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"Kyung-Jun Lee"

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"Kyung-Jun Lee"

Research Articles
Genetic Diversity and Population Structure of Mongolian Wheat Based on SSR Markers: Implications for Conservation and Management
Narantsetseg Ya, Sebastin Raveendar, N Bayarsukh, Myagmarsuren Ya, Jung-Ro Lee, Kyung-Jun Lee, Myoung-Jae Shin, Gyu-Taek Cho, Kyung-Ho Ma, Gi-An Lee
Plant Breed. Biotech. 2017;5(3):213-220.   Published online September 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.3.213

Production of spring wheat, the major crop in Mongolia, accounts for 98% of the cultivated area. Understanding genetic variability in existing gene bank accessions is critical for collection, conservation and use of wheat germplasms. To determine genetic diversity and population structure among a representative collection of Mongolian local wheat cultivars and lines, 200 wheat accessions were analyzed with 15 SSR markers distributed throughout the wheat genome. A total of 85 alleles were detected, with three to five alleles per locus and a mean genetic richness of 5.66. Average genetic diversity index was 0.69, with values ranging from 0.37–0.80. The 200 Mongolian wheat accessions were mainly divided into two subgroups based on structure and phylogenetic analyses, and some phenotypes were divergent by the subgroups. Results from this study will provide valuable information for conservation and sustainable use of Mongolian wheat genetic resources.

Citations

Citations to this article as recorded by  
  • The Genetic Diversity of Tunisian Sea Barley (Hordeum marinum ssp. marinum): Insights from Cross-species SSRs
    Warda Saoudi, Wael Taamalli, Mounawer Badri, António Martin, Chedly Abdelly
    Plant Molecular Biology Reporter.2026;[Epub]     CrossRef
  • Harnessing genetic potentials for drought tolerance in wheat (Triticum aestivum L.) using tolerance indices and molecular markers
    Mst. Anamika Amzad, Md. Arifuzzaman, Md. Ashraful Alam
    Gene Reports.2025; 40: 102230.     CrossRef
  • Morphological characterization and molecular diversity assessment of rust resistant genetic stocks of wheat
    Sneha Adhikari, S. C. Bhardwaj, O. P. Gangwar, Pramod Prasad, Charu Lata, Subodh Kumar, Gulab Chand
    Tropical Plant Pathology.2024; 49(4): 525.     CrossRef
  • Structure and genetic diversity of macauba [Acrocomia aculeata (Jacq.) Lodd. ex Mart.] approached by SNP markers to assist breeding strategies
    Bruno Galvêas Laviola, Adriano dos Santos, Erina Vitório Rodrigues, Larissa Pereira Ribeiro Teodoro, Paulo Eduardo Teodoro, Tatiana Barbosa Rosado, Cíntia Gonçalves Guimarães, Léo Duc Haa Carson Schwartzhaupt da Conceição
    Genetic Resources and Crop Evolution.2022; 69(3): 1179.     CrossRef
  • Genetic diversity, population structure and relationship of Ethiopian barley (Hordeum vulgare L.) landraces as revealed by SSR markers
    Allo A. Dido, M. S. R. Krishna, Ermias Assefa, Dawit T. Degefu, B. J. K. Singh, Kassahun Tesfaye
    Journal of Genetics.2022;[Epub]     CrossRef
  • Genetic diversity and population structure in Jatropha (Jatropha curcas L.) based on molecular markers
    Adriana de Souza Carneiro, Adriano dos Santos, Bruno Galvêas Laviola, Larissa Pereira Ribeiro Teodoro, Paulo Eduardo Teodoro, Erina Vitório Rodrigues
    Genetic Resources and Crop Evolution.2022; 69(1): 245.     CrossRef
  • Association analysis for agronomic traits in wheat under terminal heat stress
    Adeel Khan, Munir Ahmad, Mukhtar Ahmed, Kulvinder Singh Gill, Zahid Akram
    Saudi Journal of Biological Sciences.2021; 28(12): 7404.     CrossRef
  • Genetic Diversity and Genome-Wide Association Study of Seed Aspect Ratio Using a High-Density SNP Array in Peanut (Arachis hypogaea L.)
    Kunyan Zou, Ki-Seung Kim, Kipoong Kim, Dongwoo Kang, Yu-Hyeon Park, Hokeun Sun, Bo-Keun Ha, Jungmin Ha, Tae-Hwan Jun
    Genes.2020; 12(1): 2.     CrossRef
  • Population structure of Nepali spring wheat (Triticum aestivum L.) germplasm
    Kamal Khadka, Davoud Torkamaneh, Mina Kaviani, Francois Belzile, Manish N. Raizada, Alireza Navabi
    BMC Plant Biology.2020;[Epub]     CrossRef
  • Development of genomic simple sequence repeat markers for Glycyrrhiza lepidota and cross-amplification of other Glycyrrhiza species
    Jun Hyoung Bang, Chi Eun Hong, Sebastin Raveendar, Kyong Hwan Bang, Kyung Ho Ma, Soon Wook Kwon, Hojin Ryu, Ick Hyun Jo, Jong-Wook Chung
    PeerJ.2019; 7: e7479.     CrossRef
  • Genome-Wide Genetic Diversity and Population Structure of Tunisian Durum Wheat Landraces Based on DArTseq Technology
    Cyrine Robbana, Zakaria Kehel, M’barek Ben Naceur, Carolina Sansaloni, Filippo Bassi, Ahmed Amri
    International Journal of Molecular Sciences.2019; 20(6): 1352.     CrossRef
  • Melatonin Mitigates Salt Stress in Wheat Seedlings by Modulating Polyamine Metabolism
    Qingbo Ke, Jun Ye, Bomei Wang, Jianhong Ren, Lina Yin, Xiping Deng, Shiwen Wang
    Frontiers in Plant Science.2018;[Epub]     CrossRef
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Genetic Diversity and Population Structure of Asian Tomato Accessions Based on Simple-Sequence Repeats
Sebastin Raveendar, Jong-Wook Chung, Gi-An Lee, Jung-Ro Lee, Kyung-Jun Lee, Myoung-Jae Shin, Yang-Hee Cho, Kyung-Ho Ma
Plant Breed. Biotech. 2016;4(3):306-314.   Published online August 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.3.306

Tomato (Solanum lycopersicum L.) is one of the most economically important plants in the family Solanaceae. Understanding its genetic diversity of accessions is vital for additional collection of tomato germplasms. The
objective
of this study was to determine the genetic diversity and population structure of 355 tomato accessions from Asia using 18 simple-sequence repeats (SSRs). A total of 176 alleles were detected at an average of ten alleles per SSR locus. The average major allele frequency and polymorphic information content were 0.69 and 0.39, respectively. Model-based structure analysis revealed two subpopulations (88%), including admixtures (11%) in the 355 Asian tomato accessions, consistent with clustering results based on genetic distance. The overall FST value was 0.135, indicating a moderate differentiation between the inferred subpopulations. Analysis of molecular variance showed that the genetic variance among geographical groups was less than 6%, in contrast to 86% of genetic variance among individuals. The results from this study will provide important information for future germplasm conservation and improvement programs for tomato.

Citations

Citations to this article as recorded by  
  • Next generation sequencing technologies to explore the diversity of germplasm resources: Achievements and trends in tomato
    Pasquale Tripodi
    Computational and Structural Biotechnology Journal.2022; 20: 6250.     CrossRef
  • Genetic diversity, population structure and validation of SSR markers linked to Sw-5 and I-2 genes in tomato germplasm
    Saidaiah Pidigam, Vishnukiran Thuraga, Suchandranath Babu Munnam, Geetha Amarapalli, Gopal Kuraba, Someswara Rao Pandravada, Srinivas Nimmarajula, Hari Kishan Sudini
    Physiology and Molecular Biology of Plants.2021; 27(8): 1695.     CrossRef
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