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"Mi-Young Chung"

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"Mi-Young Chung"

Research Article

Characterization and Expression Analysis of Peroxidases and Glucan Synthase Like Genes in Cucumis melo L
Jewel Howlader, Kanij Rukshana Sumi, Hoy-Taek Kim, Arif Hasan Khan Robin, Jong-In Park, Mi-Young Chung, Ill-Sup Nou
Plant Breed. Biotech. 2016;4(2):212-224.   Published online May 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.2.212

Powdery mildew (PM) is a severe fungal disease for melon cultivation worldwide. Stress resistance related genes could be important tools to address this problem. In this study, we retrieved defense related peroxidase and glucan synthase genes from Melon Genome Database ‘Melonomics’. Thereafter, we analyzed the genes in silico. We conducted protein blast in the NCBI database and found a high degree of homology among them. Based on the highest protein homology we named two isoforms of Cucumis melo peroxidase 2-like genes (CmPrx2-1 and CmPrx2-2) and one glucan synthase1-like gene (CmGLS1). In reverse transcription- polymerase chain reaction (PCR), all 3 genes showed organ specific expression in a C. melo line, SCNU1154. Real-time quantitative PCR expression of these 3 genes was conducted in the infected leaf samples by PM fungus Podosphaera xanthii and also treated leaf samples by exogenous phytohormones (salicylic acid and methyl jasmonate). The CmPrx2-2 gene was up-regulated in response to all seven races of PM fungus whereas up-regulation or down-regulation of CmPrx2-1 gene was race-specific. The CmGLS1 gene was down-regulated in response to all races except one race. The CmPrx2-1, CmPrx2-2, and CmGLS1 genes were up-regulated under both salicylic acid and methyl jasmonate treatments but their level of expression was higher in salicylic acid treated plants compared to methyl jasmonate. Therefore, we speculate that defense response of the three tested genes is largely mediated by the salicylic acid signaling pathway under PM infection. Taken together, the data presented herein may be useful resources in the development of PM stress resistant in C. melo L.

Citations

Citations to this article as recorded by  
  • Induction of defense related enzymatic and non-enzymatic antioxidants and their gene expression imparts resistance to muskmelon against Fusarium oxysporum f. sp. melonis infection
    Chahak Jain, Shilpa Gupta, Sat Pal Sharma, Manjeet Kaur Sangha, Navraj Kaur Sarao, Anu Kalia, Shabda Verma
    Journal of Plant Biochemistry and Biotechnology.2025; 34(4): 941.     CrossRef
  • Magnaporthe grisea infection modifies expression of anti-oxidant genes in finger millet [Eleusine coracana (L.) Gaertn.]
    Jinu Jacob, Madhu Pusuluri, Balakrishna Domathoti, Indra Kanta Das
    Journal of Plant Pathology.2019; 101(1): 129.     CrossRef
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Review Articles

Utility of DNA Barcoding for Plant Biodiversity Conservation
Dhivya Selvaraj, Jong-In Park, Mi-Young Chung, Yong-Gu Cho, Sathishkumar Ramalingam, Ill-Sup Nou
Plant Breed. Biotech. 2013;1(4):320-332.   Published online December 31, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.4.320

DNA barcoding is a technique that provides rapid identification of species without using morphological cues. The method employs relatively small-standardized DNA fragments as tags to define or discover species. In plants, the mitochondrial genome evolves much more slowly than in animals. There is currently no consensus on which candidate markers comprise the best plant DNA barcoding region; however, DNA barcodes such as rbcL, matK, psbA-trnH and ITS have been proposed for the plant kingdom. And also very recently the chloroplast intergenic spacer (IGS) like trnE-trnT, trnT-psbD, ndhF-rpl32 and rpl14-rpl16 were also employed for discriminating the cultivar species. The region ITS2 showed better intra-species variation, followed by psbA-trnH. Several analyses reveal that the ITS2 region is able to distinguish all tested species of the plant kingdom, but evaluations of DNA barcodes have to be conducted for more species covering many genera to confirm the above results. In this review we discussed the current view of DNA barcoding.

Citations

Citations to this article as recorded by  
  • Genetic fingerprints of flora: revolutionizing plant identification with DNA barcoding
    Maqsooda Perveen, Suhail Ashraf, Khalid Z. Masoodi
    Genetic Resources and Crop Evolution.2026;[Epub]     CrossRef
  • DNA Barcoding for Managing Blackberry Genetic Resources on Black Sea Coast (Russia)
    Igor Yu. Zhuravlev, Anton V. Korzhuk, Elena S. Tyurina, Nadezhda A. Dobarkina, Elena N. Markova, Evgenija I. Gereeva, Ioanna M. Protasova, Mikhail T. Menkov, Irina V. Rozanova, Lilija Yu. Shipilina, Elena K. Khlestkina, Alexey S. Rozanov
    Diversity.2025; 17(12): 869.     CrossRef
  • Molecular identification and evaluation of yield and grain quality of buckwheat varieties in Vietnam
    Linh Hong Ta, Duc Thanh Pham, Yen Thi Hoang Le, Trung Duc Tran, Ha Thi Thu Pham, Trung Thanh Nguyen, Tram Bao Tran, Tao Xuan Vu
    Vegetos.2025;[Epub]     CrossRef
  • DNA barcodes in Egyptian olive cultivars (Olea europaea L.) using the rbcL and matK coding sequences
    Eglal M. Said, M. E. Hassan
    Journal of Crop Science and Biotechnology.2023; 26(4): 447.     CrossRef
  • Filling gaps of reference DNA barcodes in Syzygium from rainforest fragments in Sumatra
    Ridha Wati, Fitri Yola Amandita, Fabian Brambach, Iskandar Z. Siregar, Oliver Gailing, Carina Carneiro de Melo Moura
    Tree Genetics & Genomes.2022;[Epub]     CrossRef
  • Morphological and Molecular Characterization of Some Egyptian Six-Rowed Barley (Hordeum vulgare L.)
    Azza H. Mohamed, Ahmad A. Omar, Ahmed M. Attya, Mohamed M. A. Elashtokhy, Ehab M. Zayed, Rehab M. Rizk
    Plants.2021; 10(11): 2527.     CrossRef
  • Botanical origin authentication of dietary supplements by DNA‐based approaches
    Liliana Grazina, Joana S. Amaral, Isabel Mafra
    Comprehensive Reviews in Food Science and Food Safety.2020; 19(3): 1080.     CrossRef
  • HRM analysis targeting ITS1 and matK loci as potential DNA mini-barcodes for the authentication of Hypericum perforatum and Hypericum androsaemum in herbal infusions
    Joana Costa, Bruna Campos, Joana S. Amaral, M. Eugénia Nunes, M. Beatriz P.P. Oliveira, Isabel Mafra
    Food Control.2016; 61: 105.     CrossRef
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Molecular Genetic Aspects of Self-incompatibility in Brassicaceae
Hee-Jeong Jung, Nasar Uddin Ahmed, Jong-In Park, Mi-Young Chung, Yong-Gu Cho, Ill-Sup Nou
Plant Breed. Biotech. 2013;1(3):205-217.   Published online September 30, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.3.205

Molecular genetic studies of self-incompatibility (SI) are the most accentuating part in the way of advancement of reproductive mechanisms in flowering plants. In the Brassicaceae plants, self-incompatibility has been mapped genetically to a single chromosomal location where several closely linked genes have been identified. Recently, various studies have provided a novel insight into the basis of specificity in the S-receptor kinase (SRK) and S-locus protein 11 or S-locus Cysteine-rich (SP11/SCR) interaction, the nature of the signaling cascade that culminates in the inhibition of ‘self’ pollen, and the physiological and morphological changes that are associated with transitions between the outbreeding and inbreeding modes of mating in the Brassicaceae. In this review, we discuss the current view of the molecular genetic aspects of the self-incompatibility in Brassicaceae.

Citations

Citations to this article as recorded by  
  • Genetics Behind Sexual Incompatibility in Plants: How Much We Know and What More to Uncover?
    Sukanya Chakraborty, Smritikana Dutta, Malay Das
    Journal of Plant Growth Regulation.2023; 42(11): 7164.     CrossRef
  • Assessment of genotypic variation and self-incompatibility in cauliflower (Brassica oleracea var. botrytis) genotypes

    International Journal of Biosciences (IJB).2020; : 173.     CrossRef
  • Progress on deciphering the molecular aspects of cell-to-cell communication in Brassica self-incompatibility response
    Nidhi Sehgal, Saurabh Singh
    3 Biotech.2018;[Epub]     CrossRef
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Research Article
Characterization of Thaumatin-like Gene Family and Identification of Pectobacterium carotovorum subsp. carotovorum Inducible Genes in Brassica oleracea
Nasar Uddin Ahmed, Jong-In Park, Hee-Jeong Jung, Mi-Young Chung, Yong-Gu Cho, Ill-Sup Nou
Plant Breed. Biotech. 2013;1(2):111-121.   Published online June 30, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.2.111

Cabbage (Brassica oleracea) is a very important vegetable worldwide and biotic stress is a crucial issue for this crop. Enhancement of resistance by exploiting stress resistance-related genes offers the most efficient approach to address this issue. Among the stress resistance-related genes, thaumatin-like proteins (TLPs) play a vital role in enhancement of resistance against stresses. In this study, we identified 12 TLPs from B. oleracea genomic DNA sequencing database, analyzed their sequences and compared with other published pathogenesis-related TLPs, and found a high degree of homology with them. In addition, these genes showed an organ-specific expression, three of which expressed differentially after Pectobacterium carotovorum subsp. carotovorum infection in cabbage plants. Data obtained in this study suggest the probable involvement of TLPs in resistance against soft rot disease of Brassica.

Citations

Citations to this article as recorded by  
  • Antifungal activity of citral against Fusarium wilt in tomatoes and induction of the upregulation of glucanase, chitinase, and thaumatin-like protein plant defense genes
    Portia Osei-Obeng, Leonard Muriithi Kiirika, Aggrey Bernard Nyende
    Journal of Natural Pesticide Research.2024; 10: 100097.     CrossRef
  • Genome-wide comprehensive characterization and expression analysis of TLP gene family revealed its responses to hormonal and abiotic stresses in watermelon (Citrullus lanatus)
    Chet Ram, Shagufta Danish, Mahipal Singh Kesawat, Bhupendra Singh Panwar, Manjusha Verma, Lalit Arya, Sheel Yadav, Vedprakash Sharma
    Gene.2022; 844: 146818.     CrossRef
  • Molecular Characterisation of Soybean Osmotins and Their Involvement in Drought Stress Response
    Giulia Ramos Faillace, Paula Bacaicoa Caruso, Luis Fernando Saraiva Macedo Timmers, Débora Favero, Frank Lino Guzman, Ciliana Rechenmacher, Luisa Abruzzi de Oliveira-Busatto, Osmar Norberto de Souza, Christian Bredemeier, Maria Helena Bodanese-Zanettini
    Frontiers in Genetics.2021;[Epub]     CrossRef
  • Genome-wide analysis and evolution of plant thaumatin-like proteins: a focus on the origin and diversification of osmotins
    Giulia Ramos Faillace, Andreia Carina Turchetto-Zolet, Frank Lino Guzman, Luisa Abruzzi de Oliveira-Busatto, Maria Helena Bodanese-Zanettini
    Molecular Genetics and Genomics.2019; 294(5): 1137.     CrossRef
  • Alfin-like transcription factor family: characterization and expression profiling against stresses in Brassica oleracea
    Md. Abdul Kayum, Jong-In Park, Nasar Uddin Ahmed, Gopal Saha, Mi-Young Chung, Jong-Goo Kang, Ill-Sup Nou
    Acta Physiologiae Plantarum.2016;[Epub]     CrossRef
  • cDNA-AFLP analysis reveals the adaptive responses of citrus to long-term boron-toxicity
    Peng Guo, Yi-Ping Qi, Lin-Tong Yang, Xin Ye, Huan-Xin Jiang, Jing-Hao Huang, Li-Song Chen
    BMC Plant Biology.2014;[Epub]     CrossRef
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  • 6 Crossref