
List of primer and probe sequences used in HRM assay of SNPs.
HRM Marker | Primer (5’-3’) | ||
---|---|---|---|
Forward | Reverse | Probea) | |
CMo-A01P | AGTCTTCAGTGCCAACGGTGATTC | ATGGGTTTTGGAGGAGATTCTTATC | AGATTGGCAGGCAAACCATGAGCAT |
CMo-A02P | ATTGCCAAAATGCCATTAAGTAAGC | GTTGTAGTTTTAGCTGCTGCTCTCA | CTGCAAATCTTACCTCTGAGGTGTTT |
CMo-A03P | ATTATAGAACATGATATGCTGCCCAC | TCCCTTACGCTATCACTTGTTTGTTAA | ACATTCACAAATCTCAGCATCATCC |
CMo-A04P | GTCCACCAACCCATTATGCTTTGAA | AAGAGGCAATAGTGGAAGAACTTG | AGCAAGGTGGAGAGGATTGTTTCCA |
CMo-A05P | TGAGCAGCTCTTCAACCTCTTCGAA | TGCTGCAGTTTCAAATTGGGTTTCA | AGGAATGTACCAGCAGCGCCGAGA |
CMo-A06P | AGCAGCAATGTTGGCAGTGGCAAA | TTCCCATGTTGACCTCAATGTCCT | AAGGCACCAATGCCTAAACCTCGCA |
CMo-A07P | GATGAAGTTTCTTCAAGAACTAGTCC | GACATAGTTAATGATTTCGTCTAGCA | TCACATCAATTCGCTCGATTAAAGTT |
CMo-A08P | TTGAAGTCCATGCAGCCCTTGTT | CTGTTCTTCAGCCTCAATGTGGAT | AGACCATTTCTCTCCCTCAATCACT |
CMo-A09P | TGAAACTGTGTAAACTGGCTGCTCT | CATGTTGGATTTAAGAAATGGAAGAAG | TTCAAGAGGAATTGGGTCTGAAGAA |
CMo-A10P | CAATTGGAGAAAGGGTTTCGCG | AGCAGCAGCGGAATGAAGTTGA | TTGAAGAACTCGATTCCCTCGAGAG |
CMo-A11P | CTTATATGTGCATGGAGAAACGGC | CATGAGAGAAATGATGAAAGGACAG | TCCCTAAAACCTTAACCTCTTTCAG |
CMo-A12P | GCGGTTGTTACTCATATAATGAGAAG | GAGCATCTGCAGCAAGTTCTCTC | TGTTTTCCCTTTGTTTGGGGTTGTT |
CMo-A13P | GAGGTTGCACATCGGCTAGGT | CTGCAGCAAGACCTATAGGATTTGA | GAGAAGAGGCTTGATCCACAAAGTT |
CMo-A14P | ATGTCAAATAAATCTGTCTCGACGC | TGGAATGGATAATCTAGAGCTACAG | TCTGGAAATGCCGAACTTTTGATACT |
CMo-A15P | CGGCATTGTCGAGAGATATCGA | ATCGTGAAGAACTCCATAATGGCT | ACCGATAAGCTTCGCATTCCTGTTG |
CMo-A16P | TGTACTTTCATGGAAGCTGGCGTT | TGACGGTTCGGAGGTTGGAGA | TACGGAAGATGTGCAAAGACGCCAT |
CMo-A17P | GTGATATAATTCCAGTAATTTGCAGC | TTGCCCATTCTATTGCAGCTATAG | TTCATCCTACGCCCATCGGTTCAT |
CMo-A18P | TCTTGATCTCTTCCATTCTGGATC | GATGAAGCAAGCGAAATTGCTACA | TCTACGTCTTATATAGATTCTGACACG |
CMo-A19P | GCAGCTATCTAAGAAGGCTAAATATC | ATGATTCGAAGAAACTGCCGAATTAGT | TCCTTCTTTGGTTGGTGCAATGTGC |
CMo-A20P | CCGAAACTCAACGTCAAATAATGTG | ACGGAGAGCGAAGGGCTAAATTT | TCAAGTCTTTTCCCCACCATCCAAT |
CMo-A21P | TGATTGCGAAATAGTCTTTCGTTGC | TCTTGTTCAGCGTTCGAGTATCGA | GACTCGACGACGGTCACGATGA |
CMo-A22P | TGCTTATCAGAGTGGCATTTATTCTG | GAGCTTAGTAAGAATGGTGATTAGAAC | AGACATACCGTCCTGTACAGTAAGA |
CMo-A23P | GAAGCTTACAAACGGGTATGCAGA | ATATGTAGTGTTCTTGATAGTGTTAAT | GTGACAAAGACGCTGCCATTGTCTT |
CMo-A24P | CTCACTTAAGAGGATCCAGGGTG | TGCCTTGAACACCAATGTTGCCTT | CATGACAGCATGAAAAGCATTCTCTG |
CMo-A25P | TACGAGTCGCATTTCTTGACCG | ACGAAGTTAGCACAGTAATAGTCATC | TTAGGTCATTTCTGACTTTGATGCTAG |
CMo-A26P | CTGTCAACTGTTTGAATACTCGGG | GTACCTAACAGTTGAAGAATCTCCA | TGGACCAGAAATGCAAGAAATGGAG |
CMo-A27P | CATGTGAGCTGCTGTGGACGATT | ACAAGCGAAAGACTTCATAGCAGATAT | AGGAATAGATCTAAGCTGAATGGCT |
a)Bold indicates SNP.