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"Genotype"

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"Genotype"

Research Articles
Genetic Purity Analysis Using Polymorphic SSR Markers in Rice Genotypes (Oryza sativa L.) and Their Confirmation for the Parental Lines
Afifuddin Latif Adiredjo, Noer Rahmi Ardiarini, Damanhuri
Plant Breed. Biotech. 2023;11(3):220-224.   Published online September 1, 2023
DOI: https://doi.org/10.9787/PBB.2023.11.3.220

The purity of seeds can be identified from the traits inherited from their parental lines. Hence, contamination may occur at the crossing step due to unshared similarities with their parents. This research aims to measure the genetic purity of several genotypes obtained from crosses between upland and lowland rice through the banding pattern differences among the genotype samples by using Simple Sequence Repeats (SSR) markers. Taking the leaf samples was carried out at the experimental field, while the marker analysis was conducted in the Plant Biotechnology Laboratory. In this research, 8 (eight) genotypes obtained from crossing, comprising F1, F2, and BC1 along with 4 (four) of their parents from upland rice and lowland rice, were tested using 6 (six) drought-specific SSR primers of RM5, RM211, RM232, RM249, RM255, and RM258. The banding pattern of the electrophoresis results on the 12 rice genotypes showed clear, unsmeared quality. Based on the results of distance and genetic similarities, the 12 genotypes could be classified into 4 (four) clusters in the dendrogram. Cluster I consists of the Situ Bagendit and BC1 TWCH varieties, Cluster II the Towuti variety, Cluster III the Ciherang, Cibogo, F1 SBCH, F1 SBCB, and F1 TWCH varieties, and Cluster IV the F2 SBCH, F2 TWCH, F2 SBCB, and BC1 SBCH varieties.

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  • Introgressing photoperiod/thermo-sensitive genic male sterile gene into Basmati 370 rice
    Beatrice Nyarangi Nyankemba, Edith Esther Arunga, Paul Njiruh Nthakanio
    Journal of Experimental Biology and Agricultural Sciences.2024; 12(5): 756.     CrossRef
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Physiological and Biochemical Responses of Diverse Peanut Genotypes under Drought Stress and Recovery at the Seedling Stage
Rizwana Begum Syed Nabi, Myoung Hee Lee, Sungup Kim, Jung-In Kim, Min Young Kim, Kwang Soo Cho, Eunyoung Oh
Plant Breed. Biotech. 2022;10(1):15-30.   Published online March 28, 2022
DOI: https://doi.org/10.9787/PBB.2022.10.1.15

Peanut (Arachis hypogaea L.) is an important oilseed, cash crop grown worldwide mainly in a tropical and subtropical climate. Drought stress (DS) is one of the serious abiotic stresses that alter the morphological, physiological, biochemical and molecular responses of plants and causes huge production loss across the globe. The aim of this study, to investigate the twenty widely grown Korean genotypes at the seedling stage under the control and drought stress conditions, to identify tolerant lines as well as related traits. In addition, the influence of DS and rehydration or recovery after stress on peanut genotypes was also studied. Initial screening showed that given genotypes had a differential response to DS, demonstrating a wide range of variation in tested peanut genotypes during the seedling stage towards the DS. Further, based on investigation of the different growth attributes and biochemical assessment six genotypes (Palkwang, Milkwang, and Daekwang) and (Daekwang, Haeol, and Heukhwaseang) were observed as drought-tolerant and drought-sensitive lines respectively. The findings of this study will aid in the selection of peanut genotypes in future breeding efforts aimed at improving drought tolerance and minimizing peanut production loss.

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  • Mitigating the negative impact of irrigation water deficit in oat (Avena sativa L.) with glutamic acid foliar application
    M. M. Tawfik, Gehan A. Amin, Mervat S. Sadak, Gehan Sh. Bakhoum
    Vegetos.2026; 39(2): 534.     CrossRef
  • Within-plant variability in pod maturity and preharvest sprouting in peanut (Arachis hypogaea L.): Physiological drivers, agronomic impacts, and integrated mitigation strategies
    Yohannes Gelaye, Huaiyong Luo
    Oil Crop Science.2026; 11(1): 92.     CrossRef
  • State-of-the-art AI-enabled mobile device for real-time water stress detection of field crops
    Narendra Singh Chandel, Subir Kumar Chakraborty, Abhilash K. Chandel, Kumkum Dubey, Subeesh A, Dilip Jat, Yogesh A. Rajwade
    Engineering Applications of Artificial Intelligence.2024; 131: 107863.     CrossRef
  • Optimizing Peanut (Arachis hypogaea L.) Production: Genetic Insights, Climate Adaptation, and Efficient Management Practices: Systematic Review
    Yohannes Gelaye, Huaiyong Luo
    Plants.2024; 13(21): 2988.     CrossRef
  • Phenotyping Peanut Drought Stress with Aerial Remote-Sensing and Crop Index Data
    Maria Balota, Sayantan Sarkar, Rebecca S. Bennett, Mark D. Burow
    Agriculture.2024; 14(4): 565.     CrossRef
  • Induction of Tolerance in Groundnut Plants Against Drought Stress and Cercospora Leaf Spot Disease with Exogenous Application of Arginine and Sodium Nitroprusside Under Field Conditions
    Gehan Sh. Bakhoum, Mervat Sh. Sadak, Marian S. Thabet
    Journal of Soil Science and Plant Nutrition.2023; 23(4): 6612.     CrossRef
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Genetic Diversity Analysis and Molecular Screening for Salinity Tolerance in Wheat Germplasm
Muhammad Abdul Hannan, Nihar Ranjan Saha, Swapan Kumar Roy, Sun-Hee Woo, Muhammad Shahidul Haque
Plant Breed. Biotech. 2021;9(3):185-198.   Published online September 1, 2021
DOI: https://doi.org/10.9787/PBB.2021.9.3.185

Salinity is the most significant constraint to wheat cultivation in the salinity-affected areas. Saline-prone soils can be brought under cultivation by the development of salt-tolerant lines through molecular breeding aided by diversity analysis and molecular screening. The study aimed to screen for salinity tolerance and elucidate the extent of diversity among 75 wheat varieties and accessions. This molecular analysis and detection used 21 linked SSR markers. The study identified 202 alleles in 75 genotypes of wheat, giving 9.6 alleles on an average for salt tolerance screening. The mean polymorphism information content (PIC) of 0.7599 and the Nei’s (1973) gene diversity of 0.7856 were recorded. The accessions possess higher gene diversity and PIC than the cultivars. The average genetic similarity matrix coefficient was 0.60 within the range of 0.19 and 1.00. Similarity indices based UPGMA cluster analysis separated the 75 germplasm into six clusters. Eight genotypes grouped in sub-cluster Ib together with the positive control BINA Gom-1. Therefore, these eight genotypes were identified as potential salt-tolerant by molecular analysis using SSR markers linked to salinity. The gene diversity estimated, and the germplasm identified as potential salt-tolerant are promising for use in wheat breeding to incorporate salt tolerance in novel cultivars by marker-assisted breeding.

Citations

Citations to this article as recorded by  
  • Correlation of Root System Architecture at Early Seedling Stage and Coleoptile Length and Grain Properties of Korean Wheat Cultivars
    Kyeong-Min Kim, Sumin Hong, Myung-Goo Choi, Changhyun Choi, Myoung Hui Lee, Mira Yoon, Chon-Sik Kang, Ki-Chang Jang, Youngjun Mo, Chul Soo Park
    Korean Journal of Breeding Science.2024; 56(2): 113.     CrossRef
  • Evaluation of Cold Resistance at Seedling Stage for 70 Peanut Genotypes Based on Photosynthetic Fluorescence Characteristics
    Linmei Ye, Tao Wang, Renye Wu, Conghui Zheng, Liuqi Zhan, Jianhong Chen, Shengyao Guo, Yongkuai Chen
    Agronomy.2024; 14(8): 1699.     CrossRef
  • Microsatellite marker-based genetic diversity assessment among exotic and native maize inbred lines of Bangladesh
    Md. Amraul Islam, Md. Shahidul Alam, Md. Maniruzzaman, Muhammad Shahidul Haque
    Saudi Journal of Biological Sciences.2023; 30(8): 103715.     CrossRef
  • Research Advances in Diversity of Wheat Genetic Resources
    Do Yoon Hyun, Jae Yoon Kim
    Korean Journal of Breeding Science.2023; 55(4): 350.     CrossRef
  • Screening of salt-tolerant wheat (Triticum aestivum L.) through morphological and molecular markers
    Md. Hasanuzzaman, Nihar Ranjan Saha, Sayma Farabi, Md. Tahjib-Ul-Arif, Sabina Yasmin, Muhammad Shahidul Haque
    Cereal Research Communications.2023; 51(1): 87.     CrossRef
  • Effects of Exogenous Calcium on Adaptive Growth, Photosynthesis, Ion Homeostasis and Phenolics of Gleditsia sinensis Lam. Plants under Salt Stress
    Yun Guo, Yang Liu, Yan Zhang, Jia Liu, Zarmina Gul, Xiao-Rui Guo, Ann Abozeid, Zhong-Hua Tang
    Agriculture.2021; 11(10): 978.     CrossRef
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Adaptation of Hybrid Maize to Greenbelt and Ironstone Plateau Agro-Ecologies of South Sudan
Luka A.O. Awata, Susan A. Tokwiny, Innocent Kitara, Richard O. Zozimo, Victor S. Bennet, Cirino O. Oyiki
Plant Breed. Biotech. 2021;9(2):124-138.   Published online June 1, 2021
DOI: https://doi.org/10.9787/PBB.2021.9.2.124

Maize is a major staple food and source of income for over 90% of the population in South Sudan however, average yield is very low (0.5-0.9 t/ha). Little research has been done on maize improvement in the country and farmers mainly depend on local and unimproved cultivars. Identification and release of adapted and high yielding hybrids may elevate average maize yield (t/ha) among the resource-poor farmers in the country. Improved maize hybrids from the region have not been tested under South Sudanese environments.
Objective
s of the study were to: (i) determine genotype by environment interactions among some regional maize genotypes; (ii) estimate genetic components and heritability for yield performances; and (iii) identify high yielding maize hybrids adapted to agroecologies of South Sudan. At least 48 maize genotypes including elite hybrids and open-pollinated varieties (OPV) adapted across sub-Saharan Africa and two local cultivars collected from local farmers in South Sudan were evaluated across five locations within greenbelt and ironstone plateau agro-ecologies over three years (2013-2015). Experiments were set up in a 12 × 4 alpha lattice design with 2 replications. Standard agronomic practices were followed and data recorded on yield traits and resistance to major diseases. Across locations and years analysis revealed significant differences among genotypes due to genotype and genotype × environment interactions (P ≤ 0.01). Significant variability (P ≤ 0.01) existed among the genotypes for yield stability across environments. The study identified hybrids SC719 (8.3 t/ha), KH500-22A (8.0 t/ha) and Longe 10H (7.9 t/ha) as the best and stable candidates.

Citations

Citations to this article as recorded by  
  • Climate adaptation and livelihood strategies in the Madurese community of Sumenep, Indonesia
    Agus Danugroho, Rustinsyah Rustinsyah, Muhammad Adib, Usman Idris
    Development in Practice.2026; 36(2): 209.     CrossRef
  • New okra genotypes for the management of aphids (Hemiptera: Aphididae) in the diverse ecological landscapes of Central Africa
    Albert Fomumbod Abang, Srinivasan Ramasamy, Rachid Hanna, Sevillor Kekeunou, Apollin Fotso Kuate, Abdou Tenkouano, Komi Kouma Mokpokpo Fiaboe, Charles-Félix Bilong Bilong, Louis Hesler
    Journal of Economic Entomology.2024; 117(5): 2123.     CrossRef
  • Genetic Diversity and Population Structure of Normal Maize Germplasm Collected in South Sudan Revealed by SSR Markers
    Emmanuel Andrea Mathiang, Kyu Jin Sa, Hyeon Park, Yeon Joon Kim, Ju Kyong Lee
    Plants.2022; 11(20): 2787.     CrossRef
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Estimating Pedigree-Based Breeding Values and Stability Parameters of Elite Rice Breeding Lines for Yield under Salt Stress during the Boro Season in Bangladesh
M. Ruhul Quddus, M. Akhlasur Rahman, Nusrat Jahan, Sanjoy K. Debsharma, Ribed F. Disha, M. Moniruzzaman Hasan, Tamal L. Aditya, KM Iftekharuddaula, Bertrand C.Y. Collard
Plant Breed. Biotech. 2019;7(3):257-271.   Published online September 1, 2019
DOI: https://doi.org/10.9787/PBB.2019.7.3.257

In salinity affected areas, variation in salinity level is the major cause of yield fluctuations in rice during the dry season (boro season). To sustain food security in Bangladesh, plant breeders need to develop new rice varieties which are higher yielding, salinity tolerant and stable across different environments. We evaluated the yield performance and stability of 51 rice elite genotypes including two salinity tolerant rice varieties (BRRI dhan67 and BINA dhan-10) and the dominant boro rice variety (BRRI dhan28) in three locations, including a salinity “hotspot”. Best linear unbiased predictions (BLUPs) were used to identify superior genotypes from multi-environment trials. Selection from a large set of candidates is required for evaluation and recommending a new variety for release. Estimated breeding values (EBVs) were used to select parents. Six parents with high EBVs (BR8982-5, IR 87870-6-1-1-1-1-B; BR8943-B-1-2-7, BR8940-B-17-4-7, A69-1 and BR8943-B-5-5-14) would be useful as parents to develop new breeding populations. To evaluate yield performance and stability across environments, we used additive main effects and multiplicative interaction (AMMI) model using a randomized complete block design with two replications. Genotype × environmental analysis was performed using GGE biplot analysis. Based on yield performance and stability, BR8982-5, IR 87870-6-1-1-1-1-B, BR8943-B-1-2-7, BR8940-B-17-4-7, A69-1 and BR8943-B-5-5-14 were promising across the tested environments, as they showed yield advantages over check varieties. The results in this study will be useful for selecting the elite lines suitable for salinity affected areas and parents for rapid breeding of salinity tolerance.

Citations

Citations to this article as recorded by  
  • Identification of elite rice lines with better breeding values using genomic prediction and multi-trait genotype ideotype distance index (MGIDI) for grain yield under irrigation cropping system
    S. S. Chaity, M. R. Islam, M. Faruquee, J. U. Ahmed, A. K. M. Aminul Islam, C Anilkumar
    PLOS One.2026; 21(2): e0340188.     CrossRef
  • Mean deviation is reliable parameter for evaluating inbred-line yield potential in hybrid breeding
    Y.D. Zhang, H.M. Chen, Z.W. Li, W.H. Yao, F.Y. Jiang, T.Z. Wang, I. Babar, C.X. Xu
    Journal of Crop Improvement.2026; 40(3): 320.     CrossRef
  • Identification of High-Performing and Stable Pearl Millet Genotypes Using Multi-trait Stability Index
    Tripti Singhal, C. Tara Satyavathi, S. P. Singh, Mukesh Sankar, Sunaina Yadav, M. Mallik, C. Bharadwaj
    Agricultural Research.2026; 15(1): 92.     CrossRef
  • AMMI analysis of elite bread wheat (Triticum aestivum L.) selections for genotype by environment interaction and stability of grain yield in Southern Ethiopia
    Liyew Alemayehu, Mesfin Kebede, Eyasu Wada, Mehdi Rahimi
    PLOS ONE.2025; 20(1): e0318559.     CrossRef
  • Multivariate analysis for identifying high-yielding rice cultivars based on seed yield and morphological traits
    Md. Asadulla Al Galib, Sumaiya Farzana, Tusher Chakrobarty, Mohammad Zahidul Islam, Bir Jahangir Shirazy, Md. Akhlasur Rahman, Shahin Imran, Md. Tahjib-Ul-Arif, Mohammad Saidur Rhaman
    Discover Plants.2025;[Epub]     CrossRef
  • Cultivating sustainable futures: multi-environment evaluation and seed yield stability of faba bean (Vicia faba L.) genotypes by using different stability parameters in Ethiopia
    Demekech Wondaferew, Destaw Mullualem, Walelgn Bitewlgn, Zelalem Kassa, Yekoye Abebaw, Habib Ali, Kelelaw Kebede, Tessema Astatkie
    BMC Plant Biology.2024;[Epub]     CrossRef
  • Identification and evaluation of high-performing advanced germplasm of rice through morphological and breeding value analysis
    Md. Ariful Islam, Md. Moniruzzaman Hasan, Mohammad Anwar Hossain, Md. Ashraful Haque, Md. Nur Alam Siddique, Md. Shamsuddoha, Muhammad Ashraful Habib, Sumaiya Sultana Risha
    Discover Agriculture.2024;[Epub]     CrossRef
  • Bunch component performance of AVROS and Yangambi population
    A N Simamora, H Y Rahmadi, Y Yenni, Sujadi, H A Siregar, N Supena, M Arif, E Supriyanto, A R Purba
    IOP Conference Series: Earth and Environmental Science.2024; 1308(1): 012017.     CrossRef
  • Developing climate-resilient rice varieties (BRRI dhan97 and BRRI dhan99) suitable for salt-stress environments in Bangladesh
    Sanjoy K. Debsharma, M. Akhlasur Rahman, Mahmuda Khatun, Ribed F. Disha, Nusrat Jahan, Md. Ruhul Quddus, Hasina Khatun, Sharifa S. Dipti, Md. Ibrahim, K. M. Iftekharuddaula, Md. Shahjahan Kabir, Md Ashrafuzzaman
    PLOS ONE.2024; 19(1): e0294573.     CrossRef
  • Genotype-by-environment interaction and stability analysis of grain yield of bread wheat (Triticum aestivum L.) genotypes using AMMI and GGE biplot analyses
    Destaw Mullualem, Alemu Tsega, Tesfaye Mengie, Desalew Fentie, Zelalem Kassa, Amare Fassil, Demekech Wondaferew, Temesgen Assefa Gelaw, Tessema Astatkie
    Heliyon.2024; 10(12): e32918.     CrossRef
  • Comparative analysis of parametric and non-parametric statistics for grain yield stability in rice (Oryza sativa L.)
    Hari Kesh, Khushi Ram Battan, Mujahid Khan
    Vegetos.2024; 38(2): 686.     CrossRef
  • B × R cross de rived parental line development using breeding value: A new model for hybrid rice parental line development
    Md. Ruhul Quddus, Md. Jamil Hasan, Mst. Umma Kulsum, Satyen Mondal
    Plant Gene.2023; 36: 100431.     CrossRef
  • SNP Based Trait Characterization Detects Genetically Important and Stable Multiple Stress Tolerance Rice Genotypes in Salt-Stress Environments
    Sanjoy K. Debsharma, Mohammad Akhlasur Rahman, Mohammad Ruhul Quddus, Hasina Khatun, Ribed F. Disha, Popy R. Roy, Sharif Ahmed, Mohamed El-Sharnouby, Khandakar Md. Iftekharuddaula, Salman Aloufi, Fahad M. Alzuaibr, Mohammed Alqurashi, Mohamed I. Sakran, M
    Plants.2022; 11(9): 1150.     CrossRef
  • Harnessing on Genetic Variability and Diversity of Rice (Oryza sativa L.) Genotypes Based on Quantitative and Qualitative Traits for Desirable Crossing Materials
    Sanjoy K. Debsharma, Md. Abu Syed, Md. Hannan Ali, Sheikh Maniruzzaman, Popy R. Roy, Marian Brestic, Ahmed Gaber, Akbar Hossain
    Genes.2022; 14(1): 10.     CrossRef
  • Evaluating Genotype × Environment Interactions of Yield Traits and Adaptability in Rice Cultivars Grown under Temperate, Subtropical and Tropical Environments
    Xing Huang, Su Jang, Backki Kim, Zhongze Piao, Edilberto Redona, Hee-Jong Koh
    Agriculture.2021; 11(6): 558.     CrossRef
  • Estimating Breeding Value of Agronomic Traits in Oriental Tobacco Genotypes under Broomrape Stress and Normal Conditions
    Maryam Tahmasbali, Reza Darvishzadeh, Amir Fayaz Moghaddam
    Plant Genetic Researches.2020; 7(1): 103.     CrossRef
  • Application of Pedimap: a pedigree visualization tool to facilitate the decisioning of rice breeding in Sri Lanka
    Rasika Rathnayake, Shehan Sahibdeen, Kapila Udawela, Cholani Weebadde, Wijayasiri Weerakoon, Suneth Sooriyapathirana
    Scientific Reports.2020;[Epub]     CrossRef
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Genotype by Planting Date Effects on Cowpea in Humid Fringes, Southeast Nigeria
Godson Emeka Nwofia, Chinenye Rozzy Onyekwere, Emmanuel Ukaobasi Mbah
Plant Breed. Biotech. 2018;6(2):95-108.   Published online June 1, 2018
DOI: https://doi.org/10.9787/PBB.2018.6.2.95

A two-year factorial arranged field experiment in randomized complete block design with three replications was carried out in 2014 and 2015 at Michael Okpara University of Agriculture Teaching and Research Farm, Umudike (latitude 05° 29′N; longitude 07° 33′E; altitude 122 m above sea level), Nigeria. The
objective
s were to assess growth and yield response of twenty newly released cowpea genotypes to different planting dates (July, August and September). Plant height, number of leaves/plant, number of branches/plant, shoot biomass, total dry matter, number of nodules/plant, weight of pod, number of seeds/pod, seed weight/pod and grain yield varied amongst the genotypes and across the different planting dates in both years. The association between grain yield and other variables analysed across both years was significant and positive except 100-seed weight and the phenological characters of the plant. Path coefficients analysis across two years indicated that seed weight/pod followed by number of branches/plant and number of seeds/pod had positive direct effect on grain yield of cowpea in contrast to characters that exhibited negative but direct effect on yield. The other traits had relatively negligible to low indirect effects that were positive through other component traits. The grain yield sequence of interaction between genotype and date of planting was in this order: IT06K-141 planted in July > IT11K-61-82 planted in September > IT99K-573-1-1 planted in August. IT06K-141 genotype was considered to be better endowed genetically while the mean across both years indicated August as appropriate planting date to ensure high and sustainable grain yield.

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Parentage Confirmation of Korean Bred Pear Cultivars by Simple Sequence Repeat SSR Genotyping and S-Genotypes Analysis
Hoy-Taek Kim, Arif Hasan Khan Robin, Ill-Sup Nou
Plant Breed. Biotech. 2016;4(2):198-211.   Published online May 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.2.198

Identification and authentication of parentage are important for effective pear breeding. Within Korean pear cultivars discrepancies are often reported between parents and offspring in skin color of fruits and also in S-genotypes suggesting that reported parentage was often inappropriate. In Korea, the parentage of the most of pear cultivars was never confirmed at the molecular level. Simple sequence repeat (SSR) genotyping and S-genotype analysis are considered effective in identifying parents. In this study, parentage of nine Korean bred cultivars was confirmed using SSR genotyping and S-genotype analysis. A total of 53 SSR markers were used. Six different haplotype-specific endonucleases were used for restriction cleavage of S-genotypes. Most of the Korean bred cultivars had six comparatively shorter S-RNase, S1, S3, S4, S5, S6, or S7 of 450 bp in length whereas the Japanese control cultivars had four other comparatively longer S-RNase. Out of nine pear cultivars only ‘Chuwhangbae’ and ‘Whangkeumbae’ had identical SSR genotypes and S-genotype with previously reported parents. For another cultivar, ‘Sujeonbae’, the parents were the mutants of reported parent, ‘Niitaka’. For four other cultivars, SSR and S-genotypes of offspring matched with only one reported parent ‘Niitaka’ but those of another parent did not match. For the two other pear cultivars ‘Soowhangbae’ and ‘Sooyoung’ none of reported parents were confirmed by SSR genotyping and S-genotype analysis. Historically, the parent ‘Niitaka’ was predominant in the Korean pear breeding programs because of its high yield potential and quality. The methods have been used in this study could be used to identify pear cultivars with diverse S-genotypes to eliminate any existing obscure parent-offspring relations.

Citations

Citations to this article as recorded by  
  • Genetic Differentiation of Ornamental and Fruit-Bearing Prunus laurocerasus Revealed by SSR and S-Locus Markers
    Attila Hegedűs, Péter Honfi, Sezai Ercisli, Gulce Ilhan, Endre György Tóth, Júlia Halász
    Horticulturae.2025; 11(7): 854.     CrossRef
  • Quantitative Trait Loci Analysis Related to Fruit Quality Traits in Interspecific Hybrid Derived from the Cross Between ‘Manpungbae’ and ‘Oharabeni’ Pear (Pyrus spp.)
    Keumsun Kim, Haewon Jung, Kyungho Won, Seok Kyu Yun, Young Sik Cho, Eu Ddeum Choi, Ung Yang
    Korean Journal of Breeding Science.2025; 57(4): 455.     CrossRef
  • Construction of a Bin Genetic Map and QTL Mapping of Red Skin in Interspecific Pear Population
    Xiaojie Zhang, Mengyue Tang, Jianying Peng, Hui Ma, Yuxing Zhang
    Horticulturae.2025; 11(8): 994.     CrossRef
  • Phenotypic assessment of pear varieties in mutual pollination
    Nina Mozhar, E. Egorov, I. Ilina, N. Zaporozhets, E. Yakimenko
    BIO Web of Conferences.2021; 34: 01012.     CrossRef
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Phenotypic Stability Analysis of Yield Components in Cashew (Anacardium occidentale L.) Using Additive Main Effect and Multiplicative Interaction (AMMI) and GGE Biplot Analyses
Olawale M. Aliyu, Oluwatosin O. Adeigbe, Oluwafemi O. Lawal
Plant Breed. Biotech. 2014;2(4):354-369.   Published online December 31, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.4.354

Perennial poor fruit-set and variability in tree yield are among major problems of cashew nut production. Thus, development of improved stable genotypes would be a sustainable strategy to address this perpetual problem in order to boost income and livelihood of many smallholder farmers of this important commodity crop. Here, we have applied additive main effect and multiplicative interaction (AMMI) and genotype, genotype by environment (GGE) biplot analysis to a 3-year multi-locational trial data on nine yield component characters of cashew to evaluate phenotypic stability across diverse environments. Variance analysis showed significant variability in the cashew genotypes and strong influence of genotype by environment (GxE) on tree yield as none of the genotypes was stable for any of the yield components across locations. GxE data showed that a substantial portion of the variation was explained by the genotype (highly heritable), accounting for between 10% and 87% of the variation, while the environment accounted for between 0.7% and 37%. Data showed significant higher values of interaction (GxE) than the respective values for environment, and were mostly captured and could be explained by the first principal component axis (IPCA 1) for all the yield component characters. There was an inverse relationship between stability and yield as the best three yielding genotypes (KT_26, IW_222 and IW_31) were found to be the most unstable. Among the yield component tested, hermaphrodite flowers per panicle, nuts per panicle, nuts per tree, nut weight, and tree fruiting efficiency were identified to be critical components for nut yield. Although there was wide variation between the three environments evaluated, the data effectively identified two mega-environments (ME), and two superior genotypes (IW_222 and KT_26) suitable for these two mega-environments. The GxE complex exposes the short-comings of broad recommendations of common agronomic-husbandry technologies across diverse cashew ecologies as each mega-environment would require specific adaptable technologies for optimal plant output. Above all, the data presented here underscore the importance of multi-locational evaluation of genotypes for varietal development in cashew.

Citations

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  • Growth and yield response of cashew (Anacardium occidentale L.) clones to spacing in the Guinea Savanna zone of Ghana
    Sampson Konlan, Michael Teye Barnor, Alfred Arthur, Jerome Agbesi Dogbatse, Jacob Danso, Godfred Kwaku Awudzi, Moses Kwame Aidoo, Frank Owusu‐Ansah
    Agrosystems, Geosciences & Environment.2026;[Epub]     CrossRef
  • Identification of superior dwarf cashew clones by graphic analysis in Pacajus, Ceará, Brazil
    Gilberto Ken Yokomizo, Dheyne Silva Melo, Kuang Hongyu, Luiz Augusto Lopes Serrano, Francisco da Chagas Vidal-Neto
    Acta Biológica Colombiana.2026; 31(1): 90.     CrossRef
  • Efeitos dos meses no comportamento de progênies de açaizeiro para caracteres de cacho de frutos
    Gilberto Ken Iti Yokomizo, Kuang Hongyu, João Tomé de Farias Neto, Francisco de Oliveira Cruz Júnior
    PesquisAgro.2025; 9(1): 15.     CrossRef
  • Analysis of stability for nut yield and ancillary traits in cashew (Anacardium occidentale L.)
    E. Eradasappa, G. S. Mohana, M. Poduval, K. Sethi, M. S. Aneesa Rani, I. K. Lourdusamy, S. Velmurugan, M. Manjusha, T. N. Raviprasad, C. Anilkumar
    Scientific Reports.2024;[Epub]     CrossRef
  • Assessment of adaptability of cashew varieties to changing environmental conditions of Odisha
    Kabita Sethi, Manasi Dash, P.K. Panda, Mohana G.S., J. Dinakara Adiga
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