapping of Meloidogyne incognita and M. hapla resistance in a recombinant inbred line population of soybean
    Chunjie Li, Jialin Wang, Jia You, Xinpeng Wang, Baohui Liu, Jun Abe, Fanjiang Kong, Congli Wang
    Nematology.2018; 20(6): 525.     CrossRef
  • Advancements in breeding, genetics, and genomics for resistance to three nematode species in soybean
    Ki-Seung Kim, Tri D. Vuong, Dan Qiu, Robert T. Robbins, J. Grover Shannon, Zenglu Li, Henry T. Nguyen
    Theoretical and Applied Genetics.2016; 129(12): 2295.     CrossRef
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QTL Mapping of Rice Root Traits at Different NH4+ Levels in Hydroponic Condition
Pyeong-Sook Kim, Dong-Min Kim, Ju-Won Kang, Hyun-Sook Lee, Sang-Nag Ahn
Plant Breed. Biotech. 2015;3(3):244-252.   Published online September 30, 2015
DOI: https://doi.org/10.9787/PBB.2015.3.3.244

This study was initiated to identify quantitative trait loci (QTL) involved in root system development by measuring root length and weight of rice seedlings grown in hydroponic culture condition. Growth conditions for estimating the root elongation were set up to supply NH4+ as a single nitrogen source. Four rice accessions and 40 introgression lines (ILs) derived from a cross between ‘Ilpumbyeo’, a temperate japonica variety, and ‘Moroberekan’, a tropical japonica accession, were used to detect QTL for two root traits of seedlings grown in 0, 250 and 500 μM NH4+. Seven chromosomal regions were found to be involved in root elongation. The qRW6 QTL detected on the long-arm of chromosome 6 promoted root weight and the ‘Moroberekan’ allele at this QTL was associated with enhanced root weight at 250 μM NH4+ concentration. The Moroberekan alleles were beneficial at all loci except for qRW4 at which the Ilpumbyeo allele increased root weight under 0, 250 and 500 μM NH4+. A field trial was conducted for selected four ILs to know whether the introgressed Moroberekan segments harboring the beneficial QTL were associated with effects on other agronomic traits. No significant difference was detected between four ILs and Ilpumbyeo for days to heading and culm length. Two lines showed significant difference from Ilpumbyeo in spikelets per panicle and 1,000 grain weight, and the difference might be attributed to the Moroberekan segment on chromosome 6. Our QTL results indicate that the Moroberekan introgression on chromosome 6 flanked by RM162-RM3430 has the potential to enhance root traits and yield potential in the temperate japonica background.

Citations

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  • Identification of shoot and root genomic regions in response to nitrogen deficiency tolerance in rice through the use of rice back cross recombinant inbred lines (BRILs)
    Abdul Malik Solangi, Hira Khanzada, Ghulam Mustafa Wassan, Adnan Rasheed, Ayaz Ali Keerio, Huijie Li, Saba Khanzada, Muhammad Faheem, Mashooq Ali Laghari, Jianmin Bian, Xiaohua Pan, Ziming Wu
    Journal of Plant Biochemistry and Biotechnology.2023; 32(1): 40.     CrossRef
  • Genome-wide association study and transcriptome analysis reveal new QTL and candidate genes for nitrogen‐deficiency tolerance in rice
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Selection of Melon Genotypes with Resistance to Fusarium Wilt and Monosporascus Root Rot for Rootstocks
Dong Kum Park, Seon-Hye Son, Su Kim, Woo Moon Lee, Hee Ju Lee, Hak Soon Choi, Eun Young Yang, Won Byoung Chae, Ho-Cheol Ko, Yun-Chan Huh
Plant Breed. Biotech. 2013;1(3):277-282.   Published online September 30, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.3.277

A panel of 65 melon germplasm was used to screen for resistance to Fusarium oxysporum f. sp. melonis (Fom) and Monosporascus cannonballus. The screening test revealed 35 accessions that are highly resistant to Fom race 1 and 11 accessions with high resistance to M. cannonballus. A total of four accessions, ‘K134068’, ‘K133069’, ‘Wondae’ and ‘PI 414723’, showing resistance to both pathogens were selected as candidates for melon rootstock. Yield and quality of fruits harvested from ‘Earl’s elite’ (Muskmelon, Reticulatus Group) grafted onto the selected melon rootstocks were found comparable to or better than those of non-grafted melons. Nearly negligible incidence of fruit fermentation was observed when ‘Homerunstar’ (Honeydew type, Inodorus Group) was grafted with the selected melon rootstocks, unlike when it was grafted onto ’Shintozwa’ (Cucurbita spp.) rootstock. The selected melon accessions with resistance to Fusarium wilt and Monosporascus root rot are considered to be potential and valuable genetic resources for breeding program of melon.

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    Lingyu Wang, Qiuxia Yi, Panpan Yu, Sunjeet Kumar, Xuyang Zhang, Chenxi Wu, Zhenglong Weng, Mengyu Xing, Kaisen Huo, Yanli Chen, Guopeng Zhu
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    A. Flores-León, R. Martí, M. Valcarcel, S. Roselló, J. Beltrán, S. García-Martínez, J.J. Ruiz, C. Gisbert, J. Cebolla-Cornejo, B. Picó
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  • Molecular identification and phylogenetic analysis of different races of Fusarium oxysporum f.sp. Melonis in muskmelon using RAPD markers under Punjab conditions
    Gurjot Singh, Daljeet Singh Buttar, Narinder Singh, Sukhman Kaur Aulakh, Sat Pal Sharma, Mandeep Singh Hunjan
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  • Greenhouse Evaluation of Melon Rootstock Resistance to Monosporascus Root Rot and Vine Decline as Well as of Yield and Fruit Quality in Grafted ‘Inodorus’ Melons
    Yoonah Jang, Yun-Chan Huh, Dong-Kum Park, Boheum Mun, Sanggyu Lee, Yeongcheol Um
    Horticultural Science and Technology.2014; 32(5): 614.     CrossRef
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Observational Study on the Recovery from Root Lodging at Flowering Time and Yield Reduction in Maize (Zea mays L.)
Yoon-Sup So, Victor O. Adetimirin, Soon-Kwon Kim
Plant Breed. Biotech. 2013;1(2):171-177.   Published online June 30, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.2.171

On August 2, 1999, the typhoon “Olga” with the maximum wind speed of 19.2 m/s hit the Korean peninsula and caused considerable damage to crops. Regional yield trials were at tasseling stage and were affected by the typhoon. After the storm, almost all the plants were root-lodged. This provided a rare chance to study the relationship between recovery from the lodging and reduction of grain yield in maize. Three check cultivars were examined for angle of lodging, grain yield, yield components, plant height and ear height. Six levels of leaning were classified. Plants leaning less than 10° from the vertical were considered as non-lodged. Average reduction in grain yield across five levels of lodging was 29.2% with the mean of 46.1°. The reductions of three hybrids were 25% for Suwon 19, 39.5% for Pioneer 3525 and 27.4% for DeKalb 689. R2 values of grain yield on angles of lodging ranged from 0.33 for Suwon 19 to 0.51 for Pioneer 3525. The slope of the regression was lowest for Suwon 19 and highest for Pioneer 3525. Yield reduction from lodging was less severe for the locally bred Suwon 19. Reductions in yield components were also influenced by cultivars with Pioneer 3525 showing the most severe reduction. The yield components most severely affected by root lodging at the flowering time were ear length and number of kernels per row. The high reductions in yield and agronomic traits caused by root lodging justify the lodging resistance as a major breeding
objective
in Korea.

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    A. J. Lindsey, B. Allred, L. R. Martinez, Greg Rouse, P. R. Thomison
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    Jiyong Peng, Liang Lu, Mehmood Ali Noor, Shuyan Li, Wei Ma, Jing Wang
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    Alexander J. Lindsey, Allen B. Geyer, Rich Minyo, Peter R. Thomison
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    Alexander J. Lindsey, Paul R. Carter, Peter R. Thomison
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  • Wide–Narrow Row Planting Pattern Increases Root Lodging Resistance by Adjusting Root Architecture and Root Physiological Activity in Maize (Zea mays L.) in Northeast China
    Shengqun Liu, Shulian Jian, Xiangnan Li, Yang Wang
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    Plant Production Science.2020; 23(3): 286.     CrossRef
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