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Research Article

Screening and Breeding for Biofortification of Rice with Protein and High Lysine Contents

Plant Breeding and Biotechnology 2021;9(3):199-212.
Published online: September 1, 2021

1Department of Southern Area Crop Science, National Institute of Crop Science, RDA, Miryang 50424, Korea

2National Institute of Crop Science, Rural Development Administration, Wanju 55365, Korea

*Corresponding author Jun-Hyeon Cho, hy4779@korea.kr, Tel: +82-55-350-1169, Fax: +82-55-352-3059
• Received: July 6, 2021   • Revised: August 15, 2021   • Accepted: August 19, 2021

Copyright © 2021 by the Korean Society of Breeding Science

This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Screening and Breeding for Biofortification of Rice with Protein and High Lysine Contents
Plant Breed. Biotech.. 2021;9(3):199-212.   Published online September 1, 2021
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Screening and Breeding for Biofortification of Rice with Protein and High Lysine Contents
Image Image Image Image Image Image
Fig. 1 Distribution of protein content used in free amino acid analysis.
Fig. 2 Distribution of total amino acid content.
Fig. 3 Distribution of lysine ratio to total amino acid content.
Fig. 4 Factor analysis of essential amino acids and protein content.
Fig. 5 Genealogical diagram of ‘Milyang320’.
Fig. 6 Lysine content of ‘Milyang320’ cultivated on 5 different regions.
Screening and Breeding for Biofortification of Rice with Protein and High Lysine Contents

Number of plant materials used in free amino acid content analysis.

Origin Subspecies Total
Japonica Indica
Korea 70 9 79
Japan 13 4 17
China 7 1 8
Philippines 2 15 17
EU 2 0 2
USA 2 0 2
Bangladesh 0 9 9
Total 96 38 134

HPLC conditions for the analysis of free amino acid.

Time (minutes) Mobile phase (A) Mobile phase (B)
0.0 95 5
3.0 95 5
24.0 45 55
25.0 20 80
31.0 20 80
34.5 95 5
35.0 95 5

Protein contents of 134 lines used in free amino acids analysis.

No. of lines lines Protein contents (%)
2 YR30635-11-2-4, Kusahonami 6.7-6.9
37 Baekogchal, Boramchan, Geumgang1, Haiami, Heugjinmi, Hopum, Hwaseong, Hyeonpum, Ilmi, Jinsumi, Junam, Keunnun, Keunpum, Miho, Saeilmi, Saeilpum, Saenuri, Samkwang, Seolgaeng, Yeonghojinmi, Youngjin, Milyang330, YR30100-15-4-2, YR30098-4B-377, YR29150-1, Koshihikari, Milky Queen, Satojiman, Akenohoshi, Dragon Eye ball 100, Hosiaoba, IR24, Kasalath, LGC-1, Midorinomochi, Sasanishiki BL4, YR27499-B-B-B-327-1-1 7.1-8.0
57 Aranghyangchal, Aromi, Baegjinju1, Chucheong, Dasan2, Deuraechan, Dongjin1, Geonganghongmi, Geonyang2, Goami, Hanareum2, Hanareum4, Hanareumchal, Heughyangchal, Heugnam, Hongjinju, Hwawang, Hyangmibyeo2, Jeogjinju, Jeogjinjuchal, Jinmi, Jopyeong, Josaengheugchal, Mipum, Nampyeong, Odae, Saegoami, Saemimyeon, Sanggol, Shingil, Shingwang, Shinpyeong, Milyang331, YR30636-1-3-1, YR29278-18-3-1-2, YR30054-4B-137, YR30056-4B-180, YR28744-B-B-B-1, Akidagomachi, Apo, Bugkyeong2012-2, Cheongmu, Habataki, IR64, IR72, Gillim collection 1, IR66, IR73103-B-1-1-2-1-K1, Kinuhikari, Lemont, LGC-soft, IC19 8.1-9.0
Manjushree, Musashino7, N29, Odorokimochi, Sanghaehyanghyeolna
17 Anmi, Danpyeong, Dodamssal, Goami2, Goami4, Heugjinju, Unkwang, Milyang320, Basmati389, Cakmak, Hawn, Kendao12, LA1, Langdao7, IC35, Sanya4, Dharial 9.1-10.0
4 Nunkeunheukchal, C18, Hasawi IRGC16817, Galileo 10.1-11.0
0 - 11.1-12.8
7 Dharial derived mutant C39, C45, C136, C225, C162, C207, C237 12.9-14.8

Content of essential amino acids among leading valuable lines used in the analysis.

Lines Amino acids contents (mg/g)
Aspartic acid Glutamic acid Serine Histidine Glycine Threonine Arginine Alanine Tyrosine Valine Phenyl-alanine Isoleucine Leucine Lysine Proline Total
Aromi 7.18 16.16 4.15 1.72 3.25 3.50 6.20 4.55 2.11 4.53 4.19 3.19 6.41 1.90 2.16 71.20
Chucheong 5.11 10.83 3.22 1.43 2.60 2.57 4.27 3.62 0.84 2.86 2.61 1.87 4.35 1.08 0.75 48.02
Dharial mutant C39 6.69 14.11 3.82 1.56 2.94 3.26 6.12 4.09 1.83 4.05 3.72 2.78 5.74 1.78 1.93 64.42
Dodamssal 7.56 14.96 4.26 1.93 3.64 4.01 6.76 4.67 2.00 4.31 4.17 2.96 6.35 2.64 2.39 72.61
Geonyang2 6.96 16.71 4.51 1.87 3.78 3.06 6.91 5.14 2.75 4.78 4.29 3.28 7.59 2.03 1.49 75.17
Dharial mutant C45 12.74 28.12 7.30 3.43 5.90 5.27 10.98 7.67 4.05 7.70 7.63 5.52 11.35 3.86 3.25 124.77
Goami 7.45 16.35 4.50 1.91 3.69 3.98 6.34 4.82 1.99 4.28 4.26 2.97 6.69 2.40 2.12 73.74
Goami2 8.99 16.49 5.05 2.28 4.55 4.72 7.49 5.55 2.28 4.87 4.59 3.34 7.18 3.35 2.07 82.80
Goami4 8.99 15.92 4.82 2.22 4.42 4.31 7.47 5.34 2.20 4.74 4.46 3.26 6.79 3.12 1.80 79.87
Haiami 6.94 14.00 3.94 1.90 3.37 3.33 5.16 4.22 1.02 3.75 3.64 2.58 5.75 2.36 2.57 64.52
Hanareum2 7.04 15.05 4.29 1.90 3.57 4.00 6.01 4.56 1.99 4.15 4.05 2.85 6.35 2.37 1.56 69.76
Milyang23 7.13 16.10 4.47 1.86 3.53 3.88 6.99 4.77 2.25 4.53 4.38 3.18 6.78 2.15 1.17 73.16
Nampyeong 6.42 14.14 4.18 1.64 3.49 3.78 6.26 4.27 1.92 3.65 3.75 2.55 5.82 2.08 0.92 64.88
Nunkeunheukchal 8.82 18.32 5.29 2.28 4.31 4.48 8.07 5.49 2.52 4.75 4.90 3.36 7.43 2.53 1.58 84.12
Saeilmi 5.99 13.06 3.73 1.57 0.05 3.02 5.51 4.05 1.40 3.65 3.52 2.49 5.31 1.57 1.74 56.65
Dharial mutant C162 12.87 29.56 7.52 3.51 5.53 5.50 11.86 7.94 4.64 7.94 7.94 5.64 11.80 3.75 4.16 130.16
Milyang320 8.06 16.08 4.56 2.49 3.78 3.63 7.05 5.34 2.45 5.04 4.39 3.48 7.37 2.87 2.40 78.97
Basmati389 6.92 14.85 4.03 1.68 3.13 3.70 6.36 4.49 2.32 4.58 4.15 3.30 6.47 1.42 1.54 68.94
IR72 6.48 15.01 4.11 1.68 3.31 3.92 6.12 4.59 2.17 4.23 4.11 3.06 6.37 1.31 0.70 67.17
Koshihikari 5.22 11.47 3.19 1.43 2.57 2.92 5.28 3.52 1.60 3.35 3.13 2.38 4.93 1.08 0.64 52.72
Dharial mutant C207 10.42 25.20 6.71 2.61 5.19 5.35 10.66 7.09 4.04 6.89 7.03 5.03 10.42 2.18 1.81 110.63
LA1 8.56 15.85 4.56 2.29 3.87 4.40 6.55 4.98 2.08 4.18 4.38 3.03 6.65 2.92 2.54 76.85
LGC-soft 5.37 13.53 3.91 1.53 3.22 3.29 6.19 4.41 2.16 3.97 3.69 2.74 6.55 1.27 2.51 64.33
Dharial mutant C237 12.92 29.40 7.29 3.64 5.91 5.32 11.81 7.91 4.45 8.44 8.10 6.18 12.06 3.69 1.87 129.00
Dharial 4.50 11.52 3.56 1.54 2.61 2.71 6.17 3.86 1.76 3.51 3.56 2.43 5.10 0.80 0.08 53.70
Average (134 lines) 6.99 14.93 4.14 1.88 3.40 3.61 6.41 4.49 2.06 4.20 4.03 2.94 6.24 2.06 1.82 69.19
Max (134 lines) 12.92 29.56 7.52 3.64 5.91 6.37 11.86 7.94 4.64 8.44 8.10 6.18 12.06 3.86 8.38 130.16
Min (134 lines) 4.50 10.83 3.15 1.32 0.05 2.57 4.27 3.45 0.84 2.70 2.61 1.87 4.35 0.80 0.08 48.02

Ratio of essential amino acids to total amino acid content among leading valuable lines used in the analysis.

Lines Total amino acid (mg/g) Ratio of essential amino acids to the total amino acids (%) Protein (%)
Lysine Leucine Isoleucine Threonine Phenylalanine Valine Histidine
Aromi 71.20 2.7 9.0 4.5 4.9 5.9 6.4 2.4 8.9
Chucheong 48.02 2.3 9.1 3.9 5.3 5.4 5.9 3.0 8.2
Dharial mutant C39 64.42 2.8 8.9 4.3 5.1 5.8 6.3 2.4 12.9
Dodamssal 72.61 3.6 8.7 4.1 5.5 5.7 5.9 2.7 9.2
Geonyang2 75.17 2.7 10.1 4.4 4.1 5.7 6.4 2.5 8.8
Dharial mutant C45 124.77 3.1 9.1 4.4 4.2 6.1 6.2 2.8 13.8
Goami 73.74 3.3 9.1 4.0 5.4 5.8 5.8 2.6 8.9
Goami2 82.80 4.1 8.7 4.0 5.7 5.5 5.9 2.7 9.8
Goami4 79.87 3.9 8.5 4.1 5.4 5.6 5.9 2.8 9.5
Haiami 64.52 3.7 8.9 4.0 5.2 5.6 5.8 2.9 7.9
Hanareum2 69.76 3.4 9.1 4.1 5.7 5.8 5.9 2.7 8.4
Milyang23 73.16 2.9 9.3 4.3 5.3 6.0 6.2 2.5 9.0
Nampyeong 64.88 3.2 9.0 3.9 5.8 5.8 5.6 2.5 8.3
Nunkeunheukchal 84.12 3.0 8.8 4.0 5.3 5.8 5.6 2.7 10.4
Saeilmi 56.65 2.8 9.4 4.4 5.3 6.2 6.4 2.8 7.6
Dharial mutant C162 130.16 2.9 9.1 4.3 4.2 6.1 6.1 2.7 14.8
Milyang320 78.97 3.6 9.3 4.4 4.6 5.6 6.4 3.2 9.2
Basmati389 68.94 2.1 9.4 4.8 5.4 6.0 6.6 2.4 9.2
IR72 67.17 1.9 9.5 4.6 5.8 6.1 6.3 2.5 8.7
Koshihikari 52.72 2.1 9.4 4.5 5.5 5.9 6.4 2.7 7.6
Dharial mutant C207 110.63 2.0 9.4 4.6 4.8 6.4 6.2 2.4 14.3
LA1 76.85 3.8 8.7 3.9 5.7 5.7 5.4 3.0 9.5
LGC-soft 64.33 2.0 10.2 4.3 5.1 5.7 6.2 2.4 8.5
Dharial mutant C237 129.00 2.9 9.3 4.8 4.1 6.3 6.5 2.8 14.8
Dharial 53.70 1.5 9.5 4.5 5.1 6.6 6.5 2.9 9.3
Average (134 lines) 69.19 3.0 9.0 4.2 5.2 5.8 6.1 2.7 8.7
Max (134 lines) 130.16 4.1 10.2 4.9 6.4 6.6 6.7 3.2 14.8
Min (134 lines) 48.02 1.5 8.5 3.2 4.1 5.4 4.6 2.3 6.7

Correlation coefficient of essential amino acids and protein content.

Variables Lysine Leucine Isoleucine Threonine Phenyl-alanine Valine Histidine Total amino acid Protein
Lysine 1
Leucine −0.624*** 1
Isoleucine −0.439*** 0.502*** 1
Threonine 0.036 −0.144 −0.621*** 1
Phenylalanine −0.582*** 0.549*** 0.622*** −0.264* 1
Valine −0.379*** 0.471*** 0.947*** −0.666*** 0.515*** 1
Histidine 0.319** −0.269** −0.234** 0.123 −0.207* −0.189* 1
Total 0.027 −0.019 0.045 −0.307** 0.317** −0.079 −0.061 1
Protein −0.130 0.047 0.067 −0.264** 0.406*** −0.048 −0.105 0.918*** 1

Amino acids contents and ratio of lysine among floury lines ‘Milyang320’.

Amino acids Contents Ratio of lysine to Nampyeong (%)
Nampyeong LA 1 Geonyang2 Milyang320 LA1 Geonyang2 Milyang320
Cysteine 0.17 0.15 0.16 0.18 84 92 94
Methionine 0.17 0.16 0.16 0.20 90 91 102
Apartic acid 0.63 0.71 0.62 0.73 109 94 102
Treonine 0.27 0.30 0.27 0.31 106 94 101
Serine 0.37 0.39 0.40 0.42 99 101 98
Glutamic acid 1.23 1.18 1.32 1.35 92 102 96
Glycine 0.33 0.35 0.34 0.38 101 98 99
Alanine 0.40 0.43 0.46 0.49 103 107 106
Valine 0.38 0.40 0.41 0.44 100 100 100
Isoleucine 0.26 0.29 0.28 0.31 105 99 102
Leucine 0.58 0.61 0.68 0.70 99 109 105
Tyrosine 0.32 0.32 0.40 0.40 96 120 109
Phenylalanine 0.39 0.41 0.40 0.42 100 95 94
Lysine 0.27 0.36 0.26 0.34 130 91 111
Histidine 0.18 0.20 0.18 0.21 109 94 104
Arginine 0.57 0.57 0.59 0.61 94 97 92
Proline 0.37 0.38 0.39 0.42 97 98 98
Tryptophan 0.07 0.08 0.08 0.09 105 102 108
Total 6.96 7.29 7.38 8.00 - - -

Amino acids contents of ‘Milyang320’ cultivated in 5 different regions.

Amino acids Amino acids content based on 5 different regions (%)
Miryang Jeonju Suweon Gangwon (Chuncheon) Gyeonggi (Hwaseong)
Milyang320 Nampyeong Milyang320 Nampyeong Milyang320 Nampyeong Milyang320 Nampyeong Milyang320 Nampyeong
Apartic acid 0.67 0.60 0.73 0.60 0.70 0.61 0.62 0.53 0.69 0.60
Treonine 0.28 0.25 0.30 0.26 0.29 0.26 0.26 0.23 0.29 0.25
Serine 0.38 0.36 0.40 0.36 0.39 0.36 0.35 0.30 0.39 0.35
Glutamic acid 1.19 1.16 1.21 1.15 1.24 1.17 1.07 0.94 1.22 1.11
Glycine 0.34 0.31 0.38 0.31 0.36 0.31 0.32 0.28 0.36 0.31
Alanine 0.43 0.38 0.46 0.38 0.46 0.38 0.40 0.33 0.45 0.38
Valine 0.38 0.36 0.40 0.35 0.41 0.36 0.35 0.31 0.40 0.35
Isoleucine 0.25 0.24 0.27 0.23 0.27 0.24 0.23 0.20 0.26 0.23
Leucine 0.61 0.55 0.62 0.54 0.63 0.55 0.54 0.44 0.61 0.53
Tyrosine 0.32 0.30 0.31 0.28 0.32 0.25 0.28 0.24 0.32 0.29
Phenylalanine 0.37 0.36 0.38 0.35 0.38 0.36 0.33 0.30 0.37 0.35
Lysine 0.32 0.27 0.36 0.27 0.34 0.27 0.30 0.25 0.33 0.27
Histidine 0.18 0.16 0.20 0.16 0.20 0.17 0.17 0.14 0.20 0.16
Arginine 0.57 0.57 0.60 0.56 0.60 0.55 0.52 0.47 0.60 0.54
Proline 0.41 0.39 0.41 0.37 0.41 0.38 0.38 0.33 0.41 0.38
Total 6.70 6.26 7.03 6.16 6.99 6.21 6.10 5.29 6.90 6.11
Table 1 Number of plant materials used in free amino acid content analysis.
Table 2 HPLC conditions for the analysis of free amino acid.
Table 3 Protein contents of 134 lines used in free amino acids analysis.
Table 4 Content of essential amino acids among leading valuable lines used in the analysis.
Table 5 Ratio of essential amino acids to total amino acid content among leading valuable lines used in the analysis.
Table 6 Correlation coefficient of essential amino acids and protein content.

Significance level: *P < 0.05, **P < 0.01, ***P < 0.001.

Table 7 Amino acids contents and ratio of lysine among floury lines ‘Milyang320’.
Table 8 Amino acids contents of ‘Milyang320’ cultivated in 5 different regions.