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"Inheritance"

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"Inheritance"

Research Articles

Inheritance and Phenotypic Stability of Homoeolog-Edited Mutants in Hexaploid Solanum nigrum
Eun Song Lee, Hye-young Kang, Yu Seon Chae, Soon Ju Park
Plant Breed. Biotech. 2025;13:97-107.
Published online April 29, 2025
DOI: https://doi.org/10.9787/PBB.2025.13.97

Polyploid plants, such as hexaploid Solanum nigrum, present new challenges and opportunities for trait improvement due to their complex genome structures and homoeologous gene interactions. Gene editing of homoeologs provides a powerful tool to investigate the inheritance and phenotypic effects of mutations in polyploid systems. Here, we investigated the inheritance and phenotypic traits of homoeolog-edited triple and double mutants in hexaploid S. nigrum. Triple mutant genotypes (sns and snsp) were used for analyzing inheritance patterns through backcrossing and self-pollination, revealing independent segregation of homoeologous variants and consistent genotypic ratios across generations. Yield and related traits were evaluated in fixed double mutants (sns1 sns2, sns1 sns3, sns2 sns3) under greenhouse and open-field conditions. Open-field cultivation significantly enhanced yield, primarily through increased fruit weight per inflorescence, whereas greenhouse cultivation showed more modest improvements. Other traits such as plant weight and Brix values remained largely unchanged. Yield improvements were stable across F3 to F5 generations, with minimal genotype-specific variability. These findings highlight the potential of homoeolog-targeted editing in polyploid plants to achieve stable and environment-specific yield enhancements.

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  • Genetic mapping of tomato mutants using InDel markers between S. pimpinellifolium and two S. lycopersicum cultivars
    Smita Mirsyad Warsadiharja, Shandra Amarillis, Jung Heo, Seunghye Park, Hye-yeong Kang, Yong Jun Kim, Junwoo Lee, Kang Il Cha, Eun Song Lee, Ji In Jang, A-ra Joh, Keunhwa Kim, Young Koung Lee, Jong Chan Hong, Soon Ju Park
    Plant Biotechnology Reports.2025; 19(6): 839.     CrossRef
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Inheritance and Quantitative Trait Loci Analysis of Resistance Genes to Bruchid and Bean Bug in Mungbean (Vigna radiata L. Wilczek)
Myon-Gi Hong, Kil-Hyun Kim, Ja-Hwan Ku, Jin-Kyo Jeong, Min-Jung Seo, Chang-Hwan Park, Yul-Ho Kim, Hong-Sik Kim, Yong-Kwon Kim, So-Hyeon Baek, Dool-Yi Kim, Su-Kwon Park, Sun-Lim Kim, Jung-Kyung Moon
Plant Breed. Biotech. 2015;3(1):39-46.   Published online March 31, 2015
DOI: https://doi.org/10.9787/PBB.2015.3.1.039

Bruchid (Callosobruchus chinenesis L.) and pod sucking bug (Riptortus clavatus Thunberg) are serious insect pests during the reproduction stage and seed storage period of legume crops worldwide. However, few sources of resistance to each of these insects have been identified and characterized, and no genetic studies have been carried out with simultaneous tests of these two insects. In this study, the inheritance of seed resistance to Callosobruchus chinenesis L. and Riptortus clavatus Thunberg was examined in a mungbean cultivar, Jangan mungbean, which was developed by backcrossing with the V2709 resistant donor. The F1, F2, and F3 seed generations were developed from the cross between susceptible and resistant parents, and evaluated for resistance to the two insects. It was found that resistance to bruchid and bean bug was controlled by a single dominant gene in the F1 and F2 seeds. However, the segregation pattern of reciprocal reaction to each insect in F2 seeds showed seeds were susceptible to each insect. These results suggest that the resistance genes in Jangan mungbean to bug and weevil are either different or closely linked with each other. A genetic linkage map 13.7 cM in length with 6 markers was successfully constructed. Two QTLs were identified for bruchid resistance, and a QTL for bean bug resistance was detected. One of the QTLs for resistance to bruchid was shared with the QTL for bean bug. These newly developed closely linked markers will be used for cloning of the resistance genes to bruchid and bean bug in the future.

Citations

Citations to this article as recorded by  
  • Induction of Plant Defences and Production of Kaempferol‐7‐O‐Glucoside Against Spodoptera litura in Resistant Wild Mungbean
    Sook‐Kuan Lee, Bing‐Rong Chen, Chih‐Yu Lin, Cheng‐Hsiang Kuo, Yi‐Ju Chen, Ya‐Ping Lin, Yuan‐Yun Zhang, Ripley H. Tisdale, Cheng‐Ruei Lee, Wen‐Po Chuang, Hieng‐Ming Ting
    Plant, Cell & Environment.2026; 49(7): 4558.     CrossRef
  • Metabolic Discrimination of Mungbean (Vigna radiata L.) Sprout Depending on Growth Time from Multivariate Analysis of FT-IR Spectroscopy Data
    Song Yie Park, Yeong Jae Ah, Eun Ji Suh, Eun Bin Choi, Mi Ja Lee, Han Gyeol Lee, Woo Duck Seo, Yu-Na Kim, Seung-Yeob Song
    Korean Journal of Breeding Science.2024; 56(3): 269.     CrossRef
  • Genome-Wide Association Studies on Resistance to Pea Weevil: Identification of Novel Sources of Resistance and Associated Markers
    Salvador Osuna-Caballero, María J. Cobos, Carmen M. Ruiz, Osman Z. Wohor, Nicolas Rispail, Diego Rubiales
    International Journal of Molecular Sciences.2024; 25(14): 7920.     CrossRef
  • Next-Generation Sequencing in the Development of Climate-Resilient and Stress-Responsive Crops – A Review
    Amitava Roy, Suman Dutta, Sumanta Das, Malini Roy Choudhury
    The Open Biotechnology Journal.2024;[Epub]     CrossRef
  • Molecular mechanisms, genetic mapping, and genome editing for insect pest resistance in field crops
    Shabir H. Wani, Mukesh Choudhary, Rutwik Barmukh, Pravin K. Bagaria, Kajal Samantara, Ali Razzaq, Jagdish Jaba, Malick Niango Ba, Rajeev K. Varshney
    Theoretical and Applied Genetics.2022; 135(11): 3875.     CrossRef
  • Thirty Years of Mungbean Genome Research: Where Do We Stand and What Have We Learned?
    Prakit Somta, Kularb Laosatit, Xingxing Yuan, Xin Chen
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Screening of endemic wild Vigna accessions for resistance to three bruchid species
    Revanasidda Aidbhavi, Aditya Pratap, Prasoon Verma, Amrit Lamichaney, Sanjay M. Bandi, S.D. Nitesh, Mohd Akram, Meenal Rathore, Bansa Singh, Narendra P. Singh
    Journal of Stored Products Research.2021; 93: 101864.     CrossRef
  • Two polygalacturonase-inhibiting proteins (VrPGIP) of Vigna radiata confer resistance to bruchids (Callosobruchus spp.)
    Qinxue Zhang, Qiang Yan, Xingxing Yuan, Yun Lin, Jingbin Chen, Ranran Wu, Chenchen Xue, Yuelin Zhu, Xin Chen
    Journal of Plant Physiology.2021; 258-259: 153376.     CrossRef
  • Biotic and Abiotic Constraints in Mungbean Production—Progress in Genetic Improvement
    Ramakrishnan M. Nair, Abhay K. Pandey, Abdul R. War, Bindumadhava Hanumantharao, Tun Shwe, AKMM Alam, Aditya Pratap, Shahid R. Malik, Rael Karimi, Emmanuel K. Mbeyagala, Colin A. Douglas, Jagadish Rane, Roland Schafleitner
    Frontiers in Plant Science.2019;[Epub]     CrossRef
  • Effects of radiofrequency on the development and performance of Callosobruchus chinensis (Coleoptera: Chrysomelidae: Bruchinae) on three different leguminous seeds
    Rameswor Maharjan, Hwijong Yi, Jeongjoon Ahn, Gwang Hyun Roh, Chunggyoo Park, Youngnam Yoon, Yunwoo Jang, Inyoul Baek, Yongchul Kim, Soondo Bae
    Applied Entomology and Zoology.2019; 54(3): 255.     CrossRef
  • Mung bean (Vigna radiata) cultivars mediated oviposition preference and development of Callosobruchus chinensis (Coleoptera: Chrysomelidae: Bruchinae)
    Rameswor Maharjan, Hwijong Yi, Hyuntae Kim, Youngnam Yoon, Yunwoo Jang, Soondo Bae
    Applied Entomology and Zoology.2018; 53(1): 55.     CrossRef
  • Bruchid pest management in pulses: past practices, present status and use of modern breeding tools for development of resistant varieties
    S.K. Mishra, M.L.R. Macedo, S.K. Panda, J. Panigrahi
    Annals of Applied Biology.2018; 172(1): 4.     CrossRef
  • Beans with Benefits—The Role of Mungbean (<i>Vigna radiate</i>) in a Changing Environment
    Lisa Pataczek, Zahir Ahmad Zahir, Maqshoof Ahmad, Saima Rani, Ramakrishnan Nair, Roland Schafleitner, Georg Cadisch, Thomas Hilger
    American Journal of Plant Sciences.2018; 09(07): 1577.     CrossRef
  • Novel Alleles of Two Tightly Linked Genes Encoding Polygalacturonase-Inhibiting Proteins (VrPGIP1 and VrPGIP2) Associated with the Br Locus That Confer Bruchid (Callosobruchus spp.) Resistance to Mungbean (Vigna radiata) Accession V2709
    Anochar Kaewwongwal, Jingbin Chen, Prakit Somta, Alisa Kongjaimun, Tarika Yimram, Xin Chen, Peerasak Srinives
    Frontiers in Plant Science.2017;[Epub]     CrossRef
  • Chilling susceptibility in mungbean varieties is associated with their differentially expressed genes
    Li-Ru Chen, Chia-Yun Ko, William R. Folk, Tsai-Yun Lin
    Botanical Studies.2017;[Epub]     CrossRef
  • Mechanism of Resistance in Mungbean [Vigna radiata (L.) R. Wilczek var. radiata] to bruchids, Callosobruchus spp. (Coleoptera: Bruchidae)
    Abdul R. War, Surya Murugesan, Venkata N. Boddepalli, Ramasamy Srinivasan, Ramakrishnan M. Nair
    Frontiers in Plant Science.2017;[Epub]     CrossRef
  • Identification of single nucleotide polymorphism markers associated with resistance to bruchids (Callosobruchus spp.) in wild mungbean (Vigna radiata var. sublobata) and cultivated V. radiata through genotyping by sequencing and quantitative trait locus a
    Roland Schafleitner, Shu-mei Huang, Shui-hui Chu, Jo-yi Yen, Chen-yu Lin, Miao-rong Yan, Bharath Krishnan, Mao-sen Liu, Hsiao-feng Lo, Chien-yu Chen, Long-fang O. Chen, Dung-chi Wu, Thu-Giang Thi Bui, Srinivasan Ramasamy, Chih-wei Tung, Ramakrishnan Nair
    BMC Plant Biology.2016;[Epub]     CrossRef
  • Construction of an integrated map and location of a bruchid resistance gene in mung bean
    Lixia Wang, Chuanshu Wu, Min Zhong, Dan Zhao, Li Mei, Honglin Chen, Suhua Wang, Chunji Liu, Xuzhen Cheng
    The Crop Journal.2016; 4(5): 360.     CrossRef
  • Genomic and transcriptomic comparison of nucleotide variations for insights into bruchid resistance of mungbean (Vigna radiata [L.] R. Wilczek)
    Mao-Sen Liu, Tony Chien-Yen Kuo, Chia-Yun Ko, Dung-Chi Wu, Kuan-Yi Li, Wu-Jui Lin, Ching-Ping Lin, Yen-Wei Wang, Roland Schafleitner, Hsiao-Feng Lo, Chien-Yu Chen, Long-Fang O. Chen
    BMC Plant Biology.2016;[Epub]     CrossRef
  • A gene encoding a polygalacturonase-inhibiting protein (PGIP) is a candidate gene for bruchid (Coleoptera: bruchidae) resistance in mungbean (Vigna radiata)
    Sathaporn Chotechung, Prakit Somta, Jinbing Chen, Tarika Yimram, Xin Chen, Peerasak Srinives
    Theoretical and Applied Genetics.2016; 129(9): 1673.     CrossRef
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T-DNA Inheritance Stability of Resveratrol Rice Iksan526 over Multi-generations
Yang Qin, Hong-Il Ahn, Su-Yoen Park, Myung-Ho Lim, Hee-Jong Woo, Kong-Sik Shin, Jin-Hyoung Lee, Hyun-Suk Cho, So-Hyeon Baek, Soon-Ki Park, Soon-Jong Kweon
Plant Breed. Biotech. 2014;2(3):268-275.   Published online September 30, 2014
DOI: https://doi.org/10.9787/PBB.2014.2.3.268

Confirmation of T-DNA inheritance and stability requires testing of several parameters such as phenotypic performance of transgenic lines, transgene integrity structure and expression stability for at least three consecutive generations, and Mendelian inheritance analysis, which are very important to transgenic breeding and commercialization of genetically modified crops (GMOs). In the present study, we measured nine agronomic and yield-related traits of Iksan526 and confirmed stable phenotypic performance comparing to the donor variety Dongjin over three years. Transgene integrity structure, flanking sequence, functional element copy numbers, absence of backbone sequence and transgene expression were all verified in Iksan526 over three consecutive generations, indicating a stable inheritance of the transgene. In addition, phenotypic and genotypic segregation were analyzed on F2 and F3 populations derived from a cross of Dongjin/Iksan526, and results complied with Mendel’s law of segregation based on single transgene locus. This study demonstrated detailed analyses and confirmation of transgene event Iksan526 which is crucial for commercialization of GMO.

Citations

Citations to this article as recorded by  
  • Analysis of T-DNA integration events in transgenic rice
    Wankui Gong, Yun Zhou, Rui Wang, Xiaoli Wei, Lei Zhang, Yan Dai, Zhen Zhu
    Journal of Plant Physiology.2021; 266: 153527.     CrossRef
  • Genetic Stability, Inheritance Patterns and Expression Stability in Biotech Crops
    Laura Privalle, Patricia Back, Apurv Bhargava, Zach Bishop, Krystal Cisneros, Isabelle Coats, Ine Criel, Lien Dhondt, Travis Draughn, Barb Fowler, Brad Franklin, Durba Ghoshal, Jim Lor, Jennifer Massengil, Sofie Moens, Tyson Mooney, Dannyel Nelson, Karoli
    OBM Genetics.2020; 04(04): 1.     CrossRef
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Review Article
Heritable Epigenetic Variation and its Potential Applications for Crop Improvement
Changqing Zhang, Tzung-Fu Hsieh
Plant Breed. Biotech. 2013;1(4):307-319.   Published online December 31, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.4.307

Phenotypic variation within organisms is driven primarily by genetic diversity. However, there is a growing appreciation that epigenetic variation, resulting from a multitude of diverse chemical modifications to the DNA and chromatin, can have profound effects on phenotype. Heritable epigenetic marks persist through meiosis and can be stably transmitted to the next generation, resulting in transgenerational epigenetic inheritance. Importantly, when epigenetic changes occur near coding genes, affecting their transcriptional state, heritable epigenetic variation can result in heritable phenotypic variation. Large-scale interrogation of epigenome inheritance in Arabidopsis has revealed that spontaneous variation in DNA methylation occurs at a rate that is orders of magnitude greater than genetic mutation, indicating the key importance of epigenetic variation during evolution. Thus, there is a potential for epigenetics to play a role in crop improvement, including regulation of transgene expression and creation of novel epialleles. Here, we review cases of naturally occurring and genetically induced epialleles, and discuss how the studies from two epigenetic populations are rapidly increasing our understanding of epigenetic diversity.

Citations

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  • Epigenetic mechanisms regulating plant responses to abiotic stress and their role in developing climate resilient crops
    J. Bevin Nishanth, Baburao Gaddala, S. Suji, P. Rifa Fathima, A. Premkumar, Balasankar Karavadi, R S A Sorna Kumar, J Iyyappan, Yuvaraj Dinakarkumar
    Discover Plants.2025;[Epub]     CrossRef
  • Characterizing sorghum genotypes for forage yield, hydrocyanic acid and sugar contents under arid climate conditions
    Ahmad Sher, Sami Ul-Allah, Abdul Sattar, Lorenzo Barbanti, Muhammad Ijaz
    Plant Genetic Resources: Characterization and Utilization.2023; 21(4): 377.     CrossRef
  • Regulation of plant epigenetic memory in response to cold and heat stress: towards climate resilient agriculture
    Shamsur Rehman, Zishan Ahmad, Muthusamy Ramakrishnan, Ruslan Kalendar, Qiang Zhuge
    Functional & Integrative Genomics.2023;[Epub]     CrossRef
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    Molecular Biology Reports.2023; 50(9): 7783.     CrossRef
  • Morphological and molecular divergence in ornamental variants of cactus which may be useful to generate new variants
    Andréa Florindo das Neves, Claudete Aparecida Mangolin, Vanessa Neves de Azevedo Fernandes, Eliane Rodrigues Monteiro, Maria de Fátima P. S. Machado
    Plant Genetic Resources: Characterization and Utilization.2022; 20(4): 290.     CrossRef
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    Journal of Experimental Botany.2020; 71(13): 3780.     CrossRef
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    Philippe Gallusci, Zhanwu Dai, Michel Génard, Arnaud Gauffretau, Nathalie Leblanc-Fournier, Céline Richard-Molard, Denis Vile, Sophie Brunel-Muguet
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    Molecular Ecology.2017; 26(6): 1465.     CrossRef
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    Matteo Busconi, Licia Colli, Rosa Ana Sánchez, Marcela Santaella, Marcelino De-Los-Mozos Pascual, Omar Santana, Marta Roldán, José-Antonio Fernández, Mark Gijzen
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  • 21 Crossref