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"So-Hyeon Baek"

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"So-Hyeon Baek"

Research Articles
Inheritance and Quantitative Trait Loci Analysis of Resistance Genes to Bruchid and Bean Bug in Mungbean (Vigna radiata L. Wilczek)
Myon-Gi Hong, Kil-Hyun Kim, Ja-Hwan Ku, Jin-Kyo Jeong, Min-Jung Seo, Chang-Hwan Park, Yul-Ho Kim, Hong-Sik Kim, Yong-Kwon Kim, So-Hyeon Baek, Dool-Yi Kim, Su-Kwon Park, Sun-Lim Kim, Jung-Kyung Moon
Plant Breed. Biotech. 2015;3(1):39-46.   Published online March 31, 2015
DOI: https://doi.org/10.9787/PBB.2015.3.1.039

Bruchid (Callosobruchus chinenesis L.) and pod sucking bug (Riptortus clavatus Thunberg) are serious insect pests during the reproduction stage and seed storage period of legume crops worldwide. However, few sources of resistance to each of these insects have been identified and characterized, and no genetic studies have been carried out with simultaneous tests of these two insects. In this study, the inheritance of seed resistance to Callosobruchus chinenesis L. and Riptortus clavatus Thunberg was examined in a mungbean cultivar, Jangan mungbean, which was developed by backcrossing with the V2709 resistant donor. The F1, F2, and F3 seed generations were developed from the cross between susceptible and resistant parents, and evaluated for resistance to the two insects. It was found that resistance to bruchid and bean bug was controlled by a single dominant gene in the F1 and F2 seeds. However, the segregation pattern of reciprocal reaction to each insect in F2 seeds showed seeds were susceptible to each insect. These results suggest that the resistance genes in Jangan mungbean to bug and weevil are either different or closely linked with each other. A genetic linkage map 13.7 cM in length with 6 markers was successfully constructed. Two QTLs were identified for bruchid resistance, and a QTL for bean bug resistance was detected. One of the QTLs for resistance to bruchid was shared with the QTL for bean bug. These newly developed closely linked markers will be used for cloning of the resistance genes to bruchid and bean bug in the future.

Citations

Citations to this article as recorded by  
  • Induction of Plant Defences and Production of Kaempferol‐7‐O‐Glucoside Against Spodoptera litura in Resistant Wild Mungbean
    Sook‐Kuan Lee, Bing‐Rong Chen, Chih‐Yu Lin, Cheng‐Hsiang Kuo, Yi‐Ju Chen, Ya‐Ping Lin, Yuan‐Yun Zhang, Ripley H. Tisdale, Cheng‐Ruei Lee, Wen‐Po Chuang, Hieng‐Ming Ting
    Plant, Cell & Environment.2026; 49(7): 4558.     CrossRef
  • Metabolic Discrimination of Mungbean (Vigna radiata L.) Sprout Depending on Growth Time from Multivariate Analysis of FT-IR Spectroscopy Data
    Song Yie Park, Yeong Jae Ah, Eun Ji Suh, Eun Bin Choi, Mi Ja Lee, Han Gyeol Lee, Woo Duck Seo, Yu-Na Kim, Seung-Yeob Song
    Korean Journal of Breeding Science.2024; 56(3): 269.     CrossRef
  • Genome-Wide Association Studies on Resistance to Pea Weevil: Identification of Novel Sources of Resistance and Associated Markers
    Salvador Osuna-Caballero, María J. Cobos, Carmen M. Ruiz, Osman Z. Wohor, Nicolas Rispail, Diego Rubiales
    International Journal of Molecular Sciences.2024; 25(14): 7920.     CrossRef
  • Next-Generation Sequencing in the Development of Climate-Resilient and Stress-Responsive Crops – A Review
    Amitava Roy, Suman Dutta, Sumanta Das, Malini Roy Choudhury
    The Open Biotechnology Journal.2024;[Epub]     CrossRef
  • Molecular mechanisms, genetic mapping, and genome editing for insect pest resistance in field crops
    Shabir H. Wani, Mukesh Choudhary, Rutwik Barmukh, Pravin K. Bagaria, Kajal Samantara, Ali Razzaq, Jagdish Jaba, Malick Niango Ba, Rajeev K. Varshney
    Theoretical and Applied Genetics.2022; 135(11): 3875.     CrossRef
  • Thirty Years of Mungbean Genome Research: Where Do We Stand and What Have We Learned?
    Prakit Somta, Kularb Laosatit, Xingxing Yuan, Xin Chen
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Screening of endemic wild Vigna accessions for resistance to three bruchid species
    Revanasidda Aidbhavi, Aditya Pratap, Prasoon Verma, Amrit Lamichaney, Sanjay M. Bandi, S.D. Nitesh, Mohd Akram, Meenal Rathore, Bansa Singh, Narendra P. Singh
    Journal of Stored Products Research.2021; 93: 101864.     CrossRef
  • Two polygalacturonase-inhibiting proteins (VrPGIP) of Vigna radiata confer resistance to bruchids (Callosobruchus spp.)
    Qinxue Zhang, Qiang Yan, Xingxing Yuan, Yun Lin, Jingbin Chen, Ranran Wu, Chenchen Xue, Yuelin Zhu, Xin Chen
    Journal of Plant Physiology.2021; 258-259: 153376.     CrossRef
  • Biotic and Abiotic Constraints in Mungbean Production—Progress in Genetic Improvement
    Ramakrishnan M. Nair, Abhay K. Pandey, Abdul R. War, Bindumadhava Hanumantharao, Tun Shwe, AKMM Alam, Aditya Pratap, Shahid R. Malik, Rael Karimi, Emmanuel K. Mbeyagala, Colin A. Douglas, Jagadish Rane, Roland Schafleitner
    Frontiers in Plant Science.2019;[Epub]     CrossRef
  • Effects of radiofrequency on the development and performance of Callosobruchus chinensis (Coleoptera: Chrysomelidae: Bruchinae) on three different leguminous seeds
    Rameswor Maharjan, Hwijong Yi, Jeongjoon Ahn, Gwang Hyun Roh, Chunggyoo Park, Youngnam Yoon, Yunwoo Jang, Inyoul Baek, Yongchul Kim, Soondo Bae
    Applied Entomology and Zoology.2019; 54(3): 255.     CrossRef
  • Mung bean (Vigna radiata) cultivars mediated oviposition preference and development of Callosobruchus chinensis (Coleoptera: Chrysomelidae: Bruchinae)
    Rameswor Maharjan, Hwijong Yi, Hyuntae Kim, Youngnam Yoon, Yunwoo Jang, Soondo Bae
    Applied Entomology and Zoology.2018; 53(1): 55.     CrossRef
  • Bruchid pest management in pulses: past practices, present status and use of modern breeding tools for development of resistant varieties
    S.K. Mishra, M.L.R. Macedo, S.K. Panda, J. Panigrahi
    Annals of Applied Biology.2018; 172(1): 4.     CrossRef
  • Beans with Benefits—The Role of Mungbean (<i>Vigna radiate</i>) in a Changing Environment
    Lisa Pataczek, Zahir Ahmad Zahir, Maqshoof Ahmad, Saima Rani, Ramakrishnan Nair, Roland Schafleitner, Georg Cadisch, Thomas Hilger
    American Journal of Plant Sciences.2018; 09(07): 1577.     CrossRef
  • Novel Alleles of Two Tightly Linked Genes Encoding Polygalacturonase-Inhibiting Proteins (VrPGIP1 and VrPGIP2) Associated with the Br Locus That Confer Bruchid (Callosobruchus spp.) Resistance to Mungbean (Vigna radiata) Accession V2709
    Anochar Kaewwongwal, Jingbin Chen, Prakit Somta, Alisa Kongjaimun, Tarika Yimram, Xin Chen, Peerasak Srinives
    Frontiers in Plant Science.2017;[Epub]     CrossRef
  • Chilling susceptibility in mungbean varieties is associated with their differentially expressed genes
    Li-Ru Chen, Chia-Yun Ko, William R. Folk, Tsai-Yun Lin
    Botanical Studies.2017;[Epub]     CrossRef
  • Mechanism of Resistance in Mungbean [Vigna radiata (L.) R. Wilczek var. radiata] to bruchids, Callosobruchus spp. (Coleoptera: Bruchidae)
    Abdul R. War, Surya Murugesan, Venkata N. Boddepalli, Ramasamy Srinivasan, Ramakrishnan M. Nair
    Frontiers in Plant Science.2017;[Epub]     CrossRef
  • Identification of single nucleotide polymorphism markers associated with resistance to bruchids (Callosobruchus spp.) in wild mungbean (Vigna radiata var. sublobata) and cultivated V. radiata through genotyping by sequencing and quantitative trait locus a
    Roland Schafleitner, Shu-mei Huang, Shui-hui Chu, Jo-yi Yen, Chen-yu Lin, Miao-rong Yan, Bharath Krishnan, Mao-sen Liu, Hsiao-feng Lo, Chien-yu Chen, Long-fang O. Chen, Dung-chi Wu, Thu-Giang Thi Bui, Srinivasan Ramasamy, Chih-wei Tung, Ramakrishnan Nair
    BMC Plant Biology.2016;[Epub]     CrossRef
  • Construction of an integrated map and location of a bruchid resistance gene in mung bean
    Lixia Wang, Chuanshu Wu, Min Zhong, Dan Zhao, Li Mei, Honglin Chen, Suhua Wang, Chunji Liu, Xuzhen Cheng
    The Crop Journal.2016; 4(5): 360.     CrossRef
  • Genomic and transcriptomic comparison of nucleotide variations for insights into bruchid resistance of mungbean (Vigna radiata [L.] R. Wilczek)
    Mao-Sen Liu, Tony Chien-Yen Kuo, Chia-Yun Ko, Dung-Chi Wu, Kuan-Yi Li, Wu-Jui Lin, Ching-Ping Lin, Yen-Wei Wang, Roland Schafleitner, Hsiao-Feng Lo, Chien-Yu Chen, Long-Fang O. Chen
    BMC Plant Biology.2016;[Epub]     CrossRef
  • A gene encoding a polygalacturonase-inhibiting protein (PGIP) is a candidate gene for bruchid (Coleoptera: bruchidae) resistance in mungbean (Vigna radiata)
    Sathaporn Chotechung, Prakit Somta, Jinbing Chen, Tarika Yimram, Xin Chen, Peerasak Srinives
    Theoretical and Applied Genetics.2016; 129(9): 1673.     CrossRef
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T-DNA Inheritance Stability of Resveratrol Rice Iksan526 over Multi-generations
Yang Qin, Hong-Il Ahn, Su-Yoen Park, Myung-Ho Lim, Hee-Jong Woo, Kong-Sik Shin, Jin-Hyoung Lee, Hyun-Suk Cho, So-Hyeon Baek, Soon-Ki Park, Soon-Jong Kweon
Plant Breed. Biotech. 2014;2(3):268-275.   Published online September 30, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.3.268

Confirmation of T-DNA inheritance and stability requires testing of several parameters such as phenotypic performance of transgenic lines, transgene integrity structure and expression stability for at least three consecutive generations, and Mendelian inheritance analysis, which are very important to transgenic breeding and commercialization of genetically modified crops (GMOs). In the present study, we measured nine agronomic and yield-related traits of Iksan526 and confirmed stable phenotypic performance comparing to the donor variety Dongjin over three years. Transgene integrity structure, flanking sequence, functional element copy numbers, absence of backbone sequence and transgene expression were all verified in Iksan526 over three consecutive generations, indicating a stable inheritance of the transgene. In addition, phenotypic and genotypic segregation were analyzed on F2 and F3 populations derived from a cross of Dongjin/Iksan526, and results complied with Mendel’s law of segregation based on single transgene locus. This study demonstrated detailed analyses and confirmation of transgene event Iksan526 which is crucial for commercialization of GMO.

Citations

Citations to this article as recorded by  
  • Analysis of T-DNA integration events in transgenic rice
    Wankui Gong, Yun Zhou, Rui Wang, Xiaoli Wei, Lei Zhang, Yan Dai, Zhen Zhu
    Journal of Plant Physiology.2021; 266: 153527.     CrossRef
  • Genetic Stability, Inheritance Patterns and Expression Stability in Biotech Crops
    Laura Privalle, Patricia Back, Apurv Bhargava, Zach Bishop, Krystal Cisneros, Isabelle Coats, Ine Criel, Lien Dhondt, Travis Draughn, Barb Fowler, Brad Franklin, Durba Ghoshal, Jim Lor, Jennifer Massengil, Sofie Moens, Tyson Mooney, Dannyel Nelson, Karoli
    OBM Genetics.2020; 04(04): 1.     CrossRef
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Molecular Characterization of Transgenic Rice Producing Resveratrol
Yang Qin, Hong-Il Ahn, Soon-Jong Kweon, So-Hyeon Baek, Kong-Sik Shin, Hee-Jong Woo, Hyun-Suk Cho, Jin-Hyoung Lee, Myung-Ho Lim
Plant Breed. Biotech. 2013;1(4):406-415.   Published online December 31, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.4.406

Resveratrol, a plant phenolic compound, has potential therapeutic benefits due to its antioxidant properties. This is substantiated by previous studies that show that resveratrol derived from rice grains is an effective treatment agent for metabolic syndrome. Here, we characterized the T-DNA sequence, inserted T-DNA structure, copy number, integrity of the transgene locus, resveratrol synthase gene expression and resveratrol contents in the grains of two resveratrol transgenic rice lines, Iksan515 and Iksan526. The T-DNA transformation vector contained two expression cassettes of the resveratrol synthase gene under the control of the ubiquitin promoter and the bar selection marker gene under the control of the CaMV35S promoter. Flanking sequence analysis indicated that the T-DNAs were inserted into intergenic regions of chromosome 4 for Iksan515 and chromosome 12 for Iksan526. Two T-DNAs connected in an inverted repeat structure at a single locus of the rice genome were identified by whole genome sequencing and Southern blot hybridization in both Iksan515 and Iksan526. No novel open reading frames (ORFs) around insertion sites, sequences encoding allergenic or toxic protein, or other unintended effects by T-DNA insertion were found in either case. In addition, resveratrol synthase gene expression in leaves and resveratrol detection in brown rice grains suggested the successful expression of the inserted foreign resveratrol synthase gene in two transgenic rice lines.

Citations

Citations to this article as recorded by  
  • Assessment of potential gene flow from resveratrol-enriched genetically modified rice to non-genetically modified rice and weedy rice
    Sang Dae Yun, Sung Dug Oh, Yang Qin, Myung-Ho Lim, Hye Lin Kim, Je Yeon Choi, Eun Young Kim, Sung Aeong Oh, Seong-Kon Lee, Doh-Won Yun, Tae-Hun Ryu, Jae Kwang Kim, Soon Ki Park
    Journal of Plant Biotechnology.2025;[Epub]     CrossRef
  • Arachis hypogaea resveratrol synthase 3 alters the expression pattern of UDP-glycosyltransferase genes in developing rice seeds
    Choonseok Lee, Woo-Jong Hong, Ki-Hong Jung, Ha-Cheol Hong, Dool-Yi Kim, Hyun-Choong Ok, Man-Soo Choi, Soo-Kwon Park, Jaehyun Kim, Hee-Jong Koh, Sara Amancio
    PLOS ONE.2021; 16(1): e0245446.     CrossRef
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QTL Mapping for Paste Viscosity Characteristics Related to Eating Quality and QTL-NIL Development in Japonica Rice (Oryza sativa L.)
Young-Chan Cho, Jung-Pil Suh, Mi-Ra Yoon, Man-Ki Baek, Yong-Jae Won, Jeong-Heui Lee, Hyun-Su Park, So-Hyeon Baek, Jeom-Ho Lee
Plant Breed. Biotech. 2013;1(4):333-346.   Published online December 31, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.4.333

Eating and cooking qualities are the most important trait in japonica rice breeding program. In this study, we performed genetic analysis to identify quantitative trait loci (QTLs) related to eating quality using 182 recombinant inbred lines (RILs) derived from a cross between two japonica cultivars, ‘Ilpumbyeo’ and ‘Moroberekan’. Parameters for eating quality being investigated include alkali digestive value (ADV) and amylose content (AC) for physico-chemical properties, glossiness of cooked rice (GCR), and six paste viscosity properties, peak viscosity (PV), hot-paste viscosity (HPV), cool-paste viscosity (CPV), breakdown (BD), setback (SB), and consistency viscosity (CSV) in RILs. This study revealed 28 QTLs on chromosomes 1, 3, 4, 5, 6, 7, 8, 9, and 10. Two QTL regions on chromosomes 3 and 6 were clustered with QTLs for physico-chemical property, GCR, and paste viscosity. The QTL loci for ADV, AC, GCR, PV, HPV, CPV, BD, SB, and CSV of paste viscosity properties in wx locus on chromosome 6 are the most important region for improving the texture of cooked rice. Three QTLs for PV, BD, and SB were detected on chromosome 9. PV and BD were highly positively correlated while SB showed high negative correlation with PV and BD. The QTLs for PV, BD, and SB are important to develop high eating quality rice lines of delayed retrogradation of cooked rice. Seven QTL-NILs substituted with Ilpumbyeo genetic background in most loci except for qLB4.2 for leaf blast resistance from Moroberekan allele, are expected to improve cooking and eating quality in japonica rice.

Citations

Citations to this article as recorded by  
  • Analysis of Seed Vigor and Grain Quality Traits under Accelerated Aging Treatment in japonica Rice
    Kyeongmin Kang, Seung Young Lee, Su-Kyung Ha, Gileung Lee, Jae-Ryoung Park, Mina Jin, Jung-Pil Suh, Youngjun Mo, Hyun-Sook Lee
    Korean Journal of Breeding Science.2025; 57(3): 217.     CrossRef
  • Creating of novel Wx allelic variations significantly altering Wx expression and rice eating and cooking quality
    Pei Zhao, Yuxia Liu, Zhuyun Deng, Lingtong Liu, Tengwei Yu, Gege Ge, Bingtang Chen, Tai Wang
    Journal of Plant Physiology.2024; 303: 154384.     CrossRef
  • Preponderant alleles at Hd1 and Ehd1 lead to photoperiod insensitivity in japonica rice varieties
    Liting Sun, Tianzi Lin, Dedao Jing, Bo Yu, Shengyuan Zeng, Chuang Li, Huafei Qian, Cancan Du, Qingfeng Hu, Jun Yang, Yiwen Zhou, Zhangping Wu, Hongbing Gong
    Crop Breeding and Applied Biotechnology.2023;[Epub]     CrossRef
  • Using Heading date 1 preponderant alleles from indica cultivars to breed high‐yield, high‐quality japonica rice varieties for cultivation in south China
    Yujia Leng, Yihong Gao, Long Chen, Yaolong Yang, Lichao Huang, Liping Dai, Deyong Ren, Qiankun Xu, Ya Zhang, Kimberly Ponce, Jiang Hu, Lan Shen, Guangheng Zhang, Guang Chen, Guojun Dong, Zhenyu Gao, Longbiao Guo, Guoyou Ye, Qian Qian, Li Zhu, Dali Zeng
    Plant Biotechnology Journal.2020; 18(1): 119.     CrossRef
  • Identification and characteristics of quantitative trait locus for grain protein content, TGP12, in rice (Oryza sativa L.)
    Takayuki Kashiwagi, Jun Munakata
    Euphytica.2018;[Epub]     CrossRef
  • Genetic mapping of the qGCR6 locus affecting glossiness of cooked rice
    Sheng-Shan Wang, Kai-Yi Chen, Yann-Rong Lin, Rong-Kuen Chen
    Euphytica.2017;[Epub]     CrossRef
  • QTL mapping of the pasting properties of wheat flour treated by papain digestion
    Fang‐fang Wang, Tong‐tong Liu, Qing‐fang Li, Yu‐ling An, Chu‐peng Xie, Xiaoxiao Sun, Kai Liu, Zhi‐ying Deng, Ji‐chun Tian, Jian‐sheng Chen
    Starch - Stärke.2017;[Epub]     CrossRef
  • Genome-wide association study of eating and cooking qualities in different subpopulations of rice (Oryza sativa L.)
    Feifei Xu, Jinsong Bao, Qiang He, Yong-Jin Park
    BMC Genomics.2016;[Epub]     CrossRef
  • Cup Arrangement Ranking Method for a Rapid and Small-Sample Sensory Evaluation of Cooked Rice
    Jeom-Sig Lee, Jieun Kwak, Mi-Ra Yoon, Jeong-Heui Lee, Eok-Keun Ahn, Hyang-Mee Park, Yong-Jae Won, Ji Young Shon, Jun Hwan Kim, Jung-Pil Suh, Areum-Chun, Jaebuhm Chun, Jang Hee Lee
    Korean Journal of Breeding Science.2015; 47(2): 105.     CrossRef
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Bioassay for the Response of Resveratrol Transgenic Rice Lines to Bacterial and Fungal Diseases
Yang Qin, Suk-Man Kim, Hong-Il Ahn, Jin-Hyoung Lee, So-Hyeon Baek, Kong-Sik Shin, Hee-Jong Woo, Hyun-Suk Cho, Soon-Jong Kweon, Myung-Ho Lim
Plant Breed. Biotech. 2013;1(3):253-261.   Published online September 30, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.3.253

Resveratrol is a stilbenoid and phytoalexin produced in response to stresses, such as wounding, and pathogen attacks by bacteria or fungi. Two resveratrol rice lines, Iksan515 and Iksan526, were used to examine resistance against Korean pathogen races for bacterial blight, leaf blast, and brown leaf spot. The screening test for bacterial blight demonstrated an increased susceptibility of both transgenic lines to K1 race, and a more susceptible Iksan515 to K2. Phenotypic evaluation for resistance to brown leaf spot also revealed the susceptibility of Iksan526 to the disease which did not significantly differ from the isogenic variety ‘Dongjin’, and a slightly more susceptible Iksan515 to the disease compared to check. When the lines were screened with three races (KJ301, KJ101 and KJ133) of leaf blasts in the field, both transgenic lines exhibited resistance but at the same level with ‘Dongjin’. Our overall findings suggest that foreign phytoalexin resveratrol production in transgenic rice lines transformed with resveratrol synthase gene did not confer resistance against fungal and bacterial diseases.

Citations

Citations to this article as recorded by  
  • Effect of genetically modified rice producing resveratrol on the soil microbial communities
    Soo-In Sohn, Young-Ju Oh, Byung-Yong Kim, Soon-Jong Kweon, Hyun-Suk Cho, Tae-Hoon Ryu
    Journal of the Korean Society for Applied Biological Chemistry.2015; 58(6): 795.     CrossRef
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