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"High temperature"

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"High temperature"

Research Articles
Genome Wide Association Study of Rice (Oryza sativa L.) during Heading Stage under a High Temperature
Yebin Kwon, Tae-Ho Ham, JeeHye Kim, Gileung Lee, Yoonjung Lee, Joohyun Lee
Plant Breed. Biotech. 2021;9(2):104-111.   Published online June 1, 2021
DOI: https://doi.org/10.9787/PBB.2021.9.2.104

At the reproductive development stage of rice (Oryza sativa L.), temperature stress can decrease spikelet fertility, ultimately resulting in a yield loss. In this study, a total of 98 rice varieties were used in genome-wide association study (GWAS) to understand spikelet fertility under a high temperature (SFHT). GWAS results revealed that two lead SNPs were significantly associated with SFHT. Candidate genes located within ± 250 kb of the corresponding SNP position were discovered, resulting in a total of 21 candidate genes on chromosome 10 and 18 candidate genes on chromosome 11. Based on previously reported function and haplotype analysis, Os10g0177200 (EF-HAND 2domain containing protein) as one candidate gene showed significant differences among groups of haplotypes. This candidate gene will be further evaluated for its function to determine whether it is useful for improving molecular breeding studies and developing new high temperature tolerant rice varieties.

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Citations to this article as recorded by  
  • Phenotypic diversity and multivariate analyses of yield and yield-related traits in amaranth accessions from Malawi
    Abel Sefasi, Mvuyeni Nyasulu, Rowland Maganizo Kamanga, Louis Yalaukani, Samson Pilanazo Katengeza, Maurice Monjerezi, Charles Malidadi, Kingsley Masamba
    BMC Plant Biology.2025;[Epub]     CrossRef
  • Genome-Wide Association Mapping for Yield and Yield-Related Traits in Rice (Oryza Sativa L.) Using SNPs Markers
    Muhammad Ashfaq, Abdul Rasheed, Renshan Zhu, Muhammad Ali, Muhammad Arshad Javed, Alia Anwar, Javaria Tabassum, Shabnum Shaheen, Xianting Wu
    Genes.2023; 14(5): 1089.     CrossRef
  • An overview of genome-wide association mapping studies in Poaceae species (model crops: wheat and rice)
    Muhammad Abu Bakar Zia, Muhammad Farhan Yousaf, Arslan Asim, Muhammad Naeem
    Molecular Biology Reports.2022; 49(12): 12077.     CrossRef
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Variation of Yield and Quality in Early Maturing Rice Cultivars by Transplanting Date in Chungnam Plain Area in Korea
Yeo-Tae Yun, Chong-Tae Chung, Yeong-Ju Lee, Han-Jung Na, Jae-Chul Lee, Dong-Hee Lee, Kwang-Won Lee, Ju-Won Kang, Sang-Nag Ahn
Plant Breed. Biotech. 2015;3(1):47-57.   Published online March 31, 2015
DOI: https://doi.org/10.9787/PBB.2015.3.1.047

Studies were initiated for two consecutive years to examine the effects of transplanting date on the yield and quality of early maturing rice cultivars and to select rice cultivars capable of adapting to early transplanting in the middle plain area. The experiment was laid out in a split-plot design with 3 replications. The main plots consisted of two transplanting dates viz. early (25th of April) and ordinary (25th of May), with sub-plots containing eight cultivars. For early transplanting the mean temperature at the grain filling stage was lower than for ordinary transplanting, while the rice grain quality traits and palatability values were improved. Early transplanting results in 11 days earlier heading, higher head rice yield and lower milled rice yield than ordinary transplanting. Significant differences among the eight cultivars tested in this study were observed for most traits. Among cultivars, ‘Joami’ demonstrated the highest palatability. ‘Joami’ also performed better in head rice ratio and head rice yield than ‘Unkwang’, which is widely cultivated in the middle plain area. Palatability value (PV) showed significant positive correlations with head rice ratio (HR) and amylose content (AC), and negative correlations with chalky rice ratio (CR) and protein content (PC). Mean temperature (MT) was positively correlated with CR and PC, and negatively correlated with HR and AC. The highest positive and negative correlations among the rice quality traits were observed between HR and AC (r = 0.734), and HR and CR (r = −0.944), respectively. Based on the research findings, ‘Joami’ is suitable for early transplanting for cultivation in the Chungnam plain area.

Citations

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  • Effect of Nitrogen Application Methods on Yield and Grain Quality of an Extremely Early Maturing Rice Variety
    Yeotae Yun, Gyucheol Kim, Giwon Cho, Youngju Lee, Tugsang Yun, Hakhun Kim
    Agriculture.2023; 13(4): 832.     CrossRef
  • Effect of Transplanting Date on Agronomic and Grain Quality Traits Using Early-Maturing Rice Varieties
    Yeotae Yun, Gyucheol Kim, Giwon Cho, Tugsang Yun
    Agronomy.2023; 13(5): 1195.     CrossRef
  • “Yeoreumi,” an Early Maturing Rice Cultivar Adaptable for Early-Transplanting Cultivation in the Chungnam Plain Area
    Yeotae Yun, Gyucheol Kim, Giwon Cho, Chongtae Chung, Tugsang Yun
    Korean Journal of Breeding Science.2022; 54(4): 405.     CrossRef
  • ‘Bbareumi’, an Extremely Early-Maturing Rice Cultivar Adaptable for Early Transplanting, in the Chungnam Plain Area
    Yeotae Yun, Chongtae Chung, Gyucheol Kim, Tugsang Yun
    Korean Journal of Breeding Science.2022; 54(3): 238.     CrossRef
  • Changes in Growth and Quality Traits According to Transplanting Dates using ‘Bbareumi’, an Extremely Early Maturing Rice Cultivar, in the Chungnam Plain Area
    Yeotae Yun, Gyucheol Kim, Giwon Cho, Tugsang Yun
    Korean Journal of Breeding Science.2022; 54(4): 305.     CrossRef
  • Development of an expert vision-based system for inspecting rice quality indices
    S.H. Payman, A. Bakhshipour, H. Zareiforoush
    Quality Assurance and Safety of Crops & Foods.2018; 10(1): 103.     CrossRef
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