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Research Article

Identification of a New Race and Development of DNA Markers Associated with Powdery Mildew in Melon

Plant Breeding and Biotechnology 2016;4(2):225-233.
Published online: May 31, 2016

1Department of Horticulture, Sunchon National University, Suncheon 57922, Korea

2Plant Biotechnology Institute, Ibaraki Agricultural Center, Kasama 319-0206, Japan

*Corresponding author: Ill-Sup Nou, nis@sunchon.ac.kr, Tel: +82-61-750-3249, Fax: +82-61-750-5389
• Received: May 17, 2016   • Revised: May 21, 2016   • Accepted: May 25, 2016

Copyright © 2016 The Korean Society of Breeding Science

This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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    Journal of Plant Pathology.2025; 108(1): 777.     CrossRef
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    Horticulture Research.2024;[Epub]     CrossRef
  • Inheritance of Resistance to Race 5 of Powdery Mildew Fungus Podosphaera xanthii in Melon and Development of Race 5-Specific High Resolution Melting Markers
    Jeong-Eui Hong, Mohammad Rashed Hossain, Hee-Jeong Jung, Ill-Sup Nou
    Plant Breeding and Biotechnology.2022; 10(4): 272.     CrossRef
  • Development of powdery mildew race 5-specific SNP markers in Cucumis melo L. using whole-genome resequencing
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    Horticulture, Environment, and Biotechnology.2020; 61(2): 347.     CrossRef
  • Genetic Mapping and Nucleotide Diversity of Two Powdery Mildew Resistance Loci in Melon (Cucumis melo)
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    Phytopathology®.2020; 110(12): 1970.     CrossRef
  • PCR-Based InDel Marker Associated with Powdery Mildew-Resistant MR-1
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    Agronomy.2020; 10(9): 1274.     CrossRef
  • Identification of Two New Races of Podosphaera xanthii Causing Powdery Mildew in Melon in South Korea
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Identification of a New Race and Development of DNA Markers Associated with Powdery Mildew in Melon
Plant Breed. Biotech.. 2016;4(2):225-233.   Published online May 31, 2016
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Identification of a New Race and Development of DNA Markers Associated with Powdery Mildew in Melon
Plant Breed. Biotech.. 2016;4(2):225-233.   Published online May 31, 2016
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Identification of a New Race and Development of DNA Markers Associated with Powdery Mildew in Melon
Image Image
Fig. 1 Interaction of ten melon cultigens to race N5 in the leaf disc test 2 weeks after inoculation. Conidia growth was observed in susceptible cultigens indicated red circles. Cultigens 1 to 10 are respectively Fuyu3, PMR45, WMR29, Edisto47, PI414723, PMR5, PI124112, MR-1, ASL5, and Ig1.
Fig. 2 Resistant (red letters), susceptible (white letters), and intermediate (yellow letters) disease reactions of melon lines and their F1s against the race N5 of Podosphaera xanthii.
Identification of a New Race and Development of DNA Markers Associated with Powdery Mildew in Melon

Response of 10 melon cultigens to 7 reported races and a new race N5 of Podosphaera xanthii.

Cultigen Race New


1 N1 N2 5 A S O N5
Fuyu3 S S S S S S S S
PMR45 R R S S R R S S
WMR29 R R R S R R S S
Edisto47 R R R S R R S S
PI414723 R S S R R R S I
PMR5 R R R R R R S R
PI124112 R R R R R R S R
MR-1 R R R R R R I I
ASL5 R R R S S S S S
Ig1 R R R R R S R S

R: resistant, S: susceptible, I: Intermediate.

Resistance and susceptibly of melon cultigens collected from different sources against the race N5 of Podosphaera xanthii.

Race N5 Cultigen Seed sourcez)
Susceptible Andes, Andes 3, Andes 5, Otome, Takami, Leina, Amus, Yuka, Quincy, Lenon, Rupia red, Mikoto, Festa, Earl’s Arena, Sonata Syunjyu, Yellow king, Homerun star, Ginsen Seed company, Japan
P1, P2, P11, P14, P15, P18, P21, P22, P23, P25, P29, P32, L12 PBI
PMR45, Edisto47, WMR29, Ig1, Im5, Im9, It2 USDA, INRA, Okayama University
Resistant Mirano natsu I Seed company, Japan
P3 PBI
PMR5, PI124112 USDA

z)PBI: Plant Biotechnology Institute, Ibaraki Agriculture Institute, USDA: United States Department of Agriculture, USA, INRA: Institute National de la Recherche Agronomique, France.

Resistant and susceptible interaction of genes located in linkage groups (LG) II and XII for parents and their F1 lines of melon against N5 fungal race.

Line Resistant genes and locus of linkage map Response of race N5z)

LG II LG XII
Fuyu3 pm-II/pm-II pm-XII/pm-XII S
CM17187 pm-II/pm-II pm-XII/pm-XII S
PMR45 Pm-II/Pm-II pm-XII/pm-XII S
PMR5 Pm-II/Pm-II Pm-XII/Pm-XII R
RIL31 pm-II/pm-II Pm-XII/Pm-XII R
F1 line (Fuyu 3×RIL31) pm-II/pm-II Pm-XII/pm-XII S
F1 line (CM17187×PMR5) Pm-II/pm-II Pm-XII/pm-XII I
F1 line (PMR45×PMR5) Pm-II/Pm-II Pm-XII/pm-XII R
F1 line (PMR5×RIL31) Pm-II/pm-II Pm-XII/Pm-XII R

This interaction table has been developed comparing our screening results with mapping results of Fukino et al. (2008) and distribution information of resistant genes in different linkage groups (Kim et al. 2015).

z)R: resistant, S: susceptible, I: intermediate.

Resistant, intermediate and susceptible (3 classes) response of 50 F2 lines (CM17187×PMR5), 49 F2 lines (PMR45×PMR5), and 94 BC1F1 lines (PMR45×[PMR45×PMR5]) against the race N5 of Podosphaera xanthii and the goodness of fit of 3 classes with expected ratios after χ2 test.

F2 population Response to race N5 resistantz) χ2 testy)

Resistant Intermediate Susceptible χ2 DF P-value
F2 lines (CM17187×PMR5) 18 12 20 0.13 2 0.93
F2 lines (PMR45×PMR5) 35 0 14 0.33 1 0.56
BC1F1 lines (PMR45×[PMR45×PMR5]) 46 0 48 0.04 1 0.83

z)The number showed phenotype by inoculation of powdery mildew race N5.

y)The data shows the results of χ2 test according to segregation ratio of resistance:intermediate:susceptibility=3:2:3 for F2 lines of CM17187×PMR5, resistance:susceptibility=3:1 for F2 lines of PMR45×PMR5, resistance:susceptibility=1:1 for BC1F1 lines of PMR45×(PMR45×PMR5).

Polymorphism of PCR fragments obtained by using 6 SSR marker located in LG XII in susceptible lines CM17187, PMR45, and resistant line PMR5 of melon.

Line Marker (bp)

CMN22-45 CMN01-38 CMBR150 CMBR14 CMGAN80 CMAGN32
PMR45 269 225 283 175 171 191
CM17187 269 215 279 175 171 191
PMR5 264 219 281 158 183 193

PCR: polymerase chain reaction, SSR: simple sequence repeat, LG: linkage group.

Distribution of 50 F2 population (CM17187×PMR5) to three different categories (resistant homo, hetero, and susceptible homo against N5 fungal race) according to SSR genotyping by two markers.

CMBR120 (LG II)

SSR marker Marker type Resistant homo (196 bp) Hetero (184/196 bp) Susceptible homo (184 bp)
CMN01-38 (LG XII) Resistant homo (219 bp) Resistant (2/2)z) Resistant (4/4) Resistant (3/3)
Hetero (215/219 bp) Resistant (7/7) Intermediate (12/18) Susceptible (4/5)
Susceptible homo (215 bp) Susceptible (1/1) Susceptible (3/6) Susceptible (3/4)

z)The number of the matched line of genotype with phenotype for race N5/the number of genotyping line.

SSR: simple sequence repeat, LG: linkage group.

Distribution of 49 F2 population (PMR45×PMR5) to three different categories (resistant homo, hetero, and susceptible homo against N5 fungal race) according to SSR genotyping by two markers.

CMBR120 (LG II)

Marker Marker type Resistant homo (196 bp) Hetero Susceptible homo
CMN01-38 (LG XII) Resistant homo (219 bp) Resistant (11/11)z) -y) -
Hetero (219/225 bp) Resistant (24/27) - -
Susceptible homo (225 bp) Susceptible (11/11) - -

z)The number of the matched line of genotype with phenotype for race N5/the number of genotyping line.

y)‘-’ sign indicates absence of heterozygous or homozygous susceptible allele. The two parents are homozygous for resistant allele (located in LG II) and therefore F2 populations of PMR45×PMR5 were neither heterozygous nor homozygous susceptible.

LG: linkage group.

Table 1 Response of 10 melon cultigens to 7 reported races and a new race N5 of Podosphaera xanthii.

R: resistant, S: susceptible, I: Intermediate.

Table 2 Resistance and susceptibly of melon cultigens collected from different sources against the race N5 of Podosphaera xanthii.

PBI: Plant Biotechnology Institute, Ibaraki Agriculture Institute, USDA: United States Department of Agriculture, USA, INRA: Institute National de la Recherche Agronomique, France.

Table 3 Resistant and susceptible interaction of genes located in linkage groups (LG) II and XII for parents and their F1 lines of melon against N5 fungal race.

This interaction table has been developed comparing our screening results with mapping results of Fukino et al. (2008) and distribution information of resistant genes in different linkage groups (Kim et al. 2015).

R: resistant, S: susceptible, I: intermediate.

Table 4 Resistant, intermediate and susceptible (3 classes) response of 50 F2 lines (CM17187×PMR5), 49 F2 lines (PMR45×PMR5), and 94 BC1F1 lines (PMR45×[PMR45×PMR5]) against the race N5 of Podosphaera xanthii and the goodness of fit of 3 classes with expected ratios after χ2 test.

The number showed phenotype by inoculation of powdery mildew race N5.

The data shows the results of χ2 test according to segregation ratio of resistance:intermediate:susceptibility=3:2:3 for F2 lines of CM17187×PMR5, resistance:susceptibility=3:1 for F2 lines of PMR45×PMR5, resistance:susceptibility=1:1 for BC1F1 lines of PMR45×(PMR45×PMR5).

Table 5 Polymorphism of PCR fragments obtained by using 6 SSR marker located in LG XII in susceptible lines CM17187, PMR45, and resistant line PMR5 of melon.

PCR: polymerase chain reaction, SSR: simple sequence repeat, LG: linkage group.

Table 6 Distribution of 50 F2 population (CM17187×PMR5) to three different categories (resistant homo, hetero, and susceptible homo against N5 fungal race) according to SSR genotyping by two markers.

The number of the matched line of genotype with phenotype for race N5/the number of genotyping line.

SSR: simple sequence repeat, LG: linkage group.

Table 7 Distribution of 49 F2 population (PMR45×PMR5) to three different categories (resistant homo, hetero, and susceptible homo against N5 fungal race) according to SSR genotyping by two markers.

The number of the matched line of genotype with phenotype for race N5/the number of genotyping line.

‘-’ sign indicates absence of heterozygous or homozygous susceptible allele. The two parents are homozygous for resistant allele (located in LG II) and therefore F2 populations of PMR45×PMR5 were neither heterozygous nor homozygous susceptible.

LG: linkage group.