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"Gene diversity"

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"Gene diversity"

Research Articles
Genetic Diversity Analysis and Molecular Screening for Salinity Tolerance in Wheat Germplasm
Muhammad Abdul Hannan, Nihar Ranjan Saha, Swapan Kumar Roy, Sun-Hee Woo, Muhammad Shahidul Haque
Plant Breed. Biotech. 2021;9(3):185-198.   Published online September 1, 2021
DOI: https://doi.org/10.9787/PBB.2021.9.3.185

Salinity is the most significant constraint to wheat cultivation in the salinity-affected areas. Saline-prone soils can be brought under cultivation by the development of salt-tolerant lines through molecular breeding aided by diversity analysis and molecular screening. The study aimed to screen for salinity tolerance and elucidate the extent of diversity among 75 wheat varieties and accessions. This molecular analysis and detection used 21 linked SSR markers. The study identified 202 alleles in 75 genotypes of wheat, giving 9.6 alleles on an average for salt tolerance screening. The mean polymorphism information content (PIC) of 0.7599 and the Nei’s (1973) gene diversity of 0.7856 were recorded. The accessions possess higher gene diversity and PIC than the cultivars. The average genetic similarity matrix coefficient was 0.60 within the range of 0.19 and 1.00. Similarity indices based UPGMA cluster analysis separated the 75 germplasm into six clusters. Eight genotypes grouped in sub-cluster Ib together with the positive control BINA Gom-1. Therefore, these eight genotypes were identified as potential salt-tolerant by molecular analysis using SSR markers linked to salinity. The gene diversity estimated, and the germplasm identified as potential salt-tolerant are promising for use in wheat breeding to incorporate salt tolerance in novel cultivars by marker-assisted breeding.

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  • Correlation of Root System Architecture at Early Seedling Stage and Coleoptile Length and Grain Properties of Korean Wheat Cultivars
    Kyeong-Min Kim, Sumin Hong, Myung-Goo Choi, Changhyun Choi, Myoung Hui Lee, Mira Yoon, Chon-Sik Kang, Ki-Chang Jang, Youngjun Mo, Chul Soo Park
    Korean Journal of Breeding Science.2024; 56(2): 113.     CrossRef
  • Evaluation of Cold Resistance at Seedling Stage for 70 Peanut Genotypes Based on Photosynthetic Fluorescence Characteristics
    Linmei Ye, Tao Wang, Renye Wu, Conghui Zheng, Liuqi Zhan, Jianhong Chen, Shengyao Guo, Yongkuai Chen
    Agronomy.2024; 14(8): 1699.     CrossRef
  • Microsatellite marker-based genetic diversity assessment among exotic and native maize inbred lines of Bangladesh
    Md. Amraul Islam, Md. Shahidul Alam, Md. Maniruzzaman, Muhammad Shahidul Haque
    Saudi Journal of Biological Sciences.2023; 30(8): 103715.     CrossRef
  • Research Advances in Diversity of Wheat Genetic Resources
    Do Yoon Hyun, Jae Yoon Kim
    Korean Journal of Breeding Science.2023; 55(4): 350.     CrossRef
  • Screening of salt-tolerant wheat (Triticum aestivum L.) through morphological and molecular markers
    Md. Hasanuzzaman, Nihar Ranjan Saha, Sayma Farabi, Md. Tahjib-Ul-Arif, Sabina Yasmin, Muhammad Shahidul Haque
    Cereal Research Communications.2023; 51(1): 87.     CrossRef
  • Effects of Exogenous Calcium on Adaptive Growth, Photosynthesis, Ion Homeostasis and Phenolics of Gleditsia sinensis Lam. Plants under Salt Stress
    Yun Guo, Yang Liu, Yan Zhang, Jia Liu, Zarmina Gul, Xiao-Rui Guo, Ann Abozeid, Zhong-Hua Tang
    Agriculture.2021; 11(10): 978.     CrossRef
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Genetic Variation of Common Millet (Panicum miliaceum L.) Collected from East Asia Based on Simple Sequence Repeats (SSRs)
Sang-Yun Han, Kyu Jin Sa, Ju Kyong Lee
Plant Breed. Biotech. 2020;8(2):186-195.   Published online June 1, 2020
DOI: https://doi.org/10.9787/PBB.2020.8.2.186

This study was conducted to evaluate the genetic variation for 75 accessions of common millet collected from Korea, Japan, and China. Genetic diversity analysis was performed on 75 accessions from Korea, Japan, and China using 9 SSR primers. A total of 30 alleles was identified with an average of 3.33 alleles per locus. The GD values measured in these groups ranged from 0.127 to 0.377 with an average of 0.266. The PIC values ranged from 0.124-0.347 with an average of 0.245. The Chinese common millet accessions showed higher genetic diversity than the Korean and Japanese accessions. From the analysis of population structure using the software program STRUCTURE 2.2, the 75 common millet accessions divided into two groups because the highest value of ΔK values was revealed for K = 2. Group I included 40 Korean accessions, and Group II included 14 Korean accessions, 12 Japanese accessions, and 9 Chinese accessions. The UPGMA phylogenetic tree revealed that the 75 common millet accessions were clustered into three major groups. The clustering patterns did not permit any clear distinction of the accessions of common millet collected in East Asia. The results of genetic diversity, genetic relationships, and population structure in the 75 common millet accessions from Korea, Japan, and China identified in this study will provide useful information for the development of common millet breeding lines and breeding programs and also genetic resource conservation strategies in Korea.

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  • Development of iron and zinc transporter based genic SSR markers in foxtail millet and their cross- genera transferability in little millet
    Kumari Anjani, Kaushal Kumar, V. K. Sharma
    Cereal Research Communications.2026; 54(2): 875.     CrossRef
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