Plant Breeding and Biotechnology

Indexed in /covered by CAS, KoreaScience & DOI/Crossref:eISSN 2287-9366   pISSN 2287-9358

Table. 3.

Table. 3.

Detection of stem trait QTLs based on a high-resolution genetic map by Lee et al. (2020).

Traitz) Chr QTL name Position (cM) Genetic interval (cM) LOD PVEy) Additive effectx)
1IL 1 q1IL1 163.3 162.5-164.1 13.14 20.65 ‒2.16
5 q1IL5 81.2 78.5-82.0 12.68 19.63 2.19
9 q1IL9 45.3 44.4-46.5 45.31 4.64 ‒1.02
2IL 1 q2IL1.1 162.3 162.0-163.0 26.24 51.1 ‒2.60
1 q2IL1.2 168.8 167.5-169.3 23.14 46.88 ‒2.51
8 q2IL8 8.2 5.7-9.4 3.53 4.17 0.74
3IL 1 q3IL1 163.3 163.0-163.9 30.07 49.92 ‒2.78
5 q3IL5 186.3 170.6-196.3 5.48 12.35 1.41
4IL 1 q4IL1.1 154.5 154.1-154.8 8.43 15.74 ‒1.40
1 q4IL1.2 164.2 163.4-167.4 28.81 41.18 ‒2.19
10 q4IL10 54 53.1-55.4 3.75 3.67 ‒0.66
1ID 1 q1ID1 25.1 24.5-26.3 5.01 8.93 0.09
5 q1ID5.1 72.1 70.9-72.8 7.66 15.45 0.12
5 q1ID5.2 77.8 77.5-78.5 11.02 21.24 0.14
6 q1ID6 5.2 1.4-8.4 4.54 8.5 0.09
2ID 1 q2ID1 25.1 24.4-25.4 3.83 7.33 0.12
4 q2ID4 344.5 343.9-345.7 3.95 7.43 0.12
5 q2ID5.1 62.4 62.0-63.0 4 7.87 0.12
5 q2ID5.2 72.1 70.6-72.8 5.47 10.53 0.14
3ID 5 q3ID5 73.1 71.9-73.4 5.77 10.86 0.16
8 q3ID8 91.9 90.9-94.6 4.61 8.57 0.15
10 q3ID10 84.2 82.3-100.4 3.36 6.3 ‒0.12
4ID 1 q4ID1.1 40.9 39.6-41.3 4.13 8.08 0.16
1 q4ID1.2 49.7 48.2-51.7 4.94 9.56 0.18
4 q4ID4.1 293.1 292.3-295.2 4.82 9.36 ‒0.18
4 q4ID4.2 305.6 303.4-306.9 3.39 6.72 ‒0.15
CL 1 qCL1 163.3 162.6-163.9 40.88 57.5 ‒10.71
5 qCL5.1 72.8 72.1-73.3 7.97 7.34 4
5 qCL5.2 80.9 80.4-81.2 11.15 9.84 4.97
6 qCL6 0 0.0-0.9 5.68 4.62 3.04

z)First internode length (1IL, cm), second internode length (2IL, cm), third internode length (3IL, cm), fourth internode length (4IL, cm), first internode diameter (1ID, mm), second internode diameter (2ID, mm), third internode diameter (3ID, mm), fourth internode diameter (4ID, mm) and culm length (CL, cm).

y)Percentage of phenotypic variation explained by the QTL.

x)Additive effect, negativeand positive values of the additive effect indicated alleles from ‘Milyang23’ and ‘Giho’, with increasing trait score, respectively.

Plant Breed. Biotech. 2021;9:298-309 https://doi.org/10.9787/PBB.2021.9.4.298
© 2021 Plant Breed. Biotech.