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"Jae Il Lyu"

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"Jae Il Lyu"

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Developing DNA Markers based on Male-Specific Chromosomal Regions for Selecting Male Plants in Hop (Humulus lupulus)
Tae hyun Ha, Jae Il Lyu, So Young Yi, Si-Yong Kang
Plant Breed. Biotech. 2024;12:10-16.   Published online March 14, 2024
DOI: https://doi.org/10.9787/PBB.2024.12.10

Hops are dioecious, with only female plants cultivated for resin production and primarily used in brewing. Therefore, early sex identification at the seedling stage is crucial for breeding and cultivation. Molecular marker-assisted selection facilitates rapid and reliable sex identification of hops. We developed molecular male markers by leveraging sequence information from male-specific regions in a designated public database. To assess the accuracy of sex identification using the newly generated markers, we performed PCR analysis on four cultivars of hops with known sexes. Seventy-eight percent of the tested PCR primers correlated with the male sex phenotype. Following optimization, four primer pairs were successfully converted into male-specific PCR markers.

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Research Articles
Comparative Analysis of Gene Expression Related to Salt Tolerance with Sorghum (Sorghum bicolor L. Moench) Mutants
Ji Su Seo, Jae Il Lyu, Jung Min Kim, Nguyen Ngoc Hung, Joon-Woo Ahn, Chang Soo Kim, Bo-Keun Ha, Soon-Jae Kwon
Plant Breed. Biotech. 2022;10(2):128-138.   Published online June 1, 2022
DOI: https://doi.org/10.9787/PBB.2022.10.2.128

Sorghum is the fifth most important grain crop worldwide. It is not only used as food and feed, but also as a resource for biofuel production. In addition, it has potential uses as a model plant for research on adaptation to environmental stress. In this study, mutant sorghum lines were generated by gammy ray irradiation. Ten of the M6 sorghum mutant lines were selected from 28 mutant lines on the basis of agronomic characteristics. These 10 lines, along with their original accessions/cultivar, were evaluated to determine the germination rate and the shoot and root length under salt treatment. Compared with their original accessions, three mutant lines (B5, SY6, and SY7) showed significant differentiation under saline conditions (150 mM NaCl), with increased shoot length (by 1.3-2.2 times) and root length (by 1.5-2.5 times). We determined the transcript levels of 20 abiotic stress-responsive genes in B5 (the most salt-tolerant mutant) and its original accession. These genes included those encoding heat shock proteins, aquaporins, ROS scavenging system, and transcription factors. In the B5 mutant, 15 genes showed differences in transcript levels between the control and the salt treatment. Salt treatment resulted in significant up-regulation of Sb03g045840 and down-regulation of Sb3g030750 in the B5 mutant. Here, we reported a simple method to identify genes related to salt tolerance in a sorghum mutant.

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  • Alteration of gene expression profiles in the mutant line of Sorghum bicolor
    Sehyun Choi, Ji-Su Seo, Joon-Woo Ahn, Soon-Jae Kwon, Donghyun Jeon, Changsoo Kim
    Journal of Crop Science and Biotechnology.2023; 26(5): 537.     CrossRef
  • Deciphering the Genetic Mechanisms of Salt Tolerance in Sorghum bicolor L.: Key Genes and SNP Associations from Comparative Transcriptomic Analyses
    Donghyun Jeon, Jin-Baek Kim, Beum-Chang Kang, Changsoo Kim
    Plants.2023; 12(14): 2639.     CrossRef
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Phenolic Compound Content of Leaf Extracts from Different Roselle (Hibiscus sabdariffa) Accessions
Jae Il Lyu, Jung Min Kim, Dong-Gun Kim, Jin-Baek Kim, Sang Hoon Kim, Joon-Woo Ahn, Si-Yong Kang, Jaihyunk Ryu, Soon-Jae Kwon
Plant Breed. Biotech. 2020;8(1):1-10.   Published online March 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.1.1

The leaves of roselle (Hibiscus sabdariffa L.) have been used as a traditional folk medicine that has diuretic and mild laxative effects. Roselle is cultivated in many countries for medicines and food. However, studies on the variation of functional compounds in different accessions are relatively limited. In this study, we investigated the phenolic compound content of leaf extracts from 49 different roselle accessions from a worldwide collection by ultra-high performance liquid chromatography mass spectrometry. The aim was to chemically classify and assess the pharmacological properties of the phenolic compounds in the leaves. The phenolic compounds were identified as neochlorogenic acid, cryptochlorogenic acid, rutin, rutin isomer, isoquercitin, kaempferol-3-O-rutinoside, kaempferol-3-O-glucoside, quercetin, quercetin isomer, and kaempferol. These compounds were present at significantly different levels among the accessions. The most abundant phenolic compound was rutin, which was found in 45 accessions where the total phenolic compound content was 18.75-46.51 mg/g (average 31.52 mg/g). The phenolic compounds were classified into four groups. The two accessions with the highest total phenolic compound content were from Ghana (PI286316) and Senegal (PI275413). The hierarchical cluster analysis of the 49 roselle accessions showed that they formed five groups according to their phenolic compound content. Our results will be useful for the selection of roselle genotypes with improved functional compounds.

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  • Metabolomic Profiling of Taiwanese Roselle (Hibiscus sabdariffa) Leaves and Their Antiproliferative and Insulin Resistance-Ameliorating Potential
    Yu-Hung Liao, Jing-Wen Chen, Yu-Chia Chang, San-Chi Chang, Chun-Han Su
    Foods.2026; 15(10): 1696.     CrossRef
  • Optimisation of the Extraction Process and Quality Attributes of a Roselle (Hibiscus sabdariffa L.) Leaf Tisane Beverage
    Izalin Zahari, Norra Ismail, Muhammad Shafiq Johari, Norhartini Abdul Samad
    Processes.2026; 14(2): 318.     CrossRef
  • Applicability of Hibiscus sabdariffa L. Extract With Anti‐Inflammatory Potential in Human Health: A Review
    Anne Caroline Silva Nogueira da Cruz, Michelline Joana Tenório Albuquerque Madruga Mesquita, Guilherme kauan Rocha Dantas, Eduardo Rodrigues Silva, Victória Carvalho Falcone De Oliveira, Heitor Martins Rezende, Gustavo Medeiros Frota, Mariana Cavalcante,
    Food Science & Nutrition.2025;[Epub]     CrossRef
  • Enhancement of physicochemical, microbiological, and sensory properties of oil cake fortified with wheat bran, α-amylase microcapsules, and Roselle extract nano-emulsions during storage
    Golnaz Soltani, Alireza Rahman, Lida Shahsavani Mojarad, Touraj Rahimi
    LWT.2025; 218: 117491.     CrossRef
  • Bioprocess strategies for maximizing SCOBY growth and evaluating fermentation dynamics on phenolic content and antioxidant activity in Roselle-based Kombucha
    Widiastuti Setyaningsih, Wa Ode Reza Sindy Warni, Intan Dewi Larasati, Rini Yanti, Tyas Utami
    Phytomedicine Plus.2025; 5(2): 100791.     CrossRef
  • Hibiscus sabdariffa L. (Roselle flower) extract exerts protective effects against lipopolysaccharide-induced inflammation by ameliorating TLR4/NF-κB and NLRP3 inflammasome activation
    Narongsuk Munkong, Atcharaporn Ontawong, Natthaphon Thatsanasuwan, Sirinat Pengnet, Jiradej Makjaroen, Phorutai Pearngam, Saharat Nanthawong, Poorichaya Somparn, Natnisha Leelahavanichkul, Arthid Thim-uam
    Inflammopharmacology.2025; 33(7): 4077.     CrossRef
  • Optimization of Ultrasound-Assisted Cold-Brew Method for Developing Roselle (Hibiscus sabdariffa L.)-Based Tisane with High Antioxidant Activity
    Intan Dewi Larasati, Nurul Mutmainah Diah Oktaviani, Hanifah Nuryani Lioe, Teti Estiasih, Miguel Palma, Widiastuti Setyaningsih
    Beverages.2023; 9(3): 58.     CrossRef
  • Heating effect on nutritional value from two morphotypes (palmate and semi-palmate leaves) of Hibiscus sabdariffa
    Antoine Sambou, Nicolas Ayessou, Aly Diallo
    International Journal of Gastronomy and Food Science.2023; 32: 100698.     CrossRef
  • Chemical constituents fromHibiscus hamaboand their antiphotoaging effects onUVA‐inducedCCD‐986sk
    Gwee Kyo Park, Wookju Jang, Bo Yun Kim, Kyung‐Eon Oh, You Ah. Kim, Hyuk Joon Kwon, Soo‐Young Kim, Byoung Jun Park
    Bulletin of the Korean Chemical Society.2022; 43(5): 668.     CrossRef
  • Health‐promoting foods and food crops ofWest‐Africaorigin: The bioactive compounds and immunomodulating potential
    James Ayokunle Elegbeleye, Srinivasan Krishnamoorthy, Oluwaseun Peter Bamidele, Adeyemi A. Adeyanju, Olalekan J. Adebowale, Wisdom Selorm Kofi Agbemavor
    Journal of Food Biochemistry.2022;[Epub]     CrossRef
  • Phenolic Compounds from Leaves and Flowers of Hibiscus roseus: Potential Skin Cosmetic Applications of an Under-Investigated Species
    Luana Beatriz dos Santos Nascimento, Antonella Gori, Andrea Raffaelli, Francesco Ferrini, Cecilia Brunetti
    Plants.2021; 10(3): 522.     CrossRef
  • Phenolic Compounds in Extracts of Hibiscus acetosella (Cranberry Hibiscus) and Their Antioxidant and Antibacterial Properties
    Jae Il Lyu, Jaihyunk Ryu, Chang Hyun Jin, Dong-Gun Kim, Jung Min Kim, Kyoung-Sun Seo, Jin-Baek Kim, Sang Hoon Kim, Joon-Woo Ahn, Si-Yong Kang, Soon-Jae Kwon
    Molecules.2020; 25(18): 4190.     CrossRef
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Characterization of Agronomic Traits and Composition of Antioxidant Compounds in Sweet Sorghum (Sorghum bicolor L. Moench) Germplasms
Jae Il Lyu, Jaihyunk Ryu, Dong-Gun Kim, Jung Min Kim, Min-Kyu Lee, Jin-Baek Kim, Joon-Woo Ahn, Soon-Jae Kwon
Plant Breed. Biotech. 2019;7(2):132-140.   Published online June 1, 2019
DOI: https://doi.org/10.9787/PBB.2019.7.2.132

Sweet sorghum (Sorghum bicolor L. Moench) is one of the most important crops for bioethanol production and the provision of antioxidant compounds for human health. In this study, we investigated the 8 agronomic traits of 153 sweet sorghum germplasms, which demonstrated a variety of phenotypes. In particular, nine sweet sorghum germplasms exhibited a sugar content exceeding 20 Brix. Based on agronomic characteristics, we selected eight elite sweet sorghum germplasms that showed high-performance agronomic and growth characteristics such as tall height, large panicle size with short height, high sugar content, and seed-specific characteristics. The selected germplasms also showed significant differential amount of 3 antioxidant compounds of 3-deoxyanthocyanins, flavonoids, and tannins. SS113 contained the highest levels of total 3-deoxyanthocyanins with apigeninidin contents 3–9 fold higher than that of other germplasms, while SS129 had a white seed coat with the highest recorded total flavonoid level (7.52 mg/g) but no detectable 3-deoxyanthocyanins compounds. The characterization of the traits and compounds will be useful for basic research into the selection of suitable cultivars in the breeding of sweet sorghum.

Citations

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  • Grain yield, nutritional, polyphenols and antioxidant capacity in accessions of sorghum (Sorghum bicolor L. Moench)
    Silvia UÑATE-FRAGA, Josué I. GARCÍA-LÓPEZ, Antonio FLORES-NAVEDA, Norma RUIZ-TORRES, Sonia RAMÍREZ-BARRÓN, Agustín HERNÁNDEZ-JUÁREZ, Alejandro LOZANO-DEL RÍO, Julio C. TAFOLLA-ARELLANO
    Notulae Botanicae Horti Agrobotanici Cluj-Napoca.2022; 50(1): 12637.     CrossRef
  • Comparison of Salinity Tolerance Between Grain and Sweet Sorghum Germplasms [Sorghum Bicolor (L.) Moench]
    Jung Min Kim, Jae Il Lyu, Jaihyunk Ryu, Dong-Gun Kim, Min-Kyu Lee, Jin-Baek Kim, Bo-Keun Ha, Joon-Woo Ahn, Soon-Jae Kwon
    Korean Journal of Breeding Science.2020; 52(1): 32.     CrossRef
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