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Research Article

Analysis of Qualitative and Quantitative Traits to Identify Different Chinese Jujube Cultivars

Plant Breeding and Biotechnology 2019;7(3):175-185.
Published online: September 1, 2019

Division of Forest Special Products, National Institute of Forest Science, Suwon 16631, Korea

*Jae-Ik Nam, minesilhouette@gmail.com, Tel: +82-31-290-1099, Fax: +82-31-290-1050
• Received: April 24, 2019   • Revised: May 20, 2019   • Accepted: May 27, 2019

Copyright © 2019 The Korean Society of Breeding Science

This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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  • The Application of Machine Learning for Cultivar Discrimination of Sweet Cherry Endocarp
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Analysis of Qualitative and Quantitative Traits to Identify Different Chinese Jujube Cultivars
Plant Breed. Biotech.. 2019;7(3):175-185.   Published online September 1, 2019
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Analysis of Qualitative and Quantitative Traits to Identify Different Chinese Jujube Cultivars
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Analysis of Qualitative and Quantitative Traits to Identify Different Chinese Jujube Cultivars
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Fig. 1 Morphological variability of fruits in various jujube cultivars.
Fig. 2 Scattered diagram of 25 jujube cultivars based on the principal component 1 and 2 variables for 15 morphological characteristics. Major cultivated jujube cultivars in Korea were grouped with two Chinese cultivars in the red circle. 2 Chinese jujube cultivars in the green circle were commonly known as apple jujube. The blue circle, related species Sour jujube was completely separated from cultivated jujube cultivars.
Fig. 3 Dendrogram for cluster analysis of 25 jujube cultivars based on quantitative morphological data.
Analysis of Qualitative and Quantitative Traits to Identify Different Chinese Jujube Cultivars

Cultivars name and their source used in this study.

No. Common name Source Codez) No. Common name Source Code
1 Bokjo Korea KV1 14 Jinsixiaozao China C14
2 Mudeung Korea K2 15 Zhongyangmuzao China C15
3 Wolchul Korea K3 16 Sandonglizao China C16
4 Geumseong Korea K4 17 Xiaolizao China C17
5 Boeundaechu Korea KV5 18 Dongzao China C18
6 Dalizao China C6 19 Jinsi No. 3 China C19
7 Huizao China C7 20 Jinsi No. 4 China C20
8 Pozao China C8 21 Yuanling No. 1 China C21
9 Panzao China C9 22 Yuanling No. 2 China C22
10 Zanhuangdazao China C10 23 Chuncheon 7 Korea KV23
11 Dabailing China C11 24 Sour jujube 1 China RS24
12 Damaya China C12 25 Sour jujube 2 China RS25
13 Daguazao China C13

z)Cultivar codes are abbreviations for the sample characteristics.

K: Korean cultivar, C: Chinese cultivar, KV: Korean native variety, RS: Related species.

List of 10 qualitative characteristics of jujube cultivars for phenetic analysis in this study.

No. Trait Abbreviation Unit
1 Growth Bud burst time BBT Code (3-early; 5-mid; 7-late)
2 Flowering time FLT Code (3-early; 5-mid; 7-late)
3 Fructification time FRT Code (3-early; 5-mid; 7-late)
4 Spikes form SF Code (1-present; 2-absent)
5 Leaf Leaf color (upper side) LCU RHS Color Chart group and codez)
6 Leaf color (lower side) LCL RHS Color Chart group and code
7 Leaf shape LS Code (3-elliptical; 5-ovalness; 7-oblong)
8 Serra shape SS Code (1-entire; 3-serrate; 5-biserrate)
9 Fruit Fruit shape FS Code (1-round; 2-round oblate; 3-ovalness; 4-oblong; 5-elliptical)
10 Stone Stone shape STS Code (3-round; 5-ovate; 7-fusiform)

z)Royal Horticultural Society Color Chart group and code.

List of 15 quantitative characteristics of jujube cultivars for phenetic analysis in this study.

No. Trait Abbreviation Unit
1 Leaf Leaf length LL mm
2 Leaf width LW mm
3 Petiole length PL mm
4 Leaf area LA cm2
5 Terminal leaf length TLL mm
6 Terminal leaf width TLW mm
7 Terminal petiole length TPL mm
8 Terminal leaf area TLA cm2
9 Fruit Fruit length FL mm
10 Fruit width FWI mm
11 Flesh index of fruitz) FIF g
12 Fruit weight FWE g
13 Seed Stone length SL mm
14 Stone width SWI mm
15 Stone weight SWE g

z)Flesh index of fruit was estimated by subtracting stone weight from fruit weight.

Representative characteristics of 25 jujube cultivars in the related qualitative traits.

Cultivar
code
Traitz)

BBT FLT FRT SF LCU LCL LS SS FS STS
KV1 5 5 7 0 Green 137Ay) Green 138A 3 2 4 7
K2 5 5 7 0 Green 139A Green 147B 5 2 4 7
K3 5 5 7 0 Green 137A Green 147B 5 2 4 7
K4 5 5 7 0 Green 137B Green 147B 5 2 4 7
KV5 5 5 5 0 Green 137A Green 147B 5 2 3 5
C6 7 7 7 0 Green 137A Green 147B 7 2 3 5
C7 5 5 5 1 Green 139B Green 137C 7 2 4 7
C8 5 5 3 0 Green 137A Green 147B 3 2 3 7
C9 5 5 5 1 Green 137A Green 138A 3 2 4 7
C10 3 3 5 0 Green 137A Green 147B 5 2 4 5
C11 3 5 5 0 Green 139B Green 138A 5 2 5 5
C12 5 5 5 0 Green 137A Green 147B 5 2 2 7
C13 5 5 3 0 Green 137A Green 147B 3 2 5 5
C14 5 5 5 1 Green 137A Green 147B 3 2 3 7
C15 3 3 5 0 Green 137A Green 138A 3 2 3 7
C16 7 7 7 1 Green 137A Green 147B 3 2 3 7
C17 5 7 7 1 Green 137A Green 147B 3 2 4 7
C18 5 7 7 0 Green 137A Green 147B 3 2 5 7
C19 5 5 5 0 Green 137B Green 147B 3 2 3 7
C20 5 3 5 1 Green 137A Green 138A 3 2 3 7
C21 5 5 5 0 Green 137A Green 137C 3 2 4 7
C22 7 5 5 0 Green 139B Green 137C 3 2 5 7
KV23 5 3 5 0 Green 137A Green 137C 3 2 4 7
RS24 3 3 3 1 Green 137B Green 147B 3 2 4 7
RS25 3 3 3 1 Green 137B Green 147B 7 2 3 5

z)For an explanation of variable symbols, see Table 2.

y)Abbreviation of RHS Color Chart group and code.

Mean values of leaf related quantitative characteristics in 25 jujube cultivars.

Cultivar
code
Traitz)

LL LW PL LA TLL TLW TPL TLA
KV1 66.03bcy) 35.18b 7.16b 16.84c 50.40bc 24.72b 4.49cd 10.41b
±6.58 ±5.63 ±1.37 ±2.56 ±5.63 ±3.08 ±0.71 ±2.16
K2 62.16de 30.51d 6.11cde 16.76c 50.57bc 22.79c 5.28a 9.10c
±5.02 ±4.29 ±0.96 ±2.84 ±5.70 ±4.13 ±0.87 ±1.37
K3 66.08bc 35.60b 6.37bcd 18.38b 52.57ab 27.31a 4.52cd 10.87b
±5.89 ±3.52 ±0.48 ±3.25 ±5.44 ±2.63 ±0.48 ±2.14
K4 68.62ab 38.28a 6.88bc 22.42a 53.95a 27.77a 5.01a 12.11a
±7.53 ±3.64 ±1.05 ±3.94 ±5.51 ±3.52 ±1.04 ±1.68
KV5 54.68gh 29.61d 5.38ef 12.97fg 38.61hi 20.18fgh 3.52hijk 7.00fgh
±4.85 ±3.06 ±1.72 ±1.83 ±5.30 ±2.52 ±1.24 ±1.41
C6 56.98fgh 23.68jk 8.57a 10.33jk 33.77l 14.20k 3.19kl 5.12jkl
±6.88 ±2.96 ±1.39 ±1.71 ±6.13 ±1.95 ±0.71 ±0.33
C7 50.63ij 22.25k 5.72def 9.12l 33.96kl 14.01k 4.23def 4.69l
±4.95 ±1.13 ±0.54 ±1.02 ±2.52 ±2.26 ±0.35 ±0.62
C8 57.52fg 28.70def 5.44def 11.93ghi 44.93de 21.14def 4.26de 6.65ghi
±2.16 ±2.16 ±0.65 ±0.95 ±4.13 ±0.87 ±0.66 ±0.55
C9 63.79cd 33.22c 5.74def 15.56d 49.69c 22.32cd 3.77ghij 7.69e
±4.08 ±3.04 ±1.87 ±1.66 ±3.87 ±2.98 ±0.62 ±1.32
C10 65.19c 34.28bc 4.98f 16.61c 42.75efg 25.75b 3.42jkl 8.27d
±5.45 ±3.02 ±1.15 ±3.07 ±4.10 ±2.08 ±0.52 ±0.92
C11 59.68ef 30.14d 6.69bc 12.29gh 41.63fg 19.04h 4.40cde 6.17i
±5.24 ±1.79 ±0.70 ±1.48 ±1.79 ±1.09 ±0.31 ±0.41
C12 70.29a 25.90ghj 8.26a 14.65de 46.30d 15.60j 4.71bc 5.00jkl
±3.23 ±2.78 ±1.12 ±1.48 ±3.40 ±0.70 ±0.77 ±0.54
C13 57.20fgh 26.82gh 6.77bc 14.08e 35.40jkl 15.99ij 3.53hijk 5.29jkl
±2.93 ±1.43 ±1.08 ±1.63 ±3.73 ±1.56 ±0.34 ±0.60
C14 53.96h 29.25d 5.30ef 11.29hij 40.45gh 21.61cde 4.07efg 4.82kl
±7.11 ±3.17 ±1.39 ±1.86 ±4.15 ±3.16 ±0.86 ±0.82
C15 56.04gh 24.52ij 6.09cde 11.40hij 42.62efg 17.023i 3.73ghij 6.22i
±5.86 ±1.44 ±1.19 ±1.40 ±5.15 ±1.653 ±0.71 ±0.45
C16 47.95ijk 24.48ij 3.05i 12.41gh 42.03fg 20.18fgh 2.19m 7.05fgh
±7.18 ±4.10 ±0.52 ±2.93 ±3.35 ±3.51 ±0.30 ±1.52
C17 54.14h 28.97de 3.85hi 10.72j 43.67ef 22.55c 3.22kl 7.20efg
±7.86 ±4.41 ±0.75 ±1.43 ±5.86 ±3.43 ±0.41 ±1.25
C18 46.49k 22.78jk 3.84hi 12.77g 36.48ijk 15.72ij 3.13l 6.57hi
±9.00 ±5.22 ±0.70 ±1.87 ±5.90 ±2.91 ±0.65 ±0.83
C19 69.30a 32.73c 6.84bc 19.02b 52.13abc 20.62efg 4.60cd 8.35d
±4.51 ±1.65 ±0.73 ±1.30 ±4.24 ±1.48 ±0.63 ±1.07
C20 47.75jk 23.81jk 3.98gh 8.52l 38.18hi 16.84ij 3.12l 5.45jk
±4.66 ±2.12 ±0.23 ±0.79 ±2.80 ±1.82 ±0.20 ±0.30
C21 49.82ij 29.20d 4.81fg 10.73j 36.19jkl 19.65gh 3.84ghi 5.32jkl
±4.81 ±2.14 ±0.67 ±1.23 ±1.52 ±1.31 ±0.61 ±0.75
C22 51.01i 27.44efg 4.92f 11.13hij 40.35gh 20.21fgh 3.48ijk 5.52j
±3.46 ±1.73 ±0.27 ±1.11 ±4.77 ±1.01 ±0.62 ±0.76
KV23 55.69gh 27.10fgh 4.94f 13.88ef 40.40gh 20.32efgh 3.88fgh 7.48ef
±7.87 ±4.84 ±1.31 ±2.88 ±9.28 ±1.73 ±0.97 ±1.46
RS24 56.38gh 25.59hi 4.90f 9.54kl 37.28ij 16.48ij 3.82ghi 4.95jkl
±2.62 ±1.58 ±0.82 ±0.99 ±4.40 ±1.74 ±0.42 ±0.77
RS25 37.06l 18.88l 3.96gh 5.70m 26.51m 12.48l 2.24m 2.97m
±3.77 ±2.21 ±1.09 ±1.20 ±3.74 ±0.79 ±0.50 ±0.69
Meanx) 57.87 28.89 5.73 13.64 42.91 20.24 3.89 7.06
±9.18 ±5.40 ±2.13 ±3.95 ±7.70 ±4.51 ±0.97 ±2.29

z)For an explanation of variable symbols, see Table 3.

y)Mean separation within columns by Duncan’s multiple range test at the 0.05 probability level.

x)The Mean value of 23 Z. jujuba Mill. without two Z. acidojujuba (RS24 and RS25).

Mean values of fruit and seed related quantitative characteristics in 25 jujube cultivars.

Cultivar
code
Traitz)

FL FWI FIF FWE SL SWI SWE
KV1 37.28cdey) 27.11de 12.11ef 12.59fg 21.66cde 7.49ghij 0.48k
±2.41 ±2.27 ±2.79 ±2.81 ±1.46 ±0.76 ±0.09
K2 37.71bcd 26.68de 11.22fg 11.84gh 23.86a 8.59de 0.62efg
±2.46 ±2.44 ±2.15 ±2.15 ±2.39 ±0.59 ±0.06
K3 35.31gh 26.35ef 10.56fghi 11.11ghi 22.13bcde 7.63ghijk 0.56ghij
±4.04 ±2.17 ±2.50 ±2.49 ±2.17 ±0.79 ±0.10
K4 37.84bc 26.58de 11.82ef 12.37fg 22.66bc 7.61ghijk 0.55hij
±3.61 ±2.42 ±3.05 ±3.02 ±2.16 ±0.69 ±0.11
KV5 31.00j 25.34fg 9.95ghi 10.52hij 19.17hi 8.58de 0.57fghi
±2.95 ±2.55 ±3.42 ±3.42 ±1.43 ±0.59 ±0.12
C6 35.63fgh 30.77c 14.56d 15.28d 22.07bcde 9.30c 0.71d
±4.21 ±2.22 ±2.89 ±2.87 ±2.89 ±0.77 ±0.12
C7 29.77jk 20.78j 5.82k 6.28k 19.46hi 7.25k 0.46k
±2.87 ±1.59 ±1.66 ±1.66 ±1.45 ±0.34 ±0.02
C8 35.12gh 26.32ef 9.41hij 9.88ij 19.01i 7.17k 0.46k
±2.62 ±1.62 ±1.75 ±1.82 ±2.15 ±0.705 ±0.07
C9 36.27efg 27.21de 11.09fg 11.64gh 21.23ef 7.85ghij 0.55hij
±2.53 ±3.83 ±3.03 ±3.07 ±2.01 ±0.94 ±0.13
C10 33.43i 27.82d 10.99fgh 11.53gh 19.83ghi 7.88ghi 0.55hij
±1.65 ±1.57 ±1.78 ±1.77 ±0.85 ±0.59 ±0.07
C11 38.80b 37.17a 22.02b 23.21b 22.46bcd 11.06b 1.19a
±3.90 ±3.66 ±6.79 ±6.85 ±1.94 ±1.57 ±0.28
C12 34.45hi 25.00g 8.32j 8.94j 22.54bcd 8.32ef 0.62efg
±2.19 ±1.38 ±1.45 ±1.49 ±1.14 ±0.38 ±0.05
C13 40.52a 37.16a 26.85a 27.87a 21.61de 10.70b 1.02c
±2.73 ±3.86 ±6.83 ±6.84 ±1.85 ±1.41 ±0.23
C14 35.22gh 27.06de 11.91ef 12.41fg 19.97ghi 7.51hijk 0.50jk
±1.94 ±1.74 ±1.92 ±1.93 ±0.95 ±0.41 ±0.05
C15 35.34gh 23.61h 10.69fghi 11.30ghi 22.70bcde 8.58de 0.63ef
±2.08 ±2.26 ±0.54 ±0.49 ±0.99 ±0.81 ±0.15
C16 36.16efg 27.48de 13.08de 13.75ef 20.61fg 9.03cd 0.67de
±2.29 ±2.51 ±3.23 ±3.35 ±3.00 ±1.28 ±0.21
C17 33.52i 24.79g 9.98ghi 10.49hij 20.09gh 7.51hijk 0.51ijk
±2.25 ±2.14 ±2.22 ±2.24 ±1.24 ±0.62 ±0.07
C18 35.86efgh 32.91b 16.41c 17.50c 22.18bcde 13.08a 1.09b
±2.95 ±2.52 ±3.12 ±3.13 ±1.12 ±0.39 ±0.14
C19 28.134 21.95i 6.60k 7.10k 16.50j 7.40jk 0.50jk
±2.60 ±1.96 ±1.74 ±1.74 ±2.09 ±0.23 ±0.07
C20 28.54kl 21.98i 6.83k 7.12k 16.87j 6.368 0.290
±1.59 ±1.24 ±0.87 ±0.87 ±0.79 ±0.16 ±0.02
C21 36.16efg 24.21gh 9.16ij 9.72ij 21.23ef 7.92fgh 0.56ghij
±1.99 ±0.55 ±1.32 ±1.30 ±1.99 ±0.32 ±0.08
C22 34.55hi 31.17c 14.09d 14.71de 20.09gh 8.68de 0.62efg
±2.35 ±1.10 ±2.11 ±2.08 ±1.52 ±0.24 ±0.10
KV23 37.09cdef 25.31fg 11.28fg 11.83gh 24.58a 7.43ijk 0.55ghij
±2.67 ±0.48 ±1.26 ±1.26 ±1.31 ±0.64 ±0.06
RS24 26.33m 20.36j 4.239 4.826 19.45hi 8.67de 0.59fgh
±1.35 ±0.23 ±0.41 ±0.43 ±1.14 ±0.66 ±0.04
RS25 13.37n 11.83k 0.63m 1.07m 9.39k 8.01fg 0.44k
±0.78 ±0.82 ±0.16 ±0.19 ±1.06 ±1.28 ±0.10
Meanx) 34.93 27.09 11.89 12.50 20.96 8.33 0.61
±4.05 ±4.68 ±5.43 ±5.59 ±2.63 ±1.55 ±0.23

z)For an explanation of variable symbols, see Table 3.

y)Mean separation within columns by Duncan’s multiple range test at the 0.05 probability level.

x)The Mean value of 23 Z. jujuba Mill. without two Z. acidojujuba (RS24 and RS25).

Principal component analysis based on 15 quantitative characteristics for 25 jujube cultivars.

Principal Total Eigenvalue Variance % Accumulate %
PC1 5.755 38.367 38.367
PC2 3.936 26.238 64.605
PC3 1.284 8.558 73.163

Eigenvectors associated with the eigenvalues obtained from principal component analysis for 15 quantitative characteristics on 25 jujube cultivars.

Characteristics PC1 PC2 PC3
Leaf length 0.079 0.612 0.627
Leaf width 0.054 0.786 0.267
Petiole length 0.127 0.041 0.865
Leaf area 0.161 0.759 0.282
Terminal leaf length −0.006 0.816 0.266
Terminal leaf width 0.007 0.898 −0.091
Terminal leaf petiole length 0.023 0.464 0.621
Terminal leaf area 0.053 0.845 0.038
Fruit length 0.732z) 0.460 0.018
Fruit width 0.903 0.189 0.038
Flesh index of fruit 0.933 0.087 −0.023
Fruit weight 0.940 0.077 −0.017
Stone length 0.572 0.357 0.183
Stone width 0.716 −0.334 0.120
Stone weight 0.794 −0.206 0.149

z)Values in bold indicate the most relevant characters (> 0.4) that contributed most to the variation of the particular component.

Table 1 Cultivars name and their source used in this study.

Cultivar codes are abbreviations for the sample characteristics.

K: Korean cultivar, C: Chinese cultivar, KV: Korean native variety, RS: Related species.

Table 2 List of 10 qualitative characteristics of jujube cultivars for phenetic analysis in this study.

Royal Horticultural Society Color Chart group and code.

Table 3 List of 15 quantitative characteristics of jujube cultivars for phenetic analysis in this study.

Flesh index of fruit was estimated by subtracting stone weight from fruit weight.

Table 4 Representative characteristics of 25 jujube cultivars in the related qualitative traits.

For an explanation of variable symbols, see Table 2.

Abbreviation of RHS Color Chart group and code.

Table 5 Mean values of leaf related quantitative characteristics in 25 jujube cultivars.

For an explanation of variable symbols, see Table 3.

Mean separation within columns by Duncan’s multiple range test at the 0.05 probability level.

The Mean value of 23 Z. jujuba Mill. without two Z. acidojujuba (RS24 and RS25).

Table 6 Mean values of fruit and seed related quantitative characteristics in 25 jujube cultivars.

For an explanation of variable symbols, see Table 3.

Mean separation within columns by Duncan’s multiple range test at the 0.05 probability level.

The Mean value of 23 Z. jujuba Mill. without two Z. acidojujuba (RS24 and RS25).

Table 7 Principal component analysis based on 15 quantitative characteristics for 25 jujube cultivars.
Table 8 Eigenvectors associated with the eigenvalues obtained from principal component analysis for 15 quantitative characteristics on 25 jujube cultivars.

Values in bold indicate the most relevant characters (> 0.4) that contributed most to the variation of the particular component.