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"Cluster analysis"

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Evaluation of Genetic Diversity of Azerbaijani Grape Varieties (Vitis ssp.) by Using ISSR Markers
Ruhangiz Mammadova, Vugar Salimov, Shader Alizade, Nurlan Amrahov
Plant Breed. Biotech. 2025;13:167-175.
Published online September 1, 2025
DOI: https://doi.org/10.9787/PBB.2025.13.167

Genetic diversity among 20 Azerbaijani grape (Vitis vinifera L.) accessions was assessed using 10 Inter-Simple Sequence Repeat (ISSR) markers to elucidate relationships among samples and identify a convenient marker for determining genetic diversity. Based on the polymorphic information parameters such as PIC, EMR, MI, and RP were critically analyzed for utilizing these ISSR primers for genetic variability and 4 ISSR (UBC 811, UBC 812, UBC 815, UBC 857) markers were selected for future germplasm management. The total number of identified bands varied between 2-5. The maximum PIC value was observed in UBC 857 (0.478). Among genotypes, Ag oval kishmish and Yumru kishmish cultivars had the closest genetic similarity index (0.913), while Ag oval kishmish and Marandi, Yerli Muskat and Yabani uzum 1, Yerli Muskat and Yumru kishmish cultivars had the most distant genetic similarity index (0.406). These findings highlight both the complexity of grapevine genetic structure and the value of ISSR markers for detecting non-obvious relationships.

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Research Articles
Characterization of Post-Rainy Season Grown Indigenous and Exotic Germplasm Lines of Sorghum for Morphological and Yield Traits
Ashok Badigannavar, A. Ashok Kumar, G. Girish, T.R. Ganapathi
Plant Breed. Biotech. 2017;5(2):106-114.   Published online June 1, 2017
DOI: https://doi.org/10.9787/PBB.2017.5.2.106

Sorghum is a major staple crop and vital for the marginal farmers in Asian and African countries. Landraces or germplasm lines adapted to biotic and abiotic stresses are the prime source of adaptive traits in the crop breeding programs. In order to assess the genetic variability, 141 exotic germplasm lines and 36 popular varieties were evaluated for eight agro-morphological traits. Wide range of values were observed for grain yield (6.6–124.4 g/plant), seed index (1.5–7.1 g/100 seeds), panicle length (8–44 cm) and panicle width (7.25 cm). High genotypic and phenotypic coefficient of variation was observed for grain yield per plant. The values of broad sense heritability in the sorghum core population ranged from 0.75 to 0.99. Seed weight, days to flowering, panicle width and leaf area were significantly correlated with grain yield (P ≤ 0.01). Seed weight was positively correlated with panicle width (correlation coefficient 0.31), while negatively correlated with panicle length (correlation coefficient −0.15). Cluster analysis resolved all the genotypes into four major clusters. Among germplasm lines, TSG-313 had high seed weight of 7.05 g/100 seeds, while TSG-325 had highest grain yield of 124.4 g/plant as against control variety. Germplasm lines with high heritability scores would help us to utilise them in recombination breeding.

Citations

Citations to this article as recorded by  
  • Post-flowering drought stress response of advanced breeding lines and cultivars in post-rainy season sorghum [Sorghum bicolor (L.)] Moench
    S.K. Pooja, Basavaraj Bagewadi, D.P. Biradar, I.S. Katageri, Rakeshkumar S. Choudhary, B. Fakrudin
    South African Journal of Botany.2025; 178: 266.     CrossRef
  • Genetic variability assessment of post‐flowering drought stress tolerance in selected sorghum (Sorghum bicolor L. Moench) genotypes
    Yirgalem Tsehaye, Fetien Abay, Taye Tadesse, Kassahun Bantte, Temesgen M. Menamo
    Agrosystems, Geosciences & Environment.2025;[Epub]     CrossRef
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Genotypic Variation among Okra (Abelmoschus esculentus (L.) Moench) Germplasms in South India
Kishor Doddanakatte Shivaramegowda, Arya Krishnan, Yogeesh Kebbahalli Jayaramu, Vinod Kumar, Yashoda, Hee-Jong Koh
Plant Breed. Biotech. 2016;4(2):234-241.   Published online May 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.2.234

Thirty-six okra germplasms were grown and evaluated for yield and yield related traits at the Department of Plant Breeding and Genetics, Vellayani, Trivandrum, Kerala. The germplasms studied possessed sufficient variability for all the traits. High genotypic coefficient of variation (GCV) and phenotypic coefficient of variation (PCV) were noticed for almost all characters and narrow difference between GCV and PCV suggest that environmental influence is minimal for the traits studied. High estimates of heritability coupled with high to moderate genetic advance as percent over mean was recorded for all the characters considered. Yield had positive and significant association with number of fruits per plant, fruit weight, fruit girth and number of primary branches indicating that selection based on these characters may improve yield. Principal component analysis indicated that first three principal components contributed for sixty percent total variation among ten characters describing accessions. The cluster analysis revealed that hybridization of cluster I with cluster IV would be beneficial to develop promising varieties under diverse climatic conditions in India.

Citations

Citations to this article as recorded by  
  • Nutri-biochemical traits’ analysis in biotic stress condition in okra (Abelmoschus esculentus L.)
    Sparsh Nathoo, Ramesh Kumar Yadav, Suman Lata, N D Vinay, Susheel Kumar Sharma, Rakesh Bhardwaj, Prakash Kumar, Nirankar, Rajendra Kumar
    Journal of Plant Biochemistry and Biotechnology.2026; 35(2): 599.     CrossRef
  • Stem anatomical variation and fiber-yielding potential of flax (Linum usitatissimum L.) genotypes
    Most. Morsada Khatun, Md. Riyadh Arefin, A. K. M. Golam Sarwar
    Discover Plants.2026;[Epub]     CrossRef
  • Unlocking genetic diversity in Indian germplasm and breeding lines of Muskdana (Abelmoschus moschatus L.)
    Yash Pandey, Trishna Chaturvedi, Anil Kumar Gupta, Ram Swaroop Verma, Gunjan Tiwari
    Genetic Resources and Crop Evolution.2025; 72(4): 4657.     CrossRef
  • Genetic diversity among Ghanaian Okra (Abelmoschus esculentus L.) Germplasm using Morphological and Molecular markers
    Andrews Appiah, Richard Akromah, Alexander Wireko Kena, Benjamin Annor, Stephen Amoah, Emmanuel Yaw Owusu, Benjamin Karikari
    Ecological Genetics and Genomics.2025; 35: 100347.     CrossRef
  • Genotypic Variation in Root System Architecture in Okra (Abelmoschus esculentus (L.) Moench) for Adaptive Breeding in Soil Resource‐Limited Environments
    Godswill Hygienus, Vincent Agyemang Opoku, Mathias Neumann Andersen, Paul Agu Asare, Michael Osei Adu
    Journal of Agronomy and Crop Science.2025;[Epub]     CrossRef
  • Characterization and Genetic Diversity of Tea (Camellia sinensis (L.) O. Kuntze) Genotypes for Waterlogging Tolerance
    Md. Sabibul Haque, A. K. M. Golam Sarwar, Md. Riyadh Arefin
    Phyton.2024; 93(12): 3411.     CrossRef
  • Isolation of yellow vein mosaic virus (YVMV)‐resistant mutants of okra (Abelmoschus esculentus L.) through applied mutagenesis
    Soham Hazra, Shouvik Gorai, Sourav Roy, Suvojit Bose, Pranab Hazra, Arup Chattopadhyay, Md. Nasim Ali, Sanjay Jambhulkar, Anirban Maji
    Plant Breeding.2024; 143(2): 232.     CrossRef
  • Study on genetic divergence, association between morphological traits and path analysis among different okra (Abelmoschus esculentus L. Moench) genotypes
    S. Vennila, R. Elangaimannan, S. LubnaArshiya, S. Sudhasha
    Vegetos.2024; 39(1): 172.     CrossRef
  • EFFECT OF LEUCAENA LEUCOCEPHALA LEAFY BIOMASS AND NPK FERTILISER ON THE GROWTH AND YIELD OF OKRA, ABELMOSCHUS ESCULENTUS (L.) MOENCH
    Adams Latif MOHAMMED, Kaddiri Nanbaala Kumodu NASIM, Ali MORO
    Journal of Applied Life Sciences and Environment.2023; 55/2022(4(192)): 419.     CrossRef
  • FIELD EVALUATION OF SOME OKRA VARIETIES IN A GUINEA SAVANNAH AGRO-ECOLOGY OF NIGERIA.
    G.G JIBUNG, D.M DAMIYA, D.Y DALOKOM
    Greener Journal of Agricultural Sciences.2023; 13(4): 244.     CrossRef
  • Optimized Box–Behnken Design Combined Response Surface Methodology to Determine Calcium and Iron Contents Using Visible, Atomic Emission and Atomic Absorption Spectrophotometry in Vegetables and Wastewater Samples
    Sirhan Al-Batty, S K Manirul Haque, Nafisur Rahman, Syed Najmul Hejaz Azmi
    Journal of AOAC INTERNATIONAL.2022; 106(1): 99.     CrossRef
  • Correlation and Path Coefficient Analysis of Fruit Yield Attributes in Forty Genotypes of Okra (Abelmoschus esculentus)
    Ronke Justina Komolafe, Omolayo Johnson Ariyo, Christopher Olusanya Alake
    Agricultural Research.2022; 11(1): 15.     CrossRef
  • Variability Assessment of Okra (Abelmoschus esculentus (L.) Moench) Genotypes Based on Their Qualitative Traits
    Nesru Temam, Wassu Mohammed, Shimelis Aklilu, Isabel Marques
    International Journal of Agronomy.2021; 2021: 1.     CrossRef
  • Optimization of gamma radiation dose for induction of mutations in okra
    Soham Hazra, Shouvik Gorai, V Umesh Kumar, Sudip Bhattacharya, Anirban Maji, Sanjay Jambhulkar, Nasim Ali, Arup Chattopadhyay
    International Journal of Vegetable Science.2021; 27(6): 574.     CrossRef
  • SNP marker assay and candidate gene identification for sex expression via genotyping-by-sequencing-based genome-wide associations (GWAS) analyses in Oriental melon (Cucumis melo L.var.makuwa)
    D.S. Kishor, Yoonji Noh, Woon-Ho Song, Gung Pyo Lee, Younghoon Park, Jin-Kee Jung, Eun-Jo Shim, Sung-Chur Sim, Sang-Min Chung
    Scientia Horticulturae.2021; 276: 109711.     CrossRef
  • Genetic Dissection in Morphological Traits of Sesbania Genotypes
    Sontosh C. Chanda, M. Sabibul Haque, A. K. M. Golam Sarwar, M. Nuruzzaman, M. Amir Hossain
    Proceedings of the National Academy of Sciences, India Section B: Biological Sciences.2020; 90(5): 1153.     CrossRef
  • Evaluation of okra (Abelmoschus esculentus L. Moench) genotypes for important quantitative characters
    Abdul Majid Ansari, Ekhlaque Ahmad, Nazrussalam Nazrussalam, D.N. Singh
    International Journal of Agricultural and Applied Sciences.2020; 1(1): 1.     CrossRef
  • Evaluation of Whole-Genome Sequence, Genetic Diversity, and Agronomic Traits of Basmati Rice (Oryza sativa L.)
    D.S. Kishor, Jeonghwan Seo, Joong Hyoun Chin, Hee-Jong Koh
    Frontiers in Genetics.2020;[Epub]     CrossRef
  • Agro morphological Characterization and Evaluation of Okra [Abelmoschus esculentus (L.) Moench] Genotypes for Yield and Other Variability Components at Melkassa, Central Ethiopia
    Nesru Temam, Wassu Mohamed, Shimelis Aklilu
    MOJ Ecology & Environmental Sciences.2020;[Epub]     CrossRef
  • Interactive Effects of Genotype and Nitrogen on the Phenology and Yield Determination of Okra [Abelmoschus esculentus (L.)]
    Saba Fatima, Muhammad Sohail Khan, Muhammad Nadeem, Ilham Khan, Kashif Waseem, Muhammad Nisar, Muhammad Iqbal
    International Journal of Plant Production.2019; 13(1): 73.     CrossRef
  • Genetic relationships among okra (Abelmoschus esculentus (L.) Moench) cultivars in Nigeria
    Bashir O. Bello, D. AMINU
    Acta agriculturae Slovenica.2017;[Epub]     CrossRef
  • Varietal performance and correlation of okra pod yield and yield components
    Dattijo Aminu, Omolaran Bashir Bello, Babagana Abba Gambo, Alafe Hakeem Azeez, Oludare James Agbolade, Ali Iliyasu, Usman Abdulrahman Abdulhamid
    Acta Universitatis Sapientiae, Agriculture and Environment.2016; 8(1): 112.     CrossRef
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  • 22 Crossref