Skip to main navigation Skip to main content
  • KSBS
  • E-Submission

Plant Breed. Biotech. : Plant Breeding and Biotechnology

OPEN ACCESS
ABOUT
BROWSE ARTICLES
EDITORIAL POLICIES
FOR CONTRIBUTORS

Page Path

10
results for

"Kwon-Kyoo Kang"

Article category

Keywords

Publication year

Authors

"Kwon-Kyoo Kang"

Research Article

Low-Affinity Cation Transporter 1 Improves Salt Stress Tolerance in Japonica Rice
Marjohn C. Niño, Franz Marielle Nogoy, Kwon-Kyoo Kang, Yong-Gu Cho
Plant Breed. Biotech. 2018;6(1):82-93.   Published online March 1, 2018
DOI: https://doi.org/10.9787/PBB.2018.6.1.82

Plants adapt to hostile environmental condition through specialized cellular processes which require coordinated regulation of multiple transport mechanisms. Low-affinity cation transporter (LCT) 1 is a membrane transporter gene exclusive only to members of the grass family, and the rice genome contained only one copy of the gene. Accumulating evidence highlighted the important role of this gene in the regulation of various cations transport into the plant cells including heavy metals. To further characterize the role of this membrane transporter in planta, we overexpressed the OsLCT1 in japonica rice using CaMV 35S and screened the transgenic plants for high salt toxicity at the seedling stage. A striking difference in the phenotype of OsLCT1-overexpression plants and the wild-type was observed at seven days after treatment, where transgenic plants exhibited moderate tolerance reaction to salinity stress. Our findings suggest that OsLCT1 gene can be useful to develop new resistant varieties against salinity stress.

Citations

Citations to this article as recorded by  
  • Comprehensive Approaches to Mitigating Heavy Metals and Metalloids Contamination: Plant Mechanisms, Biotechnological Advances, and Strategic Interventions
    Ibrahim Khan, Sajjad Asaf, Lubna, Sang-Mo Kang, In-Jung Lee
    Water, Air, & Soil Pollution.2026;[Epub]     CrossRef
  • Plant transporters: roles in stress responses and effects on growth and development
    Ping Li, Ting Luo, Xiaojun Pu, Ying Zhou, Jianing Yu, Li Liu
    Plant Growth Regulation.2021; 93(3): 253.     CrossRef
  • Genome-wide identification and molecular characterization of cysteine protease genes in rice
    Marjohn C. Niño, Me-Sun Kim, Kwon Kyoo Kang, Yong-Gu Cho
    Plant Biotechnology Reports.2020; 14(1): 69.     CrossRef
  • Functional Analysis of Starch Metabolism in Plants
    Yong-Gu Cho, Kwon-Kyoo Kang
    Plants.2020; 9(9): 1152.     CrossRef
  • 6 View
  • 0 Download
  • 4 Crossref

Review Articles

Current Applicable DNA Markers for Marker Assisted Breeding in Abiotic and Biotic Stress Tolerance in Rice (Oryza sativa L.)
Franz Marielle Nogoy, Jae-Young Song, Sothea Ouk, Shadi Rahimi, Soon Wook Kwon, Kwon-Kyoo Kang, Yong-Gu Cho
Plant Breed. Biotech. 2016;4(3):271-284.   Published online August 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.3.271

Abiotic and biotic stresses adversely affect rice (Oryza sativa L.) growth and yield. Conventional breeding is a very effective method to develop tolerant rice variety; however, it takes a decade long to establish a new rice variety. DNA-based markers have a huge potential to improve the efficiency and precision of conventional plant breeding via marker-assisted selection (MAS). The large number of quantitative trait loci (QTLs) mapping studies for rice has provided an abundance of DNA marker-trait associations. The limitations of conventional breeding such as linkage drag and lengthy time consumption can be overcome by utilizing DNA markers in plant breeding. The major applications of DNA markers such as MAS, QTL mapping and gene pyramiding have been surveyed. In this review, we presented the latest markers available for some of the most important abiotic and biotic stresses in rice breeding programs. Achieving a significant impact on crop improvement by marker assisted breeding (MAB) represents the great challenge for agricultural scientists in the next few decades.

Citations

Citations to this article as recorded by  
  • Efficiency of doubled haploid technology in mining of multiple BB resistance genes from indica rice hybrid
    Sudhansu Sekhar Bhuyan, Byomkesh Dash, Prachitara Rout, Nupur Naik, Manjusha Chandravani, Nibedita Swain, Ram Lakhan Verma, Jawahar Lal Katara, Arup Kumar Mukherjee, C. Parameswaran, BN. Devanna, Snigdha Samir Pattnaik, Sanghamitra Samantaray
    Cereal Research Communications.2025; 53(3): 1319.     CrossRef
  • The Development of Multi-Resistant Rice Restorer Lines and Hybrid Varieties by Pyramiding Resistance Genes against Blast and Brown Planthopper
    Zhao Deng, Peng Qin, Kaiyu Liu, Nan Jiang, Tianze Yan, Xuanwen Zhang, Chenjian Fu, Guangcun He, Kai Wang, Yuanzhu Yang
    Agronomy.2024; 14(5): 878.     CrossRef
  • Emerging Trends in Wheat (Triticum spp.) Breeding: Implications for the Future
    Mujahid Alam, P. Stephen Baenziger, Katherine Frels
    Frontiers in Bioscience-Elite.2024;[Epub]     CrossRef
  • Genomics and transcriptomics to protect rice (Oryza sativa. L.) from abiotic stressors: -pathways to achieving zero hunger
    Mushtaq Ahmad
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Advances from Conventional to Modern Plant Breeding Methodologies
    Sashi Lamichhane, Sapana Thapa
    Plant Breeding and Biotechnology.2022; 10(1): 1.     CrossRef
  • Review on harnessing biotechnological tools for the development of stable bacterial wilt resistant solanaceous vegetable crops
    Shweta Sharma, Viveka Katoch, Devinder Kumar Banyal
    Scientia Horticulturae.2021; 285: 110158.     CrossRef
  • Genotyping for Blast (Pyricularia oryzae) Resistance Genes in F2 Population of Supa Aromatic Rice (Oryza sativa L.)
    L. Kanyange, J. Kamau, O. Ombori, A. Ndayiragije, M. Muthini
    International Journal of Genomics.2019; 2019: 1.     CrossRef
  • Breeding Hybrid Rice with Genes Resistant to Diseases and Insects Using Marker-Assisted Selection and Evaluation of Biological Assay
    Me-Sun Kim, Sothea Ouk, Kuk-Hyun Jung, Yoohan Song, Le Van Trang, Ju-Young Yang, Yong-Gu Cho
    Plant Breeding and Biotechnology.2019; 7(3): 272.     CrossRef
  • Insight into MAS: A Molecular Tool for Development of Stress Resistant and Quality of Rice through Gene Stacking
    Gitishree Das, Jayanta Kumar Patra, Kwang-Hyun Baek
    Frontiers in Plant Science.2017;[Epub]     CrossRef
  • Application and utilization of marker assisted selection for biotic stress resistance in hybrid rice (Oryza sativaL.)
    Jae-Young Song, Sothea Ouk, Franz Marielle Nogoy, Marjohn C. Niño, Soon Wook Kwon, Woongoo Ha, Kwon-Kyoo Kang, Yong-Gu Cho
    Journal of Plant Biotechnology.2016; 43(3): 317.     CrossRef
  • 13 View
  • 0 Download
  • 10 Crossref
Modification of Fatty Acid Profiles of Rapeseed (Brassica napus L.) Oil for Using as Food, Industrial Feed-Stock and Biodiesel
Ujjal Kumar Nath, Hoy-Taek Kim, Khadiza Khatun, Jong-In Park, Kwon-Kyoo Kang, Ill-Sup Nou
Plant Breed. Biotech. 2016;4(2):123-134.   Published online May 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.2.123

Rapeseed is a member of family Brassicaceae, cultivated as oil crop. Rapeseed oil is being utilized from early civilization, but its popularity being declined from the mid-nineteenth century due to presence of erucic acid (C22:1) and glucosinolates. Thereby, several attempts have been made to develop cultivars free from those toxins. In the past 20 years, breeders got success in developing ‘00’-quality rapeseed, known as ‘Canola’. The target mutagenesis of fae-1 and fae-2 of Brassica napus ensured such success. Thereafter, ‘canola’ regains its market as a healthy vegetable oil. Moreover, high oleic acid rapeseed lines, with 86% oleic acid, have been developed by using chemical mutagenesis of FAD2 alleles responsible for desaturation of oleic acid (C18:1) to linoleic acid (C18:2). Recently, high erucic acid rapeseed oil regained interest for biodegradable plastic, cosmetic, emollient industries and for biodiesel. Therefore, breeding approaches have been pursued; unfortunately, that were failed to reach erucic acid level beyond 50% in seed-oil. Rapeseed genotypes over-expressed with Ld-LPAAT separately and Ld-LPAAT-FAE chimaric construct together were tried but failed to reach the erucic acid content more than 60%. Thereof, combined effort of conventional breeding and transgenic approaches are brought together to overcome three hypothesized bottlenecks; reviewed in this article, which restricted erucic acid level near to 60%. Finally, rapeseed genotypes with 78% erucic acid were developed successfully. This material is now available in Germany for using in emollient industries and for biodiesel. Therefore, this article is reviewed on the current status and future outlook for modification of fatty acid profiles of rapeseed oil for its end-use as food, industrial feed-stock and biodiesel.

Citations

Citations to this article as recorded by  
  • Optimization of biodiesel synthesis using ultrasound and mechanical stirring methods: a comparative study
    Sk Mosaraf Ahammed, Amit Kumar Roy, Xue-Zhi Li, Fahad Al Basir, Priti Kumar Roy
    Frontiers in Applied Mathematics and Statistics.2026;[Epub]     CrossRef
  • Assessment of performance and estimation of variability in rapeseed (Brassica nappus L.) genotypes
    Mohammed Abu, Birhanu Mengistu, Tilahun Mola, Misteru Tesfaye, Yared Semahegn, Fekadu Amsalu
    Discover Agriculture.2026;[Epub]     CrossRef
  • Development and characterization of new high yielding mustard cultivar suitable for crop rotation due to earliness
    Khalid Mahmood, Abdul Majid Khan, Wajiha Anum, Abid Ali, Rana Tauqeer Ahmad, Rana Imtiaz Ahmed, Imran Akhtar, Nadia Manzoor, Asad- ur- Rehman Ch., Naeem Arshad Maan, Noorah AlKubaisi, Mohamed S. Elshikh, Rashid Iqbal, Umair Riaz, Gang Deng, Saltanat Aghay
    Genetic Resources and Crop Evolution.2025; 72(7): 8699.     CrossRef
  • Screening of Pod Shatter Resistance and Analysis of Correlations with Agronomic Traits in Rapeseed (Brassica napus L.)
    Jaehee Jeong, Da-Hee An, Hyun-Min Cho, Young-Lok Cha, Ji-Bong Choi, Dong-Sung Kim, Soo-Yeon Kim
    Korean Journal of Breeding Science.2025; 57(2): 55.     CrossRef
  • New breeding material of winter rapeseed (Brassica napus L.) with increased yield and high oleic acid content in seed oil
    A. A. Golova, L. A. Gorlova, S. G. Efimenko
    Proceedings on applied botany, genetics and breeding.2025; 186(2): 121.     CrossRef
  • Genotyping-by-Sequencing Analysis Reveals Associations between Agronomic and Oil Traits in Gamma Ray-Derived Mutant Rapeseed (Brassica napus L.)
    Woon Ji Kim, Baul Yang, Dong-Gun Kim, Sang Hoon Kim, Ye-Jin Lee, Juyoung Kim, So Hyeon Baek, Si-Yong Kang, Joon-Woo Ahn, Yu-Jin Choi, Chang-Hyu Bae, Kanivalan Iwar, Seong-Hoon Kim, Jaihyunk Ryu
    Plants.2024; 13(11): 1576.     CrossRef
  • Foliar spray can improve rapeseed yield components under continuous irrigation
    Nooshin Kheshtpaz, Mohsen Janmohammadi, Naser Sabaghnia
    Pesquisa Agropecuária Tropical.2024;[Epub]     CrossRef
  • Combining ability and heterosis of spring oilseed rape genotypes under normal irrigation and drought stress conditions
    Parvaneh Gholizadeh Sarcheshmeh, Jalal Saba, Hasan Amiri Oghan, Farid Shekari, Amir Gholizadeh
    Journal of Crop Breeding.2024; 16(49): 74.     CrossRef
  • HO-CR and HOLL-CR: new forms of winter oilseed rape (Brassica napus L.) with altered fatty acid composition and resistance to selected pathotypes of Plasmodiophora brassicae (clubroot)
    Stanisław Spasibionek, Katarzyna Mikołajczyk, Marcin Matuszczak, Joanna Kaczmarek, Noor Ramzi, Małgorzata Jędryczka
    Journal of Applied Genetics.2024; 65(3): 439.     CrossRef
  • Contrasting Nitrogen Fertilization andBrassica napus(Canola) Variety Development Impact Recruitment of the Root-Associated Microbiome
    Yunliang Li, Sally L. Vail, Melissa M. Arcand, Bobbi L. Helgason
    Phytobiomes Journal.2023; 7(1): 125.     CrossRef
  • Biochemical changes of kemiri sunan [Reutealis trisperma (Blanco) Airy Shaw] kernels at eight levels of fruit storage duration
    S Virgian, A Aunillah, D Listyati, M Herman, D Pranowo, E Wardiana
    IOP Conference Series: Earth and Environmental Science.2022; 974(1): 012124.     CrossRef
  • Assessment of oil quality traits in some important exotic and indigenous collections of Brassica species
    Nisha Kumari, Ram Avtar, Vivek K. Singh, Neeraj Kumar, Mahavir Bishnoi, Manjeet Singh, Rajeev Varshney
    Crop & Pasture Science.2022; 73(12): 1385.     CrossRef
  • Fatty acid composition of oil crops: genetics and genetic engineering
    E. A. Porokhovinova, T. V. Matveeva, G. V. Khafizova, V. D. Bemova, A. G. Doubovskaya, N. V. Kishlyan, L. P. Podolnaya, V. A. Gavrilova
    Genetic Resources and Crop Evolution.2022; 69(6): 2029.     CrossRef
  • Study on the inheritance of oleic acid content in reciprocal F1 hybrids of winter rapeseed at V.S. Pustovoit All-Russian Research Institute of Oil Crops
    A A Golova, L A Gorlova
    IOP Conference Series: Earth and Environmental Science.2022; 979(1): 012005.     CrossRef
  • Emerging technologies for biodiesel production: Processes, challenges, and opportunities
    Arman Amani Babadi, Shahrooz Rahmati, Rafieh Fakhlaei, Bahram Barati, Shuang Wang, William Doherty, Kostya (Ken) Ostrikov
    Biomass and Bioenergy.2022; 163: 106521.     CrossRef
  • What about greener phase change materials? A review on biobased phase change materials for thermal energy storage applications
    Otu Okogeri, Vassilis N. Stathopoulos
    International Journal of Thermofluids.2021; 10: 100081.     CrossRef
  • Single Nucleotide Polymorphism (SNP) Discovery and Association Study of Flowering Times, Crude Fat and Fatty Acid Composition in Rapeseed (Brassica napus L.) Mutant Lines Using Genotyping-by-Sequencing (GBS)
    Jaihyunk Ryu, Jae Il Lyu, Dong-Gun Kim, Kwang Min Koo, Baul Yang, Yeong Deuk Jo, Sang Hoon Kim, Soon-Jae Kwon, Bo-Keun Ha, Si-Yong Kang, Jin-Baek Kim, Joon-Woo Ahn
    Agronomy.2021; 11(3): 508.     CrossRef
  • СТВОРЕННЯ ТРАНСГЕННИХ РОСЛИН ДЛЯ ВИРОБНИЦТВА ОЛІЙ З ВАЖЛИВИМИ ФІЗИКО-ХІМІЧНИМИ ВЛАСТИВОСТЯМИ
    Д. С. Тимчук, Г. С. Потапенко
    Біорізноманіття, екологія та експериментальна біологія.2021; 23(1): 82.     CrossRef
  • The diversity of fatty acid composition in traditional and rare oil crops cultivated in Russia
    Vera Gavrilova, Tatyana Shelenga, Elizaveta Porokhovinova, Aleksandra Dubovskaya, Nina Kon’kova, Sergey Grigoryev, Larisa Podolnaya, Aleksey Konarev, Tamara Yakusheva, Natalya Kishlyan, Andrey Pavlov, Nina Brutch
    Biological Communications.2020;[Epub]     CrossRef
  • Plant-Derived Nutraceuticals and Immune System Modulation: An Evidence-Based Overview
    Antonella Di Sotto, Annabella Vitalone, Silvia Di Giacomo
    Vaccines.2020; 8(3): 468.     CrossRef
  • A GC-MS Characteristic Analysis of Hybrirock and Pactol Seeds Harvested in Erbil/Iraq
    Ahmed A. AbdulJabbar, Bahar J. Mahmood, Sirwan T. Salih
    Al-Mustansiriyah Journal of Science.2020; 31(3): 65.     CrossRef
  • Marker assisted selection of new high oleic and low linolenic winter oilseed rape (Brassica napus L.) inbred lines revealing good agricultural value
    Stanisław Spasibionek, Katarzyna Mikołajczyk, Hanna Ćwiek–Kupczyńska, Teresa Piętka, Krystyna Krótka, Marcin Matuszczak, Joanna Nowakowska, Krzysztof Michalski, Iwona Bartkowiak-Broda, Maoteng Li
    PLOS ONE.2020; 15(6): e0233959.     CrossRef
  • The Senescence (Stay-Green)—An Important Trait to Exploit Crop Residuals for Bioenergy
    Eduardo D. Munaiz, Susana Martínez, Arun Kumar, Marlon Caicedo, Bernardo Ordás
    Energies.2020; 13(4): 790.     CrossRef
  • The Use of Genetic and Gene Technologies in Shaping Modern Rapeseed Cultivars (Brassica napus L.)
    Linh Bao Ton, Ting Xiang Neik, Jacqueline Batley
    Genes.2020; 11(10): 1161.     CrossRef
  • Selected Physicochemical Properties of Diethyl Ether/Rapeseed Oil Blends and Their Impact on Diesel Engine Smoke Opacity
    Krzysztof Górski, Ruslans Smigins
    Energy & Fuels.2018; 32(2): 1796.     CrossRef
  • Biodiesel synthesis from Brassica napus seed oil using statistical optimization approach
    Faiza Anwar, Umer Rashid, Sobia Ashraf, Saud Ibrahim Al-Resayes, Muhammad Aamer Mehmood, Imededdine Arbi Nehdi, Muhammad Ibrahim, Muhammad Asif Hanif
    Journal of Renewable and Sustainable Energy.2017;[Epub]     CrossRef
  • 17 View
  • 0 Download
  • 26 Crossref

Research Article

MADS-Box Genes Are Associated with the Petaloidy/Sepaloidy of Stamens in Cytoplasmic Male Sterile Brassica
Gopal Saha, Jong-In Park, Hoytaek Kim, Kwon-Kyoo Kang, Yong-Gu Cho, Ill-Sup Nou
Plant Breed. Biotech. 2016;4(1):40-50.   Published online February 28, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.1.40

MADS-box genes are well known for the ABC model of flower development. In this study, we investigated the expressions of A, B and C functions Brassica rapa MADS-box genes in different Ogura cytoplasmic male sterile (CMS) lines of B. juncea, B. oleracea, and their wild types. We observed two AP1-like (BjAP1 and BoCAL1), three PISTILLATA-like (PI-like; BjPI1, BoPI1, and BoPI2) and six AGAMOUS-like (AG-like; BjAGL1, BjAGL2, BjAGL3, BjAGL4, BoAGL1, and BoAGL2) genes to be altered their expressions in the CMS B. juncea and B. oleracea compared to their wild types. Partial and complete petaloidy in the third whorl (stamen) were observed of two CMS B. juncea lines J26 and J27, respectively. Besides, a sepaloidy structure was evident in the third whorl of CMS B. oleracea line 25053. Altered expressions of BjAP1 and BjPI1 in the fourth whorl (pistil) can be correlated with curved and robust stature of pistils in CMS B. juncea. Furthermore, an in silico protein interaction analysis revealed that AP-like, PI-like, and AG-like proteins are in close association with different MADS-box proteins and LEAFY (LFY), UNUSUAL FLORAL ORGANS (UFO), SEUSS (SEU), LEUNIG (LUG) for different floral organ development. We suggest that expressions of MADS-box genes might be dependent on mitochondrial signaling for cytoplasmic homeosis in CMS B. juncea and B. oleracea. The expression dataset on A, B, and C functions MADS-box genes of CMS and wild type B. juncea and B. oleracea presented in this study might be useful for the development of CMS in different Brassica species.

  • 12 View
  • 0 Download

Review Articles

Genome Sequencing, a Milestone for Genomic Research and Plant Breeding
Md. Amdadul Huq, Shahina Akter, Yu-Jin Jung, Ill Sup Nou, Yong-Gu Cho, Kwon-Kyoo Kang
Plant Breed. Biotech. 2016;4(1):29-39.   Published online February 28, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.1.29

Plant breeding programs are often used to improve varieties through creating diverse agronomic traits. During a breeding program, a lot of genetic diversities are created in the genome after different generations through homologous recombination. Genome sequencing technology has revolutionized the discovery of genes and molecular markers associated with diverse agronomic traits in crop improvement programs. Genomic research is now in the peak of success, thus creating new opportunities for crop improvement modern sequencing technology is now capable of sequencing thousands to millions of bases per run. Modern sequencing technologies enable the sequencing of different cultivars with small to complex genomes at a reasonable time and cost. These massive data can be used to identify important agronomic traits of crops such as fruit color, size, ripening, flowering time adaptation, grain yield, and quality maintenance. In addition, they can be used to develop crop varieties. This mini-review is focused on the role of genome sequencing in genomic research and plant breeding for crop improvements.

Citations

Citations to this article as recorded by  
  • Combining Traditional Breeding with Molecular Techniques: An Integrative Approach
    Md. Nahid Hasan, Tasmina Islam Simi, Sk Shoaibur Rahaman, Md. Abdur Rahim
    Phyton.2025; 94(8): 2313.     CrossRef
  • Genome resequencing reveals the population structure and genetic diversity of almond in Xinjiang, China
    Pengyu Wu, Dong Li, Rui Zhuang, Hao Zuo, Zhiyong Pan, Bo Yang, Chongzhi Xu
    Genetic Resources and Crop Evolution.2023; 70(8): 2713.     CrossRef
  • Mechanism and Utilization of Ogura Cytoplasmic Male Sterility in Cruciferae Crops
    Wenjing Ren, Jinchao Si, Li Chen, Zhiyuan Fang, Mu Zhuang, Honghao Lv, Yong Wang, Jialei Ji, Hailong Yu, Yangyong Zhang
    International Journal of Molecular Sciences.2022; 23(16): 9099.     CrossRef
  • Molecular Marker Development and Gene Cloning for Diverse Disease Resistance in Pepper (Capsicum annuumL.): Current Status and Prospects
    Geleta Dugassa Barka, Jundae Lee
    Plant Breeding and Biotechnology.2020; 8(2): 89.     CrossRef
  • Current understanding of male sterility systems in vegetable Brassicas and their exploitation in hybrid breeding
    Saurabh Singh, S. S. Dey, Reeta Bhatia, Raj Kumar, T. K. Behera
    Plant Reproduction.2019; 32(3): 231.     CrossRef
  • Next generation crop improvement program: Progress and prospect in tea ( Camellia sinensis (L.) O. Kuntze)
    Anjan Hazra, Nirjhar Dasgupta, Chandan Sengupta, Sauren Das
    Annals of Agrarian Science.2018; 16(2): 128.     CrossRef
  • 14 View
  • 0 Download
  • 6 Crossref
Genomics Researches and Their Applications in Plant Breeding at PAG XXIV Conference
Franz Marielle Nogoy, Shadi Rahimi, Kwon-Kyoo Kang, Yong-Gu Cho
Plant Breed. Biotech. 2016;4(1):16-28.   Published online February 28, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.1.16

The rise of whole genome sequences of different plants provided more understanding about the gene regulation and genome evolution in further studying plants. More and more pathways and networks are identified by novel gene discoveries. Therefore, the Plant and Animal Genome Conference (PAG XXIV) provides a good venue to share the recent progress in the area of plant research genome sequencing technologies in various plants. However, this information can make a powerful system for developing improved crop varieties. By the way, the genome annotation and assembly is an essential key for breeding of stress-tolerant plants. PAG XXIV demonstrated different works about the extensive use of genomic databases accompanied by bioinformatics tools to accelerate breeding methods, discovery of new approaches to genomics, further increasing biomass of bioenergy crops, and explaining the genetic mechanisms in plant growth and defense. This review article summarizes some of the researches in various plants of rice, corn, wheat, cottonwood, switchgrasses, Thinopyrum, wheatgrass and Arabidopsis presented in PAG XXIV with the focus on genome technologies and their applications in plant breeding.

  • 4 View
  • 0 Download
Global Trends in Plant Genomics Research to Improve Crop Productivity at PAG XXIV Conference
Shadi Rahimi, Kwon-Kyoo Kang, Yong-Gu Cho
Plant Breed. Biotech. 2016;4(1):1-15.   Published online February 28, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.1.1

Increasing demand for food commodities and energy supply highlight the necessity to further improve crop productivity. At the Plant and Animal Genome Conference (PAG XXIV), recent developments and future plans for genomics research of plants and animals were presented. PAG XXIV provided a forum to explore crop genomes with the aim of providing new opportunities for crop breeding and the foundation for functional genomic studies to improve agriculture production and help feed the growing population. Genetic diversity and population structure studies of crops have allowed us to explore alleles related to different characteristics important for plant breeding. Several useful databases were introduced in PAG XXIV. They were developed to integrate a growing set of commonly used data types and analysis tools with new capabilities for visualization, exploration, and predictive analysis. This review highlights the global trends in plant genomics presented at PAG XXIV by focusing on crop productivity.

Citations

Citations to this article as recorded by  
  • Drought-Tolerant Biotech Soybean Breeding in South America: Current Status, Commercialization, and Implications for Korea’s Technology Export Strategy
    Seung Young Choi, Yong Hun Song, Seung Muk Won, Kyeong Hee Lee, Ga Ram Kim, Taeyoung Um
    Korean Journal of Breeding Science.2026; 58(1): 13.     CrossRef
  • 7 View
  • 0 Download
  • 1 Crossref

Research Articles

Enhancement of Rice Resistance to Bacterial Blight by Overexpressing BrCP3 Gene of Brassica rapa
Marjohn C. Niño, Hye Jung Lee, Joonki Kim, Sailila E. Abdula, Yu-Jin Jung, Kwon-Kyoo Kang, Illsup Nou, Yong-Gu Cho
Plant Breed. Biotech. 2015;3(4):355-365.   Published online November 30, 2015
DOI: https://doi.org/10.9787/PBB.2015.3.4.355

Brassica rapa cysteine protease 3 (BrCP3) is an endopeptidase member of C1A family (papain-like) and CA clan of cysteine protease. Members of papain-like cysteine protease (CP) have emerged to be key enzymes involved in cell death in response to biotic and environmental stresses. Recent progress of CP research features its diverse and overlapping role in basal and effector-triggered immunity. This study was carried out to characterize BrCP3 gene in Chinese cabbage and explore its function in rice – Xanthomonas oryzae pv. oryzae pathosystem. Phylogenetic analysis and BLASTP search of its amino acid sequence to the Arabidopsis Protein TAIR 10 database identified BrCP3 as the closest ortholog of Arabidopsis RD21a. The full-length cDNA of BrCP3 was cloned and transformed into the genome of japonica rice cv. ‘Gopum’. Constitutive overexpression of the transgene is driven by Ubi-1 promoter in pFLCIII vector. Regenerated single copy overexpression rice lines were inoculated with three Xoo Korean isolates. Regulation of rice resistance through cysteine protease activity is evident in the overexpression lines which showed enhanced immunity to three isolates as depicted by reduced lesion length compared with the wild type. Our initial results implicate an interesting biological function of BrCP3 in rice system that has never been reported before.

Citations

Citations to this article as recorded by  
  • Development of Transgenic Brassica Crops against Biotic Stresses Caused by Pathogens and Arthropod Pests
    Jorge Poveda, Marta Francisco, M. Elena Cartea, Pablo Velasco
    Plants.2020; 9(12): 1664.     CrossRef
  • Overexpression of rice premnaspirodiene oxygenase reduces the infection rate ofXanthomonas oryzaepv.oryzae
    Marjohn C. Niño, Jae-Young Song, Franz Marielle Nogoy, Me-Sun Kim, Yu Jin Jung, Kwon-Kyoo Kang, Illsup Nou, Yong-Gu Cho
    Journal of Plant Biotechnology.2016; 43(4): 422.     CrossRef
  • Application and utilization of marker assisted selection for biotic stress resistance in hybrid rice (Oryza sativaL.)
    Jae-Young Song, Sothea Ouk, Franz Marielle Nogoy, Marjohn C. Niño, Soon Wook Kwon, Woongoo Ha, Kwon-Kyoo Kang, Yong-Gu Cho
    Journal of Plant Biotechnology.2016; 43(3): 317.     CrossRef
  • 11 View
  • 0 Download
  • 3 Crossref
Modification of Starch Composition Using RNAi Targeting Soluble Starch Synthase I in Japonica Rice
Hye Jung Lee, Moo-Geun Jee, Joonki Kim, Franz M.C. Nogoy, Marjohn C. Niño, Dal-A Yu, Me Sun Kim, Mingmao Sun, Kwon-Kyoo Kang, Illsup Nou, Yong-Gu Cho
Plant Breed. Biotech. 2014;2(3):301-312.   Published online September 30, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.3.301

An increasing preference for good eating quality of rice among consumers has become one of the important considerations in rice breeding. Amylose content is a leading factor affecting eating quality of rice. Amylose composition is determined by the relative activity of soluble starch synthase (SSS) and granule-bound starch synthase (GBSS). This study focused on modifying the expression of SSSI gene which is responsible for amylopectin and amylose synthesis in rice by using RNA interference (RNAi) technology. The transgenic rice plants showed various amylose contents (11–17%) in rice grains. Favorable rice lines were selected according to genomic PCR, transgene expression and amylose contents analysis. A semi-quantitative RT-PCR was carried out to determine the expression level of SSSI gene after flowering of transgenic rice and wild type. Down-regulation of SSSI gene in transgenic plants was evident in the decreasing expression in rice grains. Accordingly, scanning electron microscopy (SEM) analysis revealed uniform size with smooth curves starch granules in down-regulation rice lines, in contrast with the non-uniform granules in wild type. Results indicated that RNAi-SSSI transgenic lines produced low amylose contents that fell between glutinous and non-glutinous rice. This study showed that down-regulation of endogenous SSSI may improve the eating quality in rice.

Citations

Citations to this article as recorded by  
  • Biochemical markers for low glycemic index and approaches to alter starch digestibility in rice
    Awadhesh Kumar, Upasana Sahoo, Milan Kumar Lal, Rahul Kumar Tiwari, Sangram Keshari Lenka, Nihar Ranjan Singh, Om Prakash Gupta, Rameswar Prasad Sah, Srigopal Sharma
    Journal of Cereal Science.2022; 106: 103501.     CrossRef
  • Soluble Starch Synthase Enzymes in Cereals: An Updated Review
    Ahsan Irshad, Huijun Guo, Shoaib Ur Rehman, Xueqing Wang, Chaojie Wang, Ali Raza, Chunyun Zhou, Yuting Li, Luxiang Liu
    Agronomy.2021; 11(10): 1983.     CrossRef
  • SSIIIa-RNAi suppression associated changes in rice grain quality and starch biosynthesis metabolism in response to high temperature
    Qian Zhao, Yu Ye, Zhanyu Han, Lujian Zhou, Xianyue Guan, Gang Pan, Muhammad-Asad-Ullah Asad, Fangmin Cheng
    Plant Science.2020; 294: 110443.     CrossRef
  • Physico-chemical characterization and transcriptome analysis of 5-methyltryptophan resistant lines in rice
    Franz Marielle Nogoy, Yu Jin Jung, Kwon-Kyoo Kang, Yong-Gu Cho, Wujun Ma
    PLOS ONE.2019; 14(9): e0222262.     CrossRef
  • Characterization of ‘GolSam’ Lines Developed from the Cross between Samgwang and 5MT Resistant Lines in Rice
    Franz Marielle Nogoy, Yu Jin Jung, Kwon Kyoo Kang, Yong-Gu Cho
    Plant Breeding and Biotechnology.2018; 6(3): 233.     CrossRef
  • Crop resistant starch and genetic improvement: a review of recent advances
    Jian Xia, Dong Zhu, Ruomei Wang, Yue Cui, Yueming Yan
    Theoretical and Applied Genetics.2018; 131(12): 2495.     CrossRef
  • Application of ZFN for Site Directed Mutagenesis of Rice SSIVa Gene
    Yu-Jin Jung, Franz Marielle Nogoy, Sang-Kyu Lee, Yong-Gu Cho, Kwon-Kyoo Kang
    Biotechnology and Bioprocess Engineering.2018; 23(1): 108.     CrossRef
  • Potential impact of genome editing in world agriculture
    Wendy Harwood, Jorge Martínez-Fortún, Dylan W. Phillips, Huw D. Jones
    Emerging Topics in Life Sciences.2017; 1(2): 117.     CrossRef
  • Overexpression of BrCIPK1 Gene Enhances Abiotic Stress Tolerance by Increasing Proline Biosynthesis in Rice
    Sailila E. Abdula, Hye-Jung Lee, Hojin Ryu, Kwon Kyoo Kang, Illsup Nou, Mark E. Sorrells, Yong-Gu Cho
    Plant Molecular Biology Reporter.2016; 34(2): 501.     CrossRef
  • BrUGE1 transgenic rice showed improved growth performance with enhanced drought tolerance
    Sailila E. Abdula, Hye Jung Lee, Joonki Kim, Marjohn C. Niño, Yu-Jin Jung, Young-Chan Cho, Illsup Nou, Kwon-Kyoo Kang, Yong-Gu Cho
    Breeding Science.2016; 66(2): 226.     CrossRef
  • 13 View
  • 0 Download
  • 10 Crossref
Review Article
Application of Antimicrobial Peptides for Disease Control in Plants
Yu-Jin Jung, Kwon-Kyoo Kang
Plant Breed. Biotech. 2014;2(1):1-13.   Published online March 31, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.1.001

A large number of antimicrobial peptides (AMPs) from different organisms have been characterized to date. AMPs are small molecular weight proteins with broad spectrum antimicrobial activity against bacteria, viruses, and fungi. Several diseases in plants could result in serious losses and decreasing quality and safety of agricultural products. Being an agent for plant defense, AMPs kill target cells through diverse mechanisms once in a target microbial membrane. Cathelicidins, defensins and thionins are the three major groups of epidermal AMPs in human and plants. Plant AMPs are structurally and functionally diverse and can be directed against other organisms, like herbivorous insects. The biological activity of plant AMPs primarily depends on interactions with membrane lipids. Several antimicrobial peptides have been expressed in transgenic plants to confer disease protection. Antimicrobial peptides are interesting compounds that can be efficiently exploited for disease control in plants in a way that complies with the strict regulations on the efficacy and safety of disease control strategy.

Citations

Citations to this article as recorded by  
  • Characterization and Biofungicide Potential of a Novel Antifungal defensin, K4CBP6, from Solanum lycopersicum L.
    Rebeka Papp, Péter Poór, Zalán Czékus, Györgyi Váradi, Zoltán Kele, Attila Borics, Gábor Bende, Kata Horváti, Gábor K. Tóth, László Galgóczy, Liliána Tóth
    Probiotics and Antimicrobial Proteins.2025;[Epub]     CrossRef
  • A stitch in time: Sustainable and eco-friendly solutions for kiwifruit bacterial canker
    Muhammad Asif, Shuang Liang, Hu RenJian, Xin Xie, Zhibo Zhao
    Physiological and Molecular Plant Pathology.2025; 136: 102506.     CrossRef
  • Scientific and technological advances in the development of sustainable disease management tools: a case study on kiwifruit bacterial canker
    Miguel G. Santos, Marta Nunes da Silva, Marta W. Vasconcelos, Susana M. P. Carvalho
    Frontiers in Plant Science.2024;[Epub]     CrossRef
  • Лінії томатів, які експресують ген лактоферину людини, характеризуються стійкістю до фітофторозу
    А.Ю. Бузиашвили, Л.М. Чередніченко, С.В. Кропивко, А.І. Ємець
    Reports of the National Academy of Sciences of Ukraine.2024; (5): 95.     CrossRef
  • Antimicrobial Peptides
    Noorul Samsoon Maharifa Haja Mohaideen, S. Vaani, S. Hemalatha
    Current Pharmacology Reports.2023; 9(6): 433.     CrossRef
  • Transgenic tobacco plants expressing a chimeric antimicrobial protein show disease resistance to plant diseases
    Ziba Nazari, Farhad Nazarian-Firouzabadi, Ahmad Ismaili, Mostafa Darvishnia
    Physiological and Molecular Plant Pathology.2023; 127: 102083.     CrossRef
  • Lactoferrin and its role in biotechnological strategies for plant defense against pathogens
    Anastasiia Buziashvili, Alla Yemets
    Transgenic Research.2023; 32(1-2): 1.     CrossRef
  • In silico characterization of differentially expressed short-read nucleotide sequences identified in dieback stress-induced transcriptomic analysis reveals their role as antimicrobial peptides
    Siddra Ijaz, Imran Ul Haq, Riffat Malik, Ghalia Nadeem, Hayssam M. Ali, Sukhwinder Kaur
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Biotechnological approaches for enhancing the resistance of tomato plants to phytopathogenic bacteria
    A. BUZIASHVILI, Y. KOLOMIIETS, L. BUTSENKO, A. YEMETS
    Biologia plantarum.2023; 67: 305.     CrossRef
  • Heterologous Expression and Functional Characterization of CAP18 from Oryctolagus cuniculus
    Mahla Nikpoor, Azadeh Lohrasbi-Nejad, Jafar Zolala
    Reports of Biochemistry and Molecular Biology.2022; 10(4): 622.     CrossRef
  • Biotechnological Approaches to Increase the Bacterial and Fungal Disease Resistance in Potato
    Olena Kvasko, Yuliia Kolomiiets, Anastasiia Buziashvili, Alla Yemets
    The Open Agriculture Journal.2022;[Epub]     CrossRef
  • The combination of Neosartorya (Aspergillus) fischeri antifungal proteins with rationally designed γ-core peptide derivatives is effective for plant and crop protection
    Liliána Tóth, Péter Poór, Attila Ördög, Györgyi Váradi, Attila Farkas, Csaba Papp, Gábor Bende, Gábor K. Tóth, Gábor Rákhely, Florentine Marx, László Galgóczy
    BioControl.2022; 67(2): 249.     CrossRef
  • Nicotiana benthamiana as a model plant host for Xylella fastidiosa: Control of infections by transient expression and endotherapy with a bifunctional peptide
    Aina Baró, Pasquale Saldarelli, Maria Saponari, Emilio Montesinos, Laura Montesinos
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • High Resistance of Potato to Early Blight Is Achieved by Expression of the Pro-SmAMP1 Gene for Hevein-Like Antimicrobial Peptides from Common Chickweed (Stellaria media)
    Denis V. Beliaev, Natalia O. Yuorieva, Dmitry V. Tereshonok, Ilina I. Tashlieva, Marina K. Derevyagina, Alexei A. Meleshin, Eugene A. Rogozhin, Sergey A. Kozlov
    Plants.2021; 10(7): 1395.     CrossRef
  • Antimicrobial peptides against colorectal cancer-a focused review
    Sonia Chauhan, Devinder K. Dhawan, Avneet Saini, Simran Preet
    Pharmacological Research.2021; 167: 105529.     CrossRef
  • De Novo Design of Antimicrobial Peptides With a Special Charge Pattern and Their Application in Combating Plant Pathogens
    Eric H. -L. Chen, Cheng-Wei Weng, Yi-Min Li, Ming-Chin Wu, Chien-Chih Yang, Kung-Ta Lee, Rita P. -Y. Chen, Chiu-Ping Cheng
    Frontiers in Plant Science.2021;[Epub]     CrossRef
  • Pectobacterium brasiliense: Genomics, Host Range and Disease Management
    Said Oulghazi, Sohaib Sarfraz, Maja A. Zaczek-Moczydłowska, Slimane Khayi, Abdelaziz Ed-Dra, Yassir Lekbach, Katrina Campbell, Lucy Novungayo Moleleki, Richard O’Hanlon, Denis Faure
    Microorganisms.2021; 9(1): 106.     CrossRef
  • The potential use of the Penicillium chrysogenum antifungal protein PAF, the designed variant PAFopt and its γ‐core peptide Pγopt in plant protection
    Liliána Tóth, Éva Boros, Péter Poór, Attila Ördög, Zoltán Kele, Györgyi Váradi, Jeanett Holzknecht, Doris Bratschun‐Khan, István Nagy, Gábor K. Tóth, Gábor Rákhely, Florentine Marx, László Galgóczy
    Microbial Biotechnology.2020; 13(5): 1403.     CrossRef
  • Biofungicidal Potential of Neosartorya (Aspergillus) Fischeri Antifungal Protein NFAP and Novel Synthetic γ-Core Peptides
    Liliána Tóth, Györgyi Váradi, Éva Boros, Attila Borics, Hargita Ficze, István Nagy, Gábor K. Tóth, Gábor Rákhely, Florentine Marx, László Galgóczy
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Enhanced Resistance toFusarium graminearumin Transgenic Arabidopsis Plants Expressing a Modified Plant Thionin
    Guixia Hao, Matthew G. Bakker, Hye-Seon Kim
    Phytopathology®.2020; 110(5): 1056.     CrossRef
  • Obtaining Transgenic Potato Plants Expressing the Human Lactoferrin Gene and Analysis of Their Resistance to Phytopathogens
    A. Buziashvili, L. Cherednichenko, S. Kropyvko, Ya. B. Blume, A. Yemets
    Cytology and Genetics.2020; 54(3): 179.     CrossRef
  • Complete reutilisation of mixed mackerel and brown seaweed wastewater as a high-quality biofertiliser in open-flow lettuce hydroponics
    Hyun Yi Jung, Joong Kyun Kim
    Journal of Cleaner Production.2020; 247: 119081.     CrossRef
  • Study on Antiviral Activity of Two Recombinant Antimicrobial Peptides Against Tobacco Mosaic Virus
    Mohammad Ali Sabokkhiz, Abbas Tanhaeian, Mojtaba Mamarabadi
    Probiotics and Antimicrobial Proteins.2019; 11(4): 1370.     CrossRef
  • Plant defensins: types, mechanism of action and prospects of genetic engineering for enhanced disease resistance in plants
    Raham Sher Khan, Aneela Iqbal, Radia Malak, Kashmala Shehryar, Syeda Attia, Talaat Ahmed, Mubarak Ali Khan, Muhammad Arif, Masahiro Mii
    3 Biotech.2019;[Epub]     CrossRef
  • A structural perspective of plant antimicrobial peptides
    Marcelo Lattarulo Campos, Luciano Morais Lião, Eliane Santana Fernandes Alves, Ludovico Migliolo, Simoni Campos Dias, Octávio Luiz Franco
    Biochemical Journal.2018; 475(21): 3359.     CrossRef
  • Expression of antimicrobial peptides under control of a camalexin-biosynthetic promoter confers enhanced resistance against Pseudomonas syringae
    Alexandra Chapman, Christian Lindermayr, Erich Glawischnig
    Phytochemistry.2016; 122: 76.     CrossRef
  • Expression levels of antimicrobial peptide tachyplesin I in transgenic Ornithogalum lines affect the resistance to Pectobacterium infection
    Alexander Lipsky, Janak Raj Joshi, Nir Carmi, Iris Yedidia
    Journal of Biotechnology.2016; 238: 22.     CrossRef
  • Thanatin confers partial resistance against aflatoxigenic fungi in maize (Zea mays)
    Max Schubert, Marcel Houdelet, Karl-Heinz Kogel, Rainer Fischer, Stefan Schillberg, Greta Nölke
    Transgenic Research.2015; 24(5): 885.     CrossRef
  • 18 View
  • 0 Download
  • 28 Crossref