Plant Breeding and Biotechnology

Indexed in /covered by CAS, KoreaScience & DOI/Crossref:eISSN 2287-9366   pISSN 2287-9358

Table. 3.

Table. 3.

Enriched DEGs detected from bar-knockout transgenic rice group compared to the recipient herbicide-resistant line Ba15.

SEQ_ID Log2 fold changes Descriptions GO termsz) TAIRy)

R9-15-4 R9-20-2 R6-2-4
Bar −12.263 −12.419 −13.009 A bialaphos-resistantgene - TALEN-target
Os03t0392600-01 −9.128 −8.358 −8.999 Peptidase S10, serine carboxypeptidase family protein CC AT2G27920
Os09t0358000-00 −8.633 −6.202 −8.516 Similar to OsD305 CC AT1G51890
Os11t0695000-01 −7.744 −7.639 −6.600 Similar to Leucine Rich Repeat family protein CC AT3G47570
Os09t0356800-01 −7.271 −3.446 −7.168 Protein kinase, core domain containing protein CC AT1G51850
Os11t0514500-01 −6.766 −8.222 −6.396 Sorghum bicolor leucine-rich repeat-containing extracellular glycoprotein precursor CC AT5G21090
Os02t0483000-00 −6.648 −5.603 −5.616 Similar to fasciclin-like arabinogalactan protein 8 CC AT3G12660
Os11t0641500-01 −4.364 −4.436 −5.929 Cupredoxin domain containing protein CC AT3G09220
Os03t0184550-01 −3.596 −2.900 −2.921 Similar to Dihydroflavonol-4-reductase CC AT4G33360
Os10t0343400-01 −3.207 −3.590 −2.886 Cellulose synthase family protein CC AT3G03050
Os10t0142600-00 −2.762 −3.686 −4.315 Protein kinase, catalytic domain domain containing protein CC, MF AT1G21270
Os02t0740700-01 −2.512 −3.015 −2.516 Peptidase M10A and M12B, matrixin and adamalysin family protein CC AT1G24140
Os11t0115350-01 −2.227 −3.853 −3.681 Similar to Non-specific lipid-transfer protein 2 CC AT2G38540
Os12t0228700-00 −2.156 −3.158 −3.029 Similar to 32 kDa protein CC AT1G73040
Os04t0175600-01 2.005 2.702 2.029 Similar to o-methyltransferase (EC 2.1.1.6) (Fragment) CC AT5G54160
Os12t0583300-01 2.390 2.923 2.099 Peptidase aspartic, catalytic domain containing protein CC AT2G03200
Os05t0318700-01 2.527 3.501 4.265 Similar to Resistance protein candidate (Fragment) CC AT3G51550
Os09t0339000-01 2.718 4.084 2.400 Protein kinase, core domain containing protein CC AT5G10530
Os11t0605100-01 3.197 4.683 5.049 NB-ARC domain containing protein CC AT3G14470
Os02t0111600-01 3.245 3.698 2.199 Serine/threonine protein kinase-related domain containing protein CC, MF AT1G21230
Os12t0431100-01 3.366 2.913 2.211 ATPase, AAA-type, core domain containing protein CC AT5G40010
Os07t0539900-01 3.497 3.157 2.956 Similar to Beta-1,3-glucanase-like protein CC, MF AT4G26830
Os01t0944500-00 3.682 3.588 3.094 Glycoside hydrolase, family 17 domain containing protein CC, MF AT3G57240
Os01t0660200-01 3.759 4.487 2.663 Acidic class III chitinase OsChib3a precursor (Chitinase) (EC 3.2.1.14) CC AT5G24090
Os06t0566300-00 3.867 2.056 2.389 Similar to zinc transporter 4 CC AT1G10970
Os01t0713200-01 4.312 3.960 2.744 Similar to Beta-glucanase MF AT3G57260
Os06t0143950-00 4.396 5.334 6.007 Non-protein coding transcript CC AT1G79990
Os02t0550800-01 4.446 4.496 3.998 Ammonium transporter family protein CC AT2G38290
Os12t0628600-01 4.760 3.073 2.335 Similar to Thaumatin-like pathogenesis-related protein 3 precursor CC AT4G11650
Os07t0131375-00 6.228 5.106 5.720 Protein kinase, catalytic domain domain containing protein CC AT2G37710
Os11t0214700-00 7.629 3.431 3.181 Plant disease resistance response protein domain containing protein CC AT5G42510
Os01t0382000-01 8.453 6.368 6.203 Similar to Pathogenesis-related protein PRB1-2 precursor CC AT4G33720

z)CC, cellular component; MF, molecular function.

y)Means The Arabidopsis Information Resource.

Plant Breed. Biotech. 2021;9:32-44 https://doi.org/10.9787/PBB.2021.9.1.32
© 2021 Plant Breed. Biotech.