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"Cold stress"

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"Cold stress"

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A Quick and Simple In-house Screening Protocol for Cold-Tolerance at Seedling Stage in Rice
Hasina Khatun, Partha S Biswas, Hung Goo Hwang, Kyung-Min Kim
Plant Breed. Biotech. 2016;4(3):373-378.   Published online August 31, 2016
DOI: https://doi.org/10.9787/PBB.2016.4.3.373

Cold stress is an emerging threat for rice production in Bangladesh particularly in Boro season (winter rice) at seedling stage. Cold stress during seedbed stage or early establishment stage at the main field induces severe seedling mortality that increases cost cultivation and delays crop establishment and ultimately entails into low yield. Development of sustainable cold tolerant high yielding rice varieties warrants an efficient and economic screening technique of germplasms and breeding population. The protocols for cold screening that so far have been used by the breeders and reported in literature are generally dependent on natural cool temperature and/or expensive climate chamber. In this paper, we report an in-house screening protocol that requires less than three weeks to complete the screening cycle and can be used all year round for mass screening of breeding population.

Citations

Citations to this article as recorded by  
  • Stage-specific screening reveals differential resilience response to cold stress in rice
    Fahamida Akter, Partha S. Biswas, Abul Kalam Mohammad Aminul Islam, Mohammad Sharif Raihan, Md. Mizanur Rahman, Khandakar Md. Iftekharuddaula, Mohammad Rafiqul Islam, John Damien Platten, Md Ashrafuzzaman
    PLOS One.2026; 21(4): e0338290.     CrossRef
  • Effects of low-temperature stress at different growth stages on rice physiology, pollen viability and yield in China’s cold region
    Lifeng Guo, Xiaodong Du, Jianing Chang, Jingjin Gong, Zheng Chu, Jiajia Lv, Lixia Jiang, Xi Liang
    PLOS One.2025; 20(8): e0329441.     CrossRef
  • Development of a Seedling Screening Method for Low-Temperature Tolerance in Pumpkin (Cucurbita moschata) and Selection of the Tolerant Resources for Rootstock of Cucumber
    Chae-Rin You, Hemasundar Alavilli, Kihwan Song
    Plant Breeding and Biotechnology.2022; 10(2): 102.     CrossRef
  • Contribution of IR20 and IR64 in Developing Three Bangladeshi Popular Rice Cultivars
    MM Emam Ahmed, Avijit Biswas, Sadia Afrin
    Plant Breeding and Biotechnology.2022; 10(2): 81.     CrossRef
  • Phenotypic and Molecular Characterization of Rice Genotypes’ Tolerance to Cold Stress at the Seedling Stage
    Nasira Akter, Partha Sarathi Biswas, Md. Abu Syed, Nasrin Akter Ivy, Amnah Mohammed Alsuhaibani, Ahmed Gaber, Akbar Hossain
    Sustainability.2022; 14(9): 4871.     CrossRef
  • Genome-Wide Association Study Reveals the Genetic Basis of Chilling Tolerance in Rice at the Reproductive Stage
    Byeong Yong Jeong, Yoonjung Lee, Yebin Kwon, Jee Hye Kim, Tae-Ho Ham, Soon-Wook Kwon, Joohyun Lee
    Plants.2021; 10(8): 1722.     CrossRef
  • Responses of Grain Yield and Yield Related Parameters to Post-Heading Low-Temperature Stress in Japonica Rice
    Iftikhar Ali, Liang Tang, Junjie Dai, Min Kang, Aqib Mahmood, Wei Wang, Bing Liu, Leilei Liu, Weixing Cao, Yan Zhu
    Plants.2021; 10(7): 1425.     CrossRef
  • Mapping and validation of QTLs for cold tolerance at seedling stage in rice from an indica cultivar Habiganj Boro VI (Hbj.BVI)
    Partha S. Biswas, Hasina Khatun, Nomita Das, Md. Mahathir Sarker, M. Anisuzzaman
    3 Biotech.2017;[Epub]     CrossRef
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Research Article
Differential Expression Screening of Defense Related Genes in Dormant Buds of Cold-Treated Grapevines
Seon Ae Kim, Soon-Young Ahn, Jae Hyun Han, Seung Heui Kim, Jung Ho Noh, Hae Keun Yun
Plant Breed. Biotech. 2013;1(1):14-23.   Published online March 31, 2013
DOI: https://doi.org/10.9787/PBB.2013.1.1.014

Grape (Vitis spp.), which is an important economic fruit crop worldwide, is the fourth most common fruit produced in Korea. Low temperature is one of the most important environmental factors that affect the successful cultivation of grapes. To screen for specific expression of abiotic stress-related genes against cold treatment in ‘Campbell Early’ and ‘Muscat Bailey A’ grapevines, the expression of various defense-related genes was investigated by real-time PCR and semi-quantitative RT-PCR. Among 67 genes analyzed by real-time PCR and RT-PCR, 43 and 10 were found to be up-regulated, while 4 and 37 were down-regulated in low temperature treated ‘Campbell Early’ and ‘Muscat Baily A’ grapevines, respectively. Genes encoding cold induced protein (CIP), lipoxygenase (LOX), glutathione S-transferase (GST), polygalacturonase-inhibiting protein (PGIP), and cold acclimation specific protein (CAS15A) were up-regulated, while those encoding cinnamyl alcohol dehydrogenase 2 (CAD2) and cold acclimation protein (WCS120) were down-regulated by low temperature treatment in both ‘Campbell Early’ and ‘Muscat Bailey A’. These changes in gene expression showed that defense response-related genes for cold acclimation were induced and wheat cold-specific gene decreased in grapevines. Among tested genes, the transcript levels of CLP, cell wall protein (CW), TIP, TLP, and WRKY transcription factor 10 (WRKY10) increased considerably in response to low temperature in ‘Campbell Early’ grapevine. These findings suggest that differentially expressed genes could be utilized as candidates for useful genetic resources and molecular markers after additional confirmation in various grapevine cultivars treated with low temperature in breeding programs for grapes with cold-tolerance.

Citations

Citations to this article as recorded by  
  • Changes in cold tolerance and biochemical responses to air temperature parameters: A case study of three commercial grapevine buds
    Gülhan Gülbasar Kandilli, Serkan Candar, Gökhan Söylemezoğlu
    Scientia Horticulturae.2025; 341: 113964.     CrossRef
  • Evaluation of the dual role of chlorine dioxide as an antimicrobial agent and defense elicitor against Botrytis cinerea in grapevines
    Srinivasan Ramalingam, Soon Young Ahn, Zar Le Myint, Hee Young Jung, Seung Yeol Lee, Jung A Ryu, Sang-Min Lee, Hae Keun Yun
    Horticulture, Environment, and Biotechnology.2024; 65(6): 957.     CrossRef
  • Profiling the lncRNA–miRNA–mRNA interaction network in the cold-resistant exercise period of grape (Vitis amurensis Rupr.)
    Weifeng Ma, Lijuan Ma, Zonghuan Ma, Wenfang Li, Shixiong Lu, Huimin Gou, Juan Mao, Baihong Chen
    Chemical and Biological Technologies in Agriculture.2024;[Epub]     CrossRef
  • UV-C treatment elicits resistant responses against Botrytis cinerea infection and the improvement of fruit characteristics in grapevines
    Srinivasan Ramalingam, Zar Le Myint, Soon Young Ahn, Jung A. Ryu, Sang-min Lee, Hae Keun Yun
    Horticulture, Environment, and Biotechnology.2024; 65(4): 707.     CrossRef
  • The polygalacturonase-inhibiting protein PpPGIP1, positively regulates vacuolar invertase activity via a protein-protein interaction with PpVIN2 in peach fruit
    Yingying Wei, Yihui Mao, Yinli Gao, Yi Chen, Jiachang Sun, Xingxing Wang, Shu Jiang, Feng Xu, Hongfei Wang, Xingfeng Shao
    Scientia Horticulturae.2023; 320: 112209.     CrossRef
  • An overview of drought stress in grapevine
    Muhammad Abi Waqas, Amina Shahid, Fatima Rasool, Ahmar Bashir, Zarnain Raheem
    Journal of Horticultural Science & Technology.2021; : 128.     CrossRef
  • Transcriptome analysis of grapevine shoots exposed to chilling temperature for four weeks
    Seon Ae Kim, Soon Young Ahn, Hae Keun Yun
    Horticulture, Environment, and Biotechnology.2016; 57(2): 161.     CrossRef
  • Transcriptomic analysis of ‘Campbell Early’ and ‘Muscat Bailey A’ grapevine shoots exposed to freezing cold stress
    Seon Ae Kim, Hae Keun Yun
    Journal of Plant Biotechnology.2016; 43(2): 204.     CrossRef
  • Current status and prospects of genomics and bioinformatics in grapes
    Youn Young Hur, Sung Min Jung, Hae Keun Yun
    Journal of Plant Biotechnology.2015; 42(4): 298.     CrossRef
  • 16 View
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  • 9 Crossref