Sequences of gene primers used in this study, and information about the roles of encoded proteins in the salt tolerance of sorghum.
Gene type | Genes | Forward (5’-3’) | Reverse (5’-3’) | Name/reported genes |
---|---|---|---|---|
Heat shock protein | Sb07g028370 | TCTGCACTGATCACCGTCTC | GAACGTACCCTTACCGACGA | 25.3 kDa heat shock protein, chloroplastic (Precursor) (Johnson |
Sb01g040030 | GACGGCAACATCCTTCAGAT | GCTTCTTGACGTCCTCCTTG | 17.9 kDa class I heat shock protein (Johnson |
|
Sb04g006890 | ATGGCTTTAGCTCGCCTGT | AAATCTGTCTCCGGGGCTAC | 23.6 kDa heat shock protein, mitochondrial (Zhang |
|
Sb04g035130 | ACCGTGTGCTGGTGATGAA | CTGCACGGACTTGGTCTTCT | 18.6 kDa class III heat shock protein (Zhang |
|
Sb01g021170 | AGTGGTGCCACTTCACCAA | GGCACCTGGATGTAGAGCAT | 16.6 kDa heat shock protein (Schnable |
|
Aquaporin | Sb04g032900 | CAACAACCTCCGCTACAACA | AAGGTGATGATGATCTCGAAC | Aquaporin TIP2-1 (Zhang |
Sb04g037800 | CAACAACCTCCGCTACAACA | AAGGTGATGATGATCTCGAAC | Aquaporin PIP1-5 (Liu |
|
Sb0012s010440 | TTCCTCTACGTGACGGTGCT | CAGTAGACGAGCGCGAAGAT | Aquaporin PIP2-2 (Guo |
|
Sb07g003270 | ATCCCCATGCAGTGAAAGAG | TTGCCACCATGTAGATCCAA | Aquaporin NIP3-2 (Almodares and Hadi 2009) | |
Sb05g007520 | CGTCCATGAACCCAGCTAAT | CCCTAAAAATCCATCCAGCA | Aquaporin SIP1-1 (Almodares and Hadi 2009) | |
ROS scavenging system | Sb02g000490 | CTTCCACGATTTCACCGTCT | TGACGACGTTGCACTTTCTC | Peroxidase 1 (Precursor) (Mizuno |
Sb10g030840 | ACCCAAAGACCAATTTGCAG | CCCTCCATGTGCCTGTAGTT | Catalase isozyme 1 (Li |
|
Sb03g045840 | CATTCTGGAGGACCTCTTCG | CGGCTTGGTAAGCTTGTTCT | Probable glutathione S-transferase (Bandara |
|
Sb04g030050 | TCTTCCGTAACAAGCCCATC | CGGTGGATGATGTAGACGTG | Thioredoxin reductase NTRB (Forghani |
|
Sb03g010900 | GCATTCTGGCAAACCTGATT | TTCCCGAGACTTCTGAGCAT | TPR repeat-containing thioredoxin TTL1 (Ndimba 2017) | |
Transcription factor | Sb01g044410 | CGGCTACGACGATAGATTGG | CTGCAGCTGGAGAATCTGTG | Ethylene-responsive transcription factor RAP2-4 (Yan |
Sb03g030750 | CTAGCGACGACTGATCACCA | GCCTGGTTGTAGCCGATTAG | NAC domain-containing protein 8 (Handakumbura 2014) | |
Sb03g005480 | CTTGAGCAGCACCAGCATAG | AAGCTCGATCGGTTCATCAT | Transcription factor ASG4 (Saha |
|
Sb10g007090 | GAGGTGGCAAAACTCAAGGA | CTTTGCCTTTGGTCCATGTT | bZIP transcription factor TRAB1 (Yang |
|
Sb08g018580 | TGGAGGACACACATGAGGAA | CCCTTGAGGATGCTTGTGAT | MYB59 [Zea mays] (Muthamilarasan |