
List of SNPs used in ‘Fluidigm SNP Genotyping’ assays.
SNP Marker Name | Chromosome | Location (bp) | SNP [Ref/Alt] | SNP (color of dye)a) |
---|---|---|---|---|
CMo-A01 | 1 | 3,318,442 | …CAA[A/G]CCA… | A(F):G(H) |
CMo-A02 | 1 | 9,837,040 | …TCT[G/A]AGG… | G(F):A(H) |
CMo-A03 | 2 | 8,873,265 | …CTC[A/G]GCA… | A(F):G(H) |
CMo-A04 | 2 | 10,378,972 | …GAG[G/A]ATT… | G(F):A(H) |
CMo-A05 | 3 | 5,724,100 | …AGC[G/C]CCG… | G(F):C(H) |
CMo-A06 | 3 | 6,119,169 | …AGG[T/C]TTA… | T(F):C(H) |
CMo-A07 | 4 | 8,389,880 | …CTC[G/A]ATT… | G(F):A(H) |
CMo-A08 | 4 | 20,447,172 | …TCC[C/T]TCA… | C(F):T(H) |
CMo-A09 | 6 | 3,712,655 | …TTG[G/A]GTC… | G(F):A(H) |
CMo-A10 | 6 | 11,115,368 | …TTC[C/T]CTC… | C(F):T(H) |
CMo-A11 | 8 | 2,798,704 | …AGG[T/G]TAA… | T(F):G(H) |
CMo-A12 | 8 | 6,252,977 | …AAA[C/A]AAA… | C(F):A(H) |
CMo-A13 | 10 | 6,646,259 | …GCT[C/T]GAT… | C(F):T(H) |
CMo-A14 | 11 | 4,451,324 | …GCC[G/A]AAC… | G(F):A(H) |
CMo-A15 | 13 | 8,296,803 | …GAA[C/T]GCG… | C(F):T(H) |
CMo-A16 | 15 | 1,475,799 | …TGT[G/C]CAA… | G(F):C(H) |
CMo-A17 | 15 | 9,704,446 | …GGG[T/C]GTA… | T(F):C(H) |
CMo-A18 | 16 | 1,782,015 | …TAT[G/A]TAG… | G(F):A(H) |
CMo-A19 | 16 | 3,290,808 | …TTG[G/T]TGC… | G(F):T(H) |
CMo-A20 | 16 | 8,018,335 | …GGG[G/T]AAA… | G(F):T(H) |
CMo-A21 | 17 | 2,812,397 | …GAC[G/A]GTC… | G(F):A(H) |
CMo-A22 | 17 | 10,502,431 | …TCC[C/T]GTA… | C(F):T(H) |
CMo-A23 | 18 | 1,876,608 | …CAG[G/A]TCT… | G(F):A(H) |
CMo-A24 | 18 | 3,666,538 | …TTT[C/G]ATG… | C(F):G(H) |
CMo-A25 | 18 | 10,701,307 | …TCT[C/G]ACT… | C(F):G(H) |
CMo-A26 | 20 | 3,466,354 | …TGC[C/A]AGA… | C(F):A(H) |
CMo-A27 | 20 | 4,075,437 | …CTA[G/A]GCT… | G(F):A(H) |
a)F: FAM dye, H: HEX dye.