Plant Breeding and Biotechnology

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Table. 4.

Table. 4.

Candidate genes associated with the flowering time in cowpea.

Chr. SNP Gene Location (bp) Gene description Flowering function Reference
1 2_54398 Vigun01g084000 23841489..23844362 Protein FLOWERING LOCUS T/Phosphatidylethanolamine-binding proteinz) Regulation of flowering time Wickland and Hanzawa 2015
Vigun01g084400 23914471..23916601 PPR repeat Expression in flowering Saha et al. 2007
Vigun01g085000 24039903..24041896 No apical meristem (NAM) protein Control of flowering time Nuruzzaman et al. 2013
Vigun01g085500 24123050..24132785 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Regulation of flowering time Lorković and Barta 2002
2_43560 Vigun01g227200 39998036..39998455 PROTEIN EARLY FLOWERING 4z) Early flowering Khanna et al. 2003
Vigun01g229200 40176676..40177200 Ring finger domain Regulation of flowering time Du et al. 2016
Vigun01g229900 40232831..40236901 Leucine rich repeat N-terminal domain/Protein tyrosine kinase Expression in flowering Forsthoefel et al. 2005
Vigun01g230200 40253121..40256700 METHYLTRANSFERASE Regulation of flowering time Niu et al. 2007
2 2_06981 Vigun02g062600 20965948..20970544 F-BOX/KELCH-REPEAT PROTEIN SKIP11z) Established in circadian clock and flowering time regulation ul Hassan et al. 2015
Vigun02g063000 21055222..21057708 Homeobox associated leucine zipper Regulation of flowering time Tang et al. 2019
Vigun02g063300 21109190..21114863 Myb-like DNA-binding domain Expression in flowering Ambawat et al. 2013
Vigun02g064000 21245076..21247100 PPR repeat Expression in flowering Saha et al. 2007
Vigun02g064100 21250319..21252469 Ubiquitin-conjugating enzyme Regulation of flowering time Wang et al. 2016
3 2_23118 Vigun03g295800 48232939..48235720 Zinc finger, C3HC4 type (RING finger)/Predicted E3 ubiquitin ligase Regulation of flowering time Yang et al. 2015
Vigun03g296800 48322318..48325239 Casein kinase II regulatory subunitz) Regulation of flowering time Ogiso et al. 2010
5 2_06184 Vigun05g024100 1985451..1988773 PPR repeat Expression in flowering Saha et al. 2007
Vigun05g024300 2001441..2005611 Protein kinase domain/Leucine rich repeat N-terminal domain Expression in flowering Forsthoefel et al. 2005)
8 2_54082 Vigun08g218000 37770920..37773229 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Regulation of flowering time Lorković and Barta 2002
Vigun08g220700 37932014..37935579 PPR repeat Expression in flowering Saha et al. 2007
Vigun08g220900 37944978..37948715 Zinc finger, C3HC4 type (RING finger)/E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED Regulation of flowering time Yang et al. 2015
Vigun08g222400 38033233..38033754 VQ motif Delayed flowering time Jing and Lin 2015
Vigun08g223500 38107101..38107802 C2H2-type zinc finger Flower development Gourcilleau et al. 2011

z)is known for the main flowering genes.

Plant Breed. Biotech. 2020;8:413-25 https://doi.org/10.9787/PBB.2020.8.4.413
© 2020 Plant Breed. Biotech.